MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-263D23
Chromosome	5 (Build37)
Map Location	85,534,506 - 85,535,584
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Epha5, LOC100039489
Downstream gene	Cenpc1, LOC100039521, AI586015
Link	Open Mouse BAC browser

Click to get alignment info.

name	Epha5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13839 MGI:99654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039489 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039489
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 795 ESTs, 11 Proteins

name	Cenpc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12617 MGI:99700
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039521 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039521
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs pseudo : _no_value

name	AI586015 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56792 MGI:1926193
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Epha5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111154064 GeneID:13839 MGI:99654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Eph receptor A5 transcript_id : NM_007937.2

name	LOC100039489 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253984 GeneID:100039489
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 795 ESTs, 11 Proteins product : similar to Hmgn2 protein transcript_id : XM_001473104.1

name	Cenpc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802028 GeneID:12617 MGI:99700
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centromere protein C1 transcript_id : NM_007683.2

name	AI586015 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385057 GeneID:56792 MGI:1926193
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI586015 transcript_id : NM_019992.3

name	Epha5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111154065 CCDS:CCDS19376.1 GeneID:13839 MGI:99654
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005003 - ephrin receptor activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 note : eck-like sequence 1 product : Eph receptor A5 protein_id : NP_031963.2

name	LOC100039489 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253985 GeneID:100039489
definition	codon_start : 1 product : similar to Hmgn2 protein protein_id : XP_001473154.1

name	Cenpc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671740 GeneID:12617 MGI:99700
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000775 - chromosome, pericentric region [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] codon_start : 1 exception : mismatches in translation function : centromeric protein product : centromere autoantigen C1 protein_id : NP_031709.1

name	AI586015 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910568 CCDS:CCDS19377.1 GeneID:56792 MGI:1926193
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005070 - SH3/SH2 adaptor activity [Evidence IDA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0030099 - myeloid cell differentiation [Evidence TAS]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IDA] codon_start : 1 note : stem cell adaptor protein STAP-1 product : BCR downstream signaling 1 protein_id : NP_064376.1

name	LOC100039521 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253987 GeneID:100039521
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to RNA polymerase I associated factor (Paf53) pseudo : _no_value transcript_id : XR_031063.1

clone name	MSMg01-415L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484O04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-189M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386J07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-330N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473J11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-304D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068N18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-454J02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-068E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186D02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-411B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092C12
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-152C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239E10
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-263D23.b	B6Ng01-263D23.g
ACC	GA067464	GA067465
length	1,196	1,062
definition	B6Ng01-263D23.b	B6Ng01-263D23.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaaggcccatacctaaccatgataaaagcaatctacagcaaacca gtagccatcatcaaagtaaatggtaagaagctggaagcaatcccactaaa atcagggactagacagggctgcccactttctccctacctattcaacatag tacttgaagtcctagcatgagcaatttgataacaaaaggagataaagggg ataaaattggaaaagataaagttaaaatatcactttttgcagatgatatg atagtatatataagtgaccctaaaaatttcaccagagaactcctaaacct gataaatagctttggtgaaatagctggataaaaaattaactcaaacaagt caatggcctttctctaaacaaagaataaacaggctgagaaagaaattagg gaaacaacacccttctcaatagtcacaaataatataaaatatcctggcgt gactctgagtaagtgaaagatctgtatgataagaacttcaagtctctgaa gaaagaaattaaagaagatcccagaagatggtaagatctcccatgctcat ggattggcaggatcaacattgtaaaaacgtctatcttgccaaaagcaatc tacagattcaatgcaatccccatctaagttccaactcaattcttcaaaga attaaaaagagaaatctgcaaattcatctggaataacaaaaacctaggat agtaaaaactcttctcaaggataaaagaacctctggtggaatcaccatgc ctgacctaaagctttactaaagagcaattgtgattaaaaactgcatggta ctggtataatgacagacaagtagaccaatggaatagaattgaaaacccag aaatgaacccacacacctatggtcacttgatctttgacaagggagctaaa gccacccagtggaagaaagacagcattttcaacaaatggtgctagcacaa ctggtggttatcatgtagaagaatgcaaattgatccattcctactcttgt actaagtcaaatctaagtgatcagactccacaataaaaccagagacactg aaactatagagagaaagtggggaaaagcctcgagatttggaccagggcaa aatcctgaatagaacagcattgccttggtgctgtaagatcagattgacca tgggaagctcatgaactgccaagcacctgcagcctaagaaacatcc	gaattcaatgaattttcatgacatatttttttctctttaaagtagagacg tacaccacaaactataataaatgtaacctttattaaactcaggaaatgta gaattatttaggacttgatgggaaatagcaatatttagaaaatattgctt acattatgataagaactttattttaaatattaaagcaaaagctatgaaat gcaattcagtgaacagttagataacttaaaacttctgagtctaatgttaa tcatgttattagaagttttggtttatgtttttttttttttaacctcatct ttctccttcctgccatggctatacgggcacaggtatagcagatcagaata ataaactgaccattcactcagtgatgtgtcacagtccccaaggctgtcac ttttcactgcaggctataaagcaagactgtcttactcagctatgtcatga gtttgaagtgtccttcaggggagcatgtttcgaatgctagctatacagat catgacacaattccgaaggctgaggcatggataacatgtaaggtctgggt ggcaggaatacgtttctgggagtttaggttattattgtgttaccattttc ctaaggtaggaaatttagtccaaagtctaccccccccccttagaatcttg aagaaagttgctaggagttaaaaagagttattctccttatctgtggcaaa tgaaatatgtatctcccccattaatatttgactttggtgcttattagcat gtcaagacctttgtttagacctctaggctcccttagtctctgctcacaga ccccaccatgctcactcacagactgccttctttccaagtacccacttcaa tatgaaccaggaagactcacacgcagcacctttttgtctgctctcctggg agacagccttgggagttgagaataaactttgccctttagccacagagcag ctattttgtctttgctgagtcatgtattttttatagctatgtatgccctg tactgtctcatgaaactgggtcatgctcactgagtactgtttctcctctc agcaattttcac
quality values	Open. Hide. 62 41 35 42 62 37 22 47 62 62 62 62 47 29 62 62 62 62 62 62 62 62 59 36 62 62 59 62 62 62 62 62 59 62 49 56 54 54 54 59 62 59 62 59 62 62 62 62 59 59 62 59 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 59 59 59 59 59 62 59 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 51 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 58 58 58 58 58 54 54 58 58 54 54 41 58 58 58 58 58 58 58 58 58 58 58 58 58 47 58 58 58 58 58 54 58 58 58 45 41 58 58 58 58 58 54 58 45 49 58 54 58 58 58 58 58 58 58 52 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 49 45 37 58 58 58 54 58 52 58 58 58 54 51 58 50 58 58 42 43 47 50 58 58 58 54 52 58 58 58 58 58 44 50 58 53 46 51 58 50 58 49 48 37 31 58 51 58 49 50 39 51 58 54 51 58 50 41 38 58 52 58 43 31 50 40 58 58 58 58 52 58 50 58 58 40 49 53 58 58 50 40 58 41 42 54 50 50 54 53 58 54 54 54 52 52 49 40 50 35 42 44 51 41 34 33 44 51 25 51 38 30 53 53 40 51 54 54 38 54 44 54 53 54 54 53 53 40 42 35 38 54 33 30 39 54 54 51 34 54 29 23 44 51 53 40 52 54 28 42 44 49 40 38 37 37 42 40 33 45 42 49 44 41 52 31 11 40 25 24 52 53 34 34 53 53 42 35 34 27 15 49 53 45 53 25 52 31 32 42 45 52 32 37 33 25 38 28 51 47 47 42 30 31 45 31 31 39 43 48 34 38 31 28 41 46 30 31 43 33 33 31 45 36 39 25 31 42 31 36 42 27 34 27 28 31 13 29 32 31 30 33 43 38 31 28 25 28 42 31 31 38 30 31 47 46 31 32 41 25 25 28 46 47 21 31 43 38 37 27 41 23 15 41 28 31 32 38 30 31 27 30 26 39 28 32 35 28 37 31 29 19 27 32 41 48 31 31 31 19 18 15 25 47 18 17 13 31 31 32 36 25 29 28 31 17 28 28 28 24 21 31 22 25 17 18 13 26 48 31 18 19 16 20 30 31 31 38 48 44 31 32 19 17 31 25 39 22 18 17 26 10 29 26 32 24 32 34 31 24 14 22 29 25 20 31 19 22 26 15 6 15 31 24 23 22 32 17 17 22 33 33 13 30 28 32 34 17 8 29 14 11 18 22 14 28 16 26 20 28 27 19 21 20 11 14 7 5 3 5 22 11 24 28 28 11 7 3 4 21 19 34 13 11 19 28 20 21 19 19 16 3 7 7 3 6 3 4 6 6 27 10 6 5 9 21 19 38 27 19 6 11 13 8 11 4 6 9 7 23 21 11 13 28 7 8 16 6 13 6 7 15 19 4 5 18 28 21 16 11 12 30 28 7 4 13 26 14 9 19 8 19 12 4 3 4 6 8 5 12 7 3 3 3 8 4 13 29 3 1 3 28 28 15 8 3 12 10 8 16 16 13 10 9 20 25 5 6 12 16 21 5 7 14 4 4 14 8 10 15 6 7 23 8 16 8 5 14 7 22 6 5 3 3 3 2 2 4 2 1 1 5 1 3 26 6 7 11 6 13 10 7 16 10 6 14 16 9 6 6 4 4 7 5 4 4 2 2 5 12 6 7 3 3 2 2 3 4 4 6 10 23 9 4 2 2 8 1	Open. Hide. 49 35 62 59 62 49 59 62 62 62 49 51 33 43 43 56 23 27 48 43 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 59 59 62 59 54 49 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 54 62 62 59 59 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 62 62 54 54 62 62 62 54 54 62 62 59 62 62 59 62 62 62 54 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 54 48 46 59 50 48 54 54 56 56 59 43 54 62 62 54 49 62 62 62 59 62 62 54 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 45 62 59 56 56 45 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 56 59 62 59 59 62 59 62 59 62 62 62 62 62 62 62 49 62 62 62 62 59 62 56 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 52 58 58 41 58 52 52 54 58 45 54 54 54 58 58 58 41 50 58 58 52 58 58 58 58 58 58 58 58 52 58 58 58 58 58 52 58 49 42 54 49 58 58 46 42 54 41 47 58 58 58 52 54 58 58 58 54 47 58 58 54 54 42 45 43 43 48 31 38 51 49 58 58 50 58 48 38 50 46 51 41 58 58 58 41 51 58 48 50 49 37 49 42 49 43 58 58 58 47 39 58 47 51 51 50 48 48 32 46 58 50 39 52 52 50 48 58 58 58 58 58 48 41 38 46 51 37 50 32 49 44 46 50 48 50 52 49 54 29 58 58 43 37 41 51 47 39 41 50 50 50 35 25 49 31 35 58 58 58 44 31 53 25 43 50 34 41 53 45 39 40 40 40 47 42 42 37 45 51 32 49 38 19 40 54 42 32 49 37 54 51 34 42 39 54 32 53 42 52 37 40 54 54 54 42 32 53 31 31 53 28 45 37 54 46 40 47 19 32 49 37 38 54 24 52 29 32 32 45 29 42 52 32 32 32 30 51 31 39 34 36 32 34 17 17 24 49 32 32 32 53 26 29 28 39 26 38 27 25 30 31 31 51 31 37 30 46 31 31 31 38 24 31 31 43 36 29 45 33 31 32 34 28 33 24 25 13 33 33 29 28 31 22 28 32 42 43 42 24 31 34 42 29 31 28 31 32 42 24 31 42 26 32 28 33 25 22 47 43 21 31 22 22 28 28 27 23 41 19 24 32 39 31 27 29 25 32 34 34 25 20 25 13 27 31 28 37 25 30 13 31 11 31 22 18 28 24 33 26 31 32 31 32 19 13 19 32 48 47 47 33 28 33 31 32 31 18 34 31 26 17 18 30 31 44 24 20 7 26 10 23 21 22 14 13 20 32 48 23 20 18 26 22 23 30 19 27 32 20 17 48 22 27 28 40 21 17 14 16 8 17 47 31 21 15 30 8 12 16 15 16 28 13 28 28 12 27 27 25 28 34 31 13 13 17 5 3 40 23 28 22 25 11 32 10 17 18 11 6 5 4 4 3 4 3 3 5 6 5 5 3 10 27 28 18 24 16 19 9 6 18 9 26 10 8 7 3 10 15 6 11 8 10 15 16 25 6 11 9 28 13 18 11 18 28 21 13 16 21 9 11 22 8 10 10 11 16 16 9 4 4 16 16 10 11 5 27 8 8 4 10 4 4 7 15 10 20 9 10 9 5 22 25 23 10 2 2 1

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_85534506_85535584
seq2: B6Ng01-263D23.g_67_1128 (reverse)

seq1  GTGAAAAATGCTGAGAGGAGAAACAGTACTCAGTGAGGCATGACCCAGGT  50
      ||||||| |||||||||||||||||||||||||||| |||||||||| ||
seq2  GTGAAAATTGCTGAGAGGAGAAACAGTACTCAGTGA-GCATGACCCA-GT  48

seq1  TTCATTGAGACAGTACCAGGGCATACATAGCTAAATAAAAAAAAAAAAAA  100
      |||| |||||||||| ||||||||||||||||        | |||||| |
seq2  TTCA-TGAGACAGTA-CAGGGCATACATAGCT--------ATAAAAAATA  88

seq1  AATGACTTCAGCAAAGGAACAAAAATAGCTGCTCTGTGGCTAAAAGGGCA  150
       ||||| |||||||||  || |||||||||||||||||||| ||||||||
seq2  CATGAC-TCAGCAAAG--AC-AAAATAGCTGCTCTGTGGCT-AAAGGGCA  133

seq1  AAGTTTATTCTCAACTCCCAAGGCTGTCTCCCAGGAGAGCAGACAAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTATTCTCAACTCCCAAGGCTGTCTCCCAGGAGAGCAGACAAAAAG  183

seq1  GTGCTGCGTGTGAGTCTTCCTGGTTCATATTGAAGTGGGTACTTGGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGCGTGTGAGTCTTCCTGGTTCATATTGAAGTGGGTACTTGGAAAG  233

seq1  AAGGCAGTCTGTGAGTGAGCATGGTGGGGTCTGTGAGCAGAGACTAAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGTCTGTGAGTGAGCATGGTGGGGTCTGTGAGCAGAGACTAAGGG  283

seq1  AGCCTAGAGGTCTAAACAAAGGTCTTGACATGCTAATAAGCACCAAAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGAGGTCTAAACAAAGGTCTTGACATGCTAATAAGCACCAAAGTC  333

seq1  AAATATTAATGGGGGAGATACATATTTCATTTGCCACAGATAAGGAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTAATGGGGGAGATACATATTTCATTTGCCACAGATAAGGAGAAT  383

seq1  AACTCTTTTTAACTCCTAGCAACTTTCTTCAAGATTCTAAGGGGGGGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTTTTAACTCCTAGCAACTTTCTTCAAGATTCTAAGGGGGGGGGG  433

seq1  TAGACTTTGGACTAAATTTCCTACCTTAGGAAAATGGTAACACAATAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTTTGGACTAAATTTCCTACCTTAGGAAAATGGTAACACAATAATA  483

seq1  ACCTAAACTCCCAGAAACGTATTCCTGCCACCCAGACCTTACATGTTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAACTCCCAGAAACGTATTCCTGCCACCCAGACCTTACATGTTATC  533

seq1  CATGCCTCAGCCTTCGGAATTGTGTCATGATCTGTATAGCTAGCATTCGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTCAGCCTTCGGAATTGTGTCATGATCTGTATAGCTAGCATTCGA  583

seq1  AACATGCTCCCCTGAAGGACACTTCAAACTCATGACATAGCTGAGTAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGCTCCCCTGAAGGACACTTCAAACTCATGACATAGCTGAGTAAGA  633

seq1  CAGTCTTGCTTTATAGCCTGCAGTGAAAAGTGACAGCCTTGGGGACTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTGCTTTATAGCCTGCAGTGAAAAGTGACAGCCTTGGGGACTGTG  683

seq1  ACACATCACTGAGTGAATGGTCAGTTTATTATTCTGATCTGCTATACCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCACTGAGTGAATGGTCAGTTTATTATTCTGATCTGCTATACCTG  733

seq1  TGCCCGTATAGCCATGGCAGGAAGGAGAAAGATGAGGTTAAAAAAAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCGTATAGCCATGGCAGGAAGGAGAAAGATGAGGTTAAAAAAAAAAA  783

seq1  AACATAAACCAAAACTTCTAATAACATGATTAACATTAGACTCAGAAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAACCAAAACTTCTAATAACATGATTAACATTAGACTCAGAAGTT  833

seq1  TTAAGTTATCTAACTGTTCACTGAATTGCATTTCATAGCTTTTGCTTTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTATCTAACTGTTCACTGAATTGCATTTCATAGCTTTTGCTTTAA  883

seq1  TATTTAAAATAAAGTTCTTATCATAATGTAAGCAATATTTTCTAAATATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAAATAAAGTTCTTATCATAATGTAAGCAATATTTTCTAAATATT  933

seq1  GCTATTTCCCATCAAGTCCTAAATAATTCTACATTTCCTGAGTTTAATAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTCCCATCAAGTCCTAAATAATTCTACATTTCCTGAGTTTAATAA  983

seq1  AGGTTACATTTATTATAGTTTGTGGTGTACGTCTCTACTTTAAAGAGAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTACATTTATTATAGTTTGTGGTGTACGTCTCTACTTTAAAGAGAAA  1033

seq1  AAAATATGTCATGAAAATTCATTGAATTC  1079
      |||||||||||||||||||||||||||||
seq2  AAAATATGTCATGAAAATTCATTGAATTC  1062

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information