MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-260B13
Chromosome	5 (Build37)
Map Location	103,443,061 - 103,443,347
singlet/doublet	singlet
Overlap gene	Mapk10
Upstream gene	Wdfy3, EG666515, EG666527, LOC625780, Arhgap24
Downstream gene	LOC666563, 4930429D17Rik, LOC100041039, 1700021F02Rik, LOC100041049, Ptpn13, Slc10a6, 1700016H13Rik, Aff1, Klhl8, Hsd17b13, EG666629, Hsd17b11
Link	Open Mouse BAC browser

Click to get alignment info.

name	Wdfy3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72145 MGI:1096875
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666515 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666515 MGI:3647556
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein

name	EG666527 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666527 MGI:3647707
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC625780 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625780
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Arhgap24 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231532 MGI:1922647
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Mapk10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26414 MGI:1346863
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC666563 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666563
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	4930429D17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74624 MGI:1921874
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100041039 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041039
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	1700021F02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75519 MGI:1922769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041049 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041049
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Ptpn13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19249 MGI:103293
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc10a6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75750 MGI:1923000
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700016H13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74218 MGI:1921468
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 2 Proteins

name	Aff1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17355 MGI:1100819
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Klhl8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:246293 MGI:2179430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hsd17b13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243168 MGI:2140804
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666629 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666629 MGI:3643346
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Hsd17b11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114664 MGI:2149821
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wdfy3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39930598 GeneID:72145 MGI:1096875
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat and FYVE domain containing 3 transcript_id : NM_172882.2

name	EG666515 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375018 GeneID:666515 MGI:3647556
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein product : predicted gene, EG666515 transcript_id : XM_984344.1

name	EG666527 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375020 GeneID:666527 MGI:3647707
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG666527 transcript_id : XM_984383.1

name	Arhgap24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30840989 GeneID:231532 MGI:1922647
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase activating protein 24 transcript_id : NM_029270.1

name	Arhgap24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375850 GeneID:231532 MGI:1922647
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase activating protein 24 transcript_id : NM_146161.2

name	Mapk10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125858478 GeneID:26414 MGI:1346863
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen activated protein kinase 10 transcript_id : NM_001081567.1

name	Mapk10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125858510 GeneID:26414 MGI:1346863
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen activated protein kinase 10 transcript_id : NM_009158.2

name	4930429D17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254134 GeneID:74624 MGI:1921874
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 4930429D17 gene transcript_id : XM_001477947.1

name	1700021F02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254136 GeneID:75519 MGI:1922769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700021F02 gene transcript_id : XM_001477958.1

name	LOC100041049 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254054 GeneID:100041049
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : hypothetical protein LOC100041049 transcript_id : XM_001475707.1

name	Ptpn13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134948761 GeneID:19249 MGI:103293
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase, non-receptor type 13 transcript_id : NM_011204.2

name	Slc10a6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802045 GeneID:75750 MGI:1923000
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 10 (sodium/bile acid cotransporter family), member 6 transcript_id : NM_029415.2

name	1700016H13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374981 GeneID:74218 MGI:1921468
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 2 Proteins product : RIKEN cDNA 1700016H13 gene, transcript variant 1 transcript_id : XM_132216.7

name	Aff1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248526 GeneID:17355 MGI:1100819
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : AF4/FMR2 family, member 1 transcript_id : NM_133919.3

name	Aff1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248528 GeneID:17355 MGI:1100819
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : AF4/FMR2 family, member 1 transcript_id : NM_001080798.1

name	Klhl8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366889 GeneID:246293 MGI:2179430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kelch-like 8 (Drosophila) transcript_id : NM_178741.3

name	Hsd17b13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37574135 GeneID:243168 MGI:2140804
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxysteroid (17-beta) dehydrogenase 13 transcript_id : NM_198030.1

name	Hsd17b11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131125 GeneID:114664 MGI:2149821
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxysteroid (17-beta) dehydrogenase 11 transcript_id : NM_053262.3

name	EG666515 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94375019 GeneID:666515 MGI:3647556
definition	codon_start : 1 product : hypothetical protein protein_id : XP_989438.1

name	EG666527 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94375021 GeneID:666527 MGI:3647707
definition	codon_start : 1 product : hypothetical protein protein_id : XP_989477.1

name	Arhgap24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30840990 CCDS:CCDS19474.1 GeneID:231532 MGI:1922647
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1 product : Rho GTPase activating protein 24 isoform 1 protein_id : NP_083546.1

name	Arhgap24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122687 CCDS:CCDS19475.1 GeneID:231532 MGI:1922647
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : Rho GTPase activating protein 24 isoform 2 protein_id : NP_666273.1

name	Mapk10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125858479 GeneID:26414 MGI:1346863
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004705 - JUN kinase activity [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004707 - MAP kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007254 - JNK cascade [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; SAPK/Erk/kinase 2; JNK3 beta1 protein kinase; JNK3 beta2 protein kinase product : mitogen activated protein kinase 10 isoform 2 protein_id : NP_001075036.1

name	Mapk10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125858511 GeneID:26414 MGI:1346863
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004705 - JUN kinase activity [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004707 - MAP kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007254 - JNK cascade [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; SAPK/Erk/kinase 2; JNK3 beta1 protein kinase; JNK3 beta2 protein kinase product : mitogen activated protein kinase 10 isoform 1 protein_id : NP_033184.2

name	4930429D17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254135 GeneID:74624 MGI:1921874
definition	codon_start : 1 product : hypothetical protein LOC74624 protein_id : XP_001477997.1

name	1700021F02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254137 GeneID:75519 MGI:1922769
definition	codon_start : 1 product : hypothetical protein LOC75519 protein_id : XP_001478008.1

name	LOC100041049 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254055 GeneID:100041049
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475757.1

name	Ptpn13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134948762 GeneID:19249 MGI:103293
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] codon_start : 1 note : tyrosine phosphatase product : protein tyrosine phosphatase, non-receptor type 13 protein_id : NP_035334.2

name	Slc10a6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313062 CCDS:CCDS19477.1 GeneID:75750 MGI:1923000
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008508 - bile acid:sodium symporter activity [Evidence IEA] GO_process : GO:0006814 - sodium ion transport [Evidence IEA] codon_start : 1 product : sodium-dependent organic anion transporter protein_id : NP_083691.1

name	1700016H13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20838043 GeneID:74218 MGI:1921468
definition	codon_start : 1 product : hypothetical protein LOC74218 isoform 1 protein_id : XP_132216.1

name	Aff1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248527 GeneID:17355 MGI:1100819
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence TAS] GO_process : GO:0006350 - transcription [Evidence TAS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; robotic; homolog of human MLLT2 unidentified product : myeloid/lymphoid or mixed-lineage leukemia translocated to 2 homolog isoform 2 protein_id : NP_598680.3

name	Aff1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248529 GeneID:17355 MGI:1100819
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence TAS] GO_process : GO:0006350 - transcription [Evidence TAS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; robotic; homolog of human MLLT2 unidentified product : myeloid/lymphoid or mixed-lineage leukemia translocated to 2 homolog isoform 1 protein_id : NP_001074267.1

name	Klhl8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520181 CCDS:CCDS19479.1 GeneID:246293 MGI:2179430
definition	codon_start : 1 product : kelch-like 8 protein_id : NP_848856.1

name	Hsd17b13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37574136 CCDS:CCDS19480.1 GeneID:243168 MGI:2140804
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : alcohol dehydrogenase PAN1B-like protein_id : NP_932147.1

name	Hsd17b11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716597 CCDS:CCDS19481.1 GeneID:114664 MGI:2149821
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA] codon_start : 1 note : retinal short-chain dehydrogenase/reductase SDR2; retinal short-chain dehydrogenase/reductase 2 product : dehydrogenase/reductase (SDR family) member 8 protein_id : NP_444492.1

name	LOC625780 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625780
definition	number : 2 pseudo : _no_value

name	LOC625780 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625780
definition	number : 1 pseudo : _no_value

name	LOC666563 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666563
definition	number : 1 pseudo : _no_value

name	LOC666563 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666563
definition	number : 2 pseudo : _no_value

name	LOC100041039 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041039
definition	number : 1 pseudo : _no_value

name	LOC100041039 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041039
definition	number : 2 pseudo : _no_value

name	LOC100041039 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041039
definition	number : 3 pseudo : _no_value

name	EG666629 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666629
definition	number : 1 pseudo : _no_value

name	EG666629 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666629
definition	number : 2 pseudo : _no_value

clone name	MSMg01-061M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329A21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-353D03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-131D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062K16
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-260B13.b
ACC	GA065106
length	825
definition	B6Ng01-260B13.b
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcccaatagaagaatctcacatggtcaagaaacgatcagtattcct acaccagggaagtgtaaatcaaaactatatcaagattttatcttacacct gtcagaatattgaagatcaaaaccacaagtgataactcaagttagtgagg atatagagcttcttaaatattcactcattgctggtgggagagttcataac cactatgaaaatcaatatggcagtacttcagaaaattgggattcagtcta cctcaggactcagctataacactcttgggcatatactcaaaagagattcc atcctataacatggaaacttgctcaactatatttattgcagctttgttca taagattaagacaatatatatatatatatatatatatatatatatatata tatatatatatatatatatatgtgtatatatatatatatatatatatata tatatatatatatatatatatatatatatatatatatatatatatatata tatatatatgtgtgtatgtgtgtgtgcgtgtgtgtgtgtgtgcgcgtgtg tgtgtgtgtgtgtgtgtgtgtgtgtatatatatatatatacacatatata tatatatatatatatatatctatctatatatatatatatatatatatata tatatatatatatatatatatgtacacatatgtgtgcgtatacatatata cacatatacatgtatatatatatatatctatatatatatatctacctctc tatgtctatatatatacaactatctgtatgcatgtctacacgatagatga gacatacacgcatgcatatatgtgc
quality values	Open. Hide. 62 41 33 42 62 62 62 39 16 54 59 59 62 62 62 62 62 43 46 62 62 54 39 62 59 62 62 62 62 59 59 59 62 62 62 62 59 62 62 59 59 59 62 62 62 59 62 62 62 62 62 62 59 62 59 59 62 62 54 54 49 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 59 62 62 62 62 62 62 54 49 42 62 62 62 62 62 62 54 42 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 54 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 46 46 46 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 47 47 17 16 15 16 9 9 8 9 9 9 17 20 39 33 52 52 52 52 54 52 52 52 50 46 47 34 37 29 25 28 32 27 28 25 23 28 33 33 33 29 30 33 33 33 27 30 27 21 19 13 16 9 13 10 15 13 10 9 10 10 10 9 9 9 9 9 9 10 9 9 9 9 9 9 9 9 9 9 9 11 9 9 12 9 10 9 9 9 10 11 9 9 11 12 13 9 10 9 12 18 13 12 13 13 14 10 10 6 11 9 11 9 16 10 14 13 16 9 12 10 15 12 14 9 11 6 11 11 20 12 13 15 18 13 14 9 13 13 11 8 11 9 9 11 9 9 9 9 11 11 9 9 11 9 9 11 9 10 12 11 11 13 11 17 23 13 9 11 12 9 13 10 10 6 17 13 21 14 18 21 27 19 12 16 21 17 17 19 18 21 14 11 22 15 14 18 15 9 9 13 13 12 9 9 9 9 9 11 11 15 9 11 8 8 9 17 15 15 13 15 13 23 18 14 14 18 28 19 22 19 22 21 19 17 25 21 26 15 19 16 21 13 16 11 13 13 23 19 19 11 15 13 10 18 13 11 11 10 10 9 10 13 10 10 7 11 7 7 6 11 9 9 5 5 8 8 6 14 11 13 7 6 11 6 6 8 7 12 16 16 13 21 7 17 9 21 22 13 11 8 15 22 14 12 7 9 5 14 8 10 14 14 11 13 14 14 13 14 14 13 13 9 10 10 9 11 9 9 6 6 11 10 13 7 7 16 7 15 6 19 5 14 6 17 8 7 10 6 9 6 6 6 12 8 6 10 7 7 7 5 6 7 8 6 5 6 6 7 5 5 8 7 4 4 5 5 6 12 10 5 9 5 6 7 6 6 6 6 6 10 9 6 4 7 6 5 5 6 4 7 5 6 6 8 8 12

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_103443061_103443347
seq2: B6Ng01-260B13.b_556_871 (reverse)

seq1  GCACATATATGCATGC----------------AAATGCACACATGCATAC  34
      ||||||||||||||||                   || | ||||||||||
seq2  GCACATATATGCATGCGTGTATGTCTCATCTATCGTGTAGACATGCATAC  50

seq1  ACA-------CTATACACACACGTACACA-CTACACACACATGCACACAC  76
      | |        |||| | | || || | |  || | | | ||  | | | 
seq2  AGATAGTTGTATATATATAGACATAGAGAGGTAGATATATAT--ATATAG  98

seq1  ACACACACATACATAC-----TACACACACACAGGCACATGCATGCAAAT  121
      | | | | ||| ||||     ||     | | | | | | |||  || ||
seq2  ATATATATATATATACATGTATATGTGTATATATGTATACGCACACATAT  148

seq1  GTACACACACTACACACACATACACACTATACACA-CTACACACACACAT  170
      ||  ||| | || | | | ||| | | |||| | |  || | | | | ||
seq2  GTGTACATA-TATATATATATATATA-TATATATATATATATATATATAT  196

seq1  ACACA-CTACACACACATGCACACACACATCCACA---GTGTACACACAC  216
      | | |  || | | | ||  | | | | ||  | |   || || | | | 
seq2  ATATAGATAGATATATATATATATATATATATATATGTGTATATATATAT  246

seq1  ACATGCACACACACATACATAC-TACACACACAGGCACATACACGCATGC  265
      | || |||||||||| ||| ||  ||||||||| || || |||| ||  |
seq2  ATATACACACACACACACACACACACACACACACGCGCACACACACA--C  294

seq1  AAATGCACACACACATACACAC  287
      | | ||||||||||||||||||
seq2  ACACGCACACACACATACACAC  316

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information