BAC Information

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BAC

Clone NameB6Ng01-263L08
Chromosome5 (Build37)
Map Location 74,922,700 - 74,923,887
singlet/doubletsinglet
Overlap geneScfd2
Upstream geneDcun1d4, BC031901, Sgcb, Spata18, Usp46, 2700023E23Rik, Rasl11b
Downstream geneFip1l1, Lnx1, EG619945, Chic2, Gsh2, LOC100039083, Olfr1401-ps1, Pdgfra, LOC100039125, LOC100039143, LOC100039158, LOC100039169
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263L08.bB6Ng01-263L08.g
ACCGA067806GA067807
length1,180580
definitionB6Ng01-263L08.b B6Ng01-263L08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaaaaaaaaaaagaaaacgtgttaaacttggtgactgtctagt
tcccagtaaacattaatctactgacctacccagtcattaacaaatgctta
tttccaggctagtggcacaatgcctgaaatcccaggactcaagaagcaaa
ggtaacaaattcacaagaagccttgcccacatagtaagttcaaagccagt
gggagctacttagtgagatcctgtttcaaaacaccaaggccttgggatgc
aactcaatggtagagcatttgcctagcatgcaaagggccctgagttcaat
acccagcaatacatttcatcaatcagcagatacataaataaatattgact
acatatggttttcaagtaactgttccaactgctagtaaatacacagtaac
gaaagaacgaacacacacacacatatatacaagcttccattccattctca
tgaaaggaggacaagaagcaaccaattattggttctgggtagtggccaac
gtggagtgtttgaggtactgtgtgagaggagataagccacgtgtaactat
gaatactgctggttactctttgtcacatcgttatgtgaaaagaggaaacc
tcaattaagtaatagcctccattggattgtcttataacattctttttttc
cccagagggcaggaccttaaacagctggcagtgtgcttttgacttctatc
tggacatccttcccattaaccctttcacctttagggagatggatatggct
atctcagaagcgtagctgggctcttagtatggagacgatcactagcagcc
atctgacctctgtaggcttgaatactgagccacacaagcccctgagttct
ttctatctttccgagggagcctgattactggtcttatggcattcttatgg
ggcattttcttgattaatgattggtaaggaggacctagcccattgtaggc
agttccacccctgggcatgttgtcctgggttgtacaagaaagcaagtcca
tcaagaagtatcacccccacgagctctgttcaggctcctgcttggagttc
tgcactgacttcactcagtgatggactataacccagagtgaaactaaata
aagcttctccaacagtggctttgctcaggatgtttagtatagcaactaaa
gcaactagacacatgaataccatgatagga
gaattcctgcacgcaaagcttgaggatcattgagggaaagagaggggcag
aaagagccagagaacaggaagtttgtagtgaaactatgtctcctagaaat
gccaggcttatcgacgtggctgcccaaacaagacttaaccaatgaccatc
ccaatggccatgtcaacacagaagggaagaagctcaaggagcttcaaccc
tcagcctaagaattatgggcaactgggaaatgctgagtgggagaaatggt
ctttccaaagagccccataactagttatccattaccaaataataataaag
aagagccccataactagttatccattgccaaataatcagctctgaggcca
tatgcacactagtaatacacacagagtggattatatttaggaacgtgtgt
gtgtgtgtgttgtgcataaaacaaaactttttaaaaaagaggccatgtat
ttgagaataaggattgtgggaggggttagaggaaagagtggaaaggggga
attaattaattataagtcaagatattaaaaattatcattaaataaatttt
taataaaataaagctaagtattttactaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_74922700_74923887
seq2: B6Ng01-263L08.b_41_1220

seq1  GAATTCAAAAAAAAAAAAAGAAAACGTGTTAAACTTGGTGACTGTCTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAAAAAAAAAAGAAAACGTGTTAAACTTGGTGACTGTCTAGT  50

seq1  TCCCAGTAAACATTAATCTACTGACCTACCCAGTCATTAACAAATGCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTAAACATTAATCTACTGACCTACCCAGTCATTAACAAATGCTTA  100

seq1  TTTCCAGGCTAGTGGCACAATGCCTGAAATCCCAGGACTCAAGAAGCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGGCTAGTGGCACAATGCCTGAAATCCCAGGACTCAAGAAGCAAA  150

seq1  GGTAACAAATTCACAAGAAGCCTTGCCCACATAGTAAGTTCAAAGCCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACAAATTCACAAGAAGCCTTGCCCACATAGTAAGTTCAAAGCCAGT  200

seq1  GGGAGCTACTTAGTGAGATCCTGTTTCAAAACACCAAGGCCTTGGGATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCTACTTAGTGAGATCCTGTTTCAAAACACCAAGGCCTTGGGATGC  250

seq1  AACTCAATGGTAGAGCATTTGCCTAGCATGCAAAGGGCCCTGAGTTCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAATGGTAGAGCATTTGCCTAGCATGCAAAGGGCCCTGAGTTCAAT  300

seq1  ACCCAGCAATACATTTCATCAATCAGCAGATACATAAATAAATATTGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGCAATACATTTCATCAATCAGCAGATACATAAATAAATATTGACT  350

seq1  ACATATGGTTTTCAAGTAACTGTTCCAACTGCTAGTAAATACACAGTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGGTTTTCAAGTAACTGTTCCAACTGCTAGTAAATACACAGTAAC  400

seq1  GAAAGAACGAACACACACACACATATATACAAGCTTCCATTCCATTCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAACGAACACACACACACATATATACAAGCTTCCATTCCATTCTCA  450

seq1  TGAAAGGAGGACAAGAAGCAACCAATTATTGGTTCTGGGTAGTGGCCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGAGGACAAGAAGCAACCAATTATTGGTTCTGGGTAGTGGCCAAC  500

seq1  GTGGAGTGTTTGAGGTACTGTGTGAGAGGAGATAAGCCACGTGTAACTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTGTTTGAGGTACTGTGTGAGAGGAGATAAGCCACGTGTAACTAT  550

seq1  GAATACTGCTGGTTACTCTTTGTCACATCGTTATGTGAAAAGAGGAAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACTGCTGGTTACTCTTTGTCACATCGTTATGTGAAAAGAGGAAACC  600

seq1  TCAATTAAGTAATAGCCTCCATTGGATTGTCTTATAACATTCTTTTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTAAGTAATAGCCTCCATTGGATTGTCTTATAACATTCTTTTTTTC  650

seq1  CCCAGAGGGCAGGACCTTAAACAGCTGGCAGTGTGCTTTTGACTTCTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGGGCAGGACCTTAAACAGCTGGCAGTGTGCTTTTGACTTCTATC  700

seq1  TGGACATCCTTCCCATTAACCCTTTCACCTTTAGGGAGATGGATATGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATCCTTCCCATTAACCCTTTCACCTTTAGGGAGATGGATATGGCT  750

seq1  ATCTCAGAAGCGTAGCTGGGCTCTTAGTATGGAGACGATCACTAGCAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGAAGCGTAGCTGGGCTCTTAGTATGGAGACGATCACTAGCAGCC  800

seq1  ATCTGACCTCTGTAGGCTTGAATACTGAGCCACACAAGCCCCTGAGTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACCTCTGTAGGCTTGAATACTGAGCCACACAAGCCCCTGAGTTCT  850

seq1  TTCTATCTTTCCGAGGGAGCCTGATTACTGGTCTTATGGCATTCTTATGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCTTTCCGAGGGAGCCTGATTACTGGTCTTATGGCATTCTTATGG  900

seq1  GGCATTTTCTTGATTAATGATTGGTAAGGAGGACCTAGCCCATTGTAGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTTCTTGATTAATGATTGGTAAGGAGGACCTAGCCCATTGTAGGC  950

seq1  AGTTCCACCCCTGGGCATGTTGTCCTGGGTTGTACAAGAAAGCAAGTCCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCACCCCTGGGCATGTTGTCCTGGGTTGTACAAGAAAGCAAGTCCA  1000

seq1  TCAAG-AGTATCA-CCCCACGAGCTCTGTTCCAGGCTCCTGCTT-GAGTT  1047
      ||||| ||||||| |||||||||||||||| ||||||||||||| |||||
seq2  TCAAGAAGTATCACCCCCACGAGCTCTGTT-CAGGCTCCTGCTTGGAGTT  1049

seq1  CCTGCACTGACTTCACTCAGTGATGGACTATTACCCAGAAGTTGAAACCA  1097
       |||||||||||||||||||||||||||||| |||||||   |||||| |
seq2  -CTGCACTGACTTCACTCAGTGATGGACTATAACCCAGA--GTGAAACTA  1096

seq1  AATAAAGCCTTCTCCAACCAAGTTGCCTTTGCTCAGGATGTTTAGTATAG  1147
      ||||||| ||||||||||  || || ||||||||||||||||||||||||
seq2  AATAAAG-CTTCTCCAAC--AG-TGGCTTTGCTCAGGATGTTTAGTATAG  1142

seq1  CAACTAAAAGCAAACTAGAACACATGAATACCATGATAGGA  1188
      ||||| ||||| |||||| ||||||||||||||||||||||
seq2  CAACT-AAAGC-AACTAG-ACACATGAATACCATGATAGGA  1180