BAC Information

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BAC

Clone NameB6Ng01-262P13
Chromosome5 (Build37)
Map Location 94,129,130 - 94,130,082
singlet/doubletsinglet
Overlap genenone
Upstream geneShroom3, LOC623798, Ankrd56, Sept11, Ccni, LOC100040826, 2010109A12Rik, Ccng2, LOC632115, EG330129, LOC100040885, LOC666064, LOC100040909, C87414, LOC666075
Downstream geneLOC666077, LOC666081, EG665802, LOC100040408, LOC100040981, EG622719, LOC100041003, BC061212, EG622744, LOC100041032, LOC100041042, LOC624421, AA792892, LOC665521, LOC665551, LOC100041102, LOC665560, LOC100041115, LOC624507, LOC621203
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262P13.bB6Ng01-262P13.g
ACCGA067254GA067255
length1,1981,089
definitionB6Ng01-262P13.b B6Ng01-262P13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcctaatttttggctgtgggtatccatctgttgccatcaggtg
ctggatgaagccactcacaagacagttatgcaaggcttctgtccttaagt
ataaccaagtatcattaagactgtcagagtttggctctcttccatggggt
agatctcaagtttggttaatagttggttgtttattccttcaatctctgct
ctatctttatacctgcatatcttgtaggcatggaaatttttggataggaa
ttggtggattggtgtccccatccctccattggaaatcctgcctagctaga
ggagttggcaacttcatctctttatacccatctgctggggtctcagccaa
ggtccttctcatatactcccagcagcctgctccatcccaggtctcttgct
tttccctgaaatgcccccacatggattgcttttctatctcccaaatctct
aaatcccttgacccttcccaccatacttgataccccaaaatgttcctgtc
cctgtaccctctcctatacagttctccctaagaaatcaccactgatatcg
atttttttttcctcttttgagtgagattcaatcaccttaccttgtgccct
attgttacttagcttgtttggggatttggattgtagcatggtcatcttat
actctataagtaataatgcattaacagtgactacataacatgcaattcct
tcttggtctgagttacctcactcagaatgatcttttccaatttcatccat
ctgcctgaaaataacataatattccttatttttaatagatgaccagtatt
ccatggcataaatgtacaaaatattccttatccattctatggtagagtac
aggtgggttgtttacactttctgcctattatgaataaaggtgctatgaat
gtagttgaggaagtatccttgtaatatagggaagcatgttttagtatttg
cccaggagtgatatagctgggtttttgaggtagattattgtgagaattac
caagattgatttacaatgtagtataaagctgaacacactcaccagaattg
aagactgtctcccttactcttacatcctccacagcatgtaactgcctcct
gaagtttagtcttaacatgctgaatgctaaggaatgacctcaagtacttt
ccatctcgcaatgactaggaaggacgaatagtgtgtgtaatagtggct
gaattcagagagcttgaagcagcgggcacagggcatgcacagatatgtac
cacataatagtattgaaagaagctcccattcctaacccagaagctgtctc
caatctataaagtcttgcaaatgaaacactaaacttgttaaatcaaaatc
tctctcttttttttttttttttggttttttttgagtcagggtttttctgt
ataggccaggctgtcctggaattcactttgtagaccaggctggccttgaa
ctcagaaatctgcctgcctctgcctcccaaatgctggtattaaagatgtg
caccaccactgcctggagttaaatggaaattttctgttggatgcaaatcc
tactcttaaaagaagactaattaaccagttgtaggagggaaacaaaacaa
actcaaagacaatttagcagatctgagtgttagaaagttgtgttatgcac
ttttgtttatttatattgttctgcttttagattataaattctttgattgt
ctattacagctaccatctttctgtttttctgggatttctgtgtctttgaa
tgtattctgtatttctttgggatttgtttttgctgttgttgttgatgatt
ctacttttttttttttgatggggtgggattggctctctttttctgttggt
ttatttattttgtcctgttccaagttgtgtgttcttcttttcttttgatt
ttctgttgctctttttgtttatttgtccatttctctgtttgtttttcaag
cagggtctcattgtatattaaactgttctgtaactcacttgctaggccag
gctggaggtggccctgcctcttcctcccctgtcctggcagtacacttgtg
ttctgccacacatgtttctggattctttagtgcctgtttcttttctcaga
gaagatacaaaggtgtgggattgagatggaaaataatggtggaaaatgac
ctcagaggactgtggggagttgagccataacacacacattggtatgaaat
atattttcagttagggaagcaagaaaacggagggagatatgactgatagt
tagagcactgggcttctctcttaccgatacctcagttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_94129130_94130082
seq2: B6Ng01-262P13.g_187_1157

seq1  AAATGAAACACTAAACTTGTTAAATCAAAATCTCTTTTTTTTTTGTTTTT  50
      ||||||||||||||||||||||||||||||||||| | |||||| |||||
seq2  AAATGAAACACTAAACTTGTTAAATCAAAATCTCTCTCTTTTTTTTTTTT  50

seq1  TTTT--TTTTTTTTGAGTCAGGGTTTTTCTGTGTAGGCCAGGCTGTCCTG  98
      ||||  |||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTTGGTTTTTTTTGAGTCAGGGTTTTTCTGTATAGGCCAGGCTGTCCTG  100

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCGCCTGCC  148
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCC  150

seq1  TCTGCCTCCCAAATGCTGGTATTAAAGATGTGCACCACCACTGCCTGGAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCAAATGCTGGTATTAAAGATGTGCACCACCACTGCCTGGAG  200

seq1  TTAAATGGAAATTTTCTGTTGGATGCAAATCCTACTCTTAAAAGAAGACT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGGAAATTTTCTGTTGGATGCAAATCCTACTCTTAAAAGAAGACT  250

seq1  AATTAACCAGTTGTAGGAGGGAAACAAAACAAACTCAAAGACAATTTAGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAACCAGTTGTAGGAGGGAAACAAAACAAACTCAAAGACAATTTAGC  300

seq1  AGATCTGAGTGTTAGAAAGTTGTGTTATGCACTTTTGTTTATTTATATTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGAGTGTTAGAAAGTTGTGTTATGCACTTTTGTTTATTTATATTG  350

seq1  TTCTGCTTTTAGATTATAAATTCTTTGATTGTCTATTACAGCTACCATCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTTTAGATTATAAATTCTTTGATTGTCTATTACAGCTACCATCT  400

seq1  TTCTGTTTTTCTGGGATTTCTGTGTCTTTGAATGTATTCTGTATTTCTTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTTTCTGGGATTTCTGTGTCTTTGAATGTATTCTGTATTTCTTT  450

seq1  GGGATTTGTTTTTGCTGTTG----------------------TTTTTTGA  476
      ||||||||||||||||||||                      ||||||||
seq2  GGGATTTGTTTTTGCTGTTGTTGTTGATGATTCTACTTTTTTTTTTTTGA  500

seq1  TGGGGTGGGATTGGCTCTCTTTTTCTGTTGGTATATTTATATTGTCCTGT  526
      |||||||||||||||||||||||||||||||| ||||||| |||||||||
seq2  TGGGGTGGGATTGGCTCTCTTTTTCTGTTGGTTTATTTATTTTGTCCTGT  550

seq1  TCCAAGTTGTGTGTTTTTCTTTTCTTTTGATTTTCTGTTGCTCTTTTTGT  576
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCCAAGTTGTGTGTTCTTCTTTTCTTTTGATTTTCTGTTGCTCTTTTTGT  600

seq1  TTATTTGTTCATTTCTCTGTTTGTTTTTCAAGCAGGGTCTCATTGTATGT  626
      |||||||| ||||||||||||||||||||||||||||||||||||||| |
seq2  TTATTTGTCCATTTCTCTGTTTGTTTTTCAAGCAGGGTCTCATTGTATAT  650

seq1  TAAACTGTTCTGTAACTCACTTGCTAGGCCAGGCTGGAGGTGGCCCTGCC  676
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGTTCTGTAACTCACTTGCTAGGCCAGGCTGGAGGTGGCCCTGCC  700

seq1  TCTTCCTCCCCTGTCCTGGCAGTACACTTGTGTTCTGCCACACATGTTTC  726
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCCCCTGTCCTGGCAGTACACTTGTGTTCTGCCACACATGTTTC  750

seq1  TGGATTCTTTAAGTGCCTGTTTCTTTTCTCAGGAGAGATACAAAGGGTGT  776
      |||||||||| |||||||||||||||||||||   ||||||||| |||||
seq2  TGGATTCTTT-AGTGCCTGTTTCTTTTCTCAGAGAAGATACAAA-GGTGT  798

seq1  -GGATTGAGATGGAAAATAATGTGGG--AATGACCTCAGAGGACTTGGGG  823
       |||||||||||||||||||||  ||  |||||||||||||||||  |||
seq2  GGGATTGAGATGGAAAATAATGGTGGAAAATGACCTCAGAGGACTGTGGG  848

seq1  GAGTTGAAGCCATAACCACAACACAGT-GTATGAAAAAAATATTTTCAGT  872
      |||||| |||||||| ||| ||||| | |||||  ||| |||||||||||
seq2  GAGTTG-AGCCATAA-CAC-ACACATTGGTATG--AAATATATTTTCAGT  893

seq1  AAGGGAGAAGCAAAGAAAAGGGGAGGGAGATATGACTGAATAGTTAGAGC  922
       |||  ||||| |||||||  ||||||||||||||||| |||||||||||
seq2  TAGG--GAAGC-AAGAAAA-CGGAGGGAGATATGACTG-ATAGTTAGAGC  938

seq1  ACT-GGCT--TCTCTAACAGATACCTCAGGTTCA  953
      ||| ||||  ||||| || ||||||||| |||||
seq2  ACTGGGCTTCTCTCTTACCGATACCTCA-GTTCA  971