BAC Information

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BAC

Clone NameB6Ng01-264P06
Chromosome5 (Build37)
Map Location 50,919,280 - 50,920,460
singlet/doubletsinglet
Overlap genenone
Upstream geneEG433885, LOC666223, Gpr125, EG637307
Downstream geneLOC100041015, LOC242987, EG624734, LOC666265, LOC100041059, Ppargc1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264P06.bB6Ng01-264P06.g
ACCGA068728GA068729
length1,197741
definitionB6Ng01-264P06.b B6Ng01-264P06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttggtgaaaaaatgctgttgcattttactgcccctttaatgatg
aattgtttatattaaggtttgcatttccatgtattttatatgtgcataaa
gtgtatgtgtattcttgatatttgcaaataagcctgtgtacagaaacttt
caaaatgggttgttaatttttcttttaaagggattctccttaatctgatc
atttctgtaaaatcacaatgaaacaaaagttcagggtatatagaggcaat
tatgttaccaagctactcactcaattattgaatcctctttaagatgtcca
tgacaaataaccactcatctgccacctgagtgccttgagtcaaagggaat
ttctggaattgtctatggatgactaatgttgtcactttttgtcatgcatt
acctgaagagagagcaccttggttcttcgttggggaattgctattctcta
ttctctggtgtctgctgttttaatgggcccatccgtcgaggtgttccttc
tctgttagtcaaggagcagccacgtgatcccagctatgacaatccaaatc
tatcatccggggatttaattctcagtgttaggaggtaagagagaaaaaca
gtgggaactgatttattccagtgaatgtgcattgaagatcctagtgtccc
caaatgtttggattcttcaactttaatttcagctctgtgaggccccaata
cattcacaaattcaattttgtctaaaattatgtttaattgcaacaaaaaa
tctacctaatactctgcctggtattgcacttatttaatgggaaataatac
agaaaatatacagaaataatacagaaaatgggaaataatacagaaaaaat
acagaaaaaaaacaccccatctttgatagtatagaccatatatacttgaa
tatttaagcaacattttttttcataaatcaattctttcatttcccttgta
cttatattttaaagaagcccaagttatcttttcataacttccttgtgttg
tgttttctgcctcagcattcatcactttatttggtcccctacagtagaga
ctcctgaggaatatttaaaaatacaataataaatgtctgttcccactttt
catgctagcatattttatatatgcacctttgcacatttacatggaagagg
tcttcaggaataaacctagactaccatatgtgcagccagtcctacat

gaattccaactgtagtttgtggtgatccgatagtatgcatgagattattt
cagtcttctcgtatcagttgaggcatgttttgtgtctgattatatggtca
attttggagaaggtaccatgaggtgctgagaagaaggtatattcttttgt
tttatggtggcatgttctgtagatatctgttaaatccatttgctccataa
cttctgttagtttttctgtgtctctgtttcatttttgtctccatgatctt
tccattggtgagagaggggtgttgaagtctccaactattattgtgtgtgg
atcaatgtatgttttgagttttagtaatgtttctttacaaatgtgggtat
ctttatatttggggcatcaatgttcagaactgagagttcattttggtgaa
tgtttcctttgatatgtatgaagtgaccttctccatatcttttgataact
tttggttgaaagtctattttattggatattagaatggctactccagcttg
tttcttgggatcatttgcttggaatttttttccagccatttagacttagg
tagtgtctatctttgtcactgatgtgtgtttcctgtatgtatgctacaaa
acgttgggcctgtttgcatatccattttgttagcctatgtgtattgggga
atcaagtcccattgatgttgggagatattaaagatcagtgattgttggtt
tctgttatttttagtggatagttgtggtatttatgtttcgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_50919280_50920460
seq2: B6Ng01-264P06.b_47_1243 (reverse)

seq1  ATGTAGGCATGGCTGCACATATGTAGGTCTGTGTTTATTTCTGATGACTT  50
      |||||||  ||||||||||||||   ||||  ||||||| |||| ||| |
seq2  ATGTAGGACTGGCTGCACATATGGTAGTCTAGGTTTATTCCTGAAGACCT  50

seq1  CTTCCATGTAATGTTTGC-AAGGTGC-TATATAAAATATGCTAGCATGAA  98
      |||||||||||  | ||| ||||||| |||||||||||||||||||||||
seq2  CTTCCATGTAA-ATGTGCAAAGGTGCATATATAAAATATGCTAGCATGAA  99

seq1  AAGTGG--ACAGACATTTATTATTGTA-TTTTAAATATTCC-CAGGAGTC  144
      ||||||  ||||||||||||||||||| ||||||||||||| ||||||||
seq2  AAGTGGGAACAGACATTTATTATTGTATTTTTAAATATTCCTCAGGAGTC  149

seq1  TCTAACTGTAGGGGAC--AATAAAGGTGATGAATGCTGAGGCAG-AAACA  191
      ||| ||||||||||||  |||||| ||||||||||||||||||| |||||
seq2  TCT-ACTGTAGGGGACCAAATAAA-GTGATGAATGCTGAGGCAGAAAACA  197

seq1  CAACACAAAGGAGTTATGAAAAGATAACTT-GGCTTCTTTAAAATAT-AG  239
      |||||||| | ||||||||||||||||||| |||||||||||||||| ||
seq2  CAACACAAGGAAGTTATGAAAAGATAACTTGGGCTTCTTTAAAATATAAG  247

seq1  TACAA-GGAAATGAA--GATTGATTTATGAAAAAAAATG-TGC-TAAATA  284
      ||||| |||||||||   ||||||||||||||||||||| ||| ||||||
seq2  TACAAGGGAAATGAAAGAATTGATTTATGAAAAAAAATGTTGCTTAAATA  297

seq1  TTCAAGTATATATGGTCTATACTATCAAAGATGGGGTG-TTTTTTTCTGT  333
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTCAAGTATATATGGTCTATACTATCAAAGATGGGGTGTTTTTTTTCTGT  347

seq1  ATTTTTTCTGTATTATTTCCCATTTTCTGTATTATTTCTGTATATTTTCT  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCTGTATTATTTCCCATTTTCTGTATTATTTCTGTATATTTTCT  397

seq1  GTATTATTTCCCATTAAATAAGTGCAATACCAGGCAGAGTATTAGGTAGA  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTATTTCCCATTAAATAAGTGCAATACCAGGCAGAGTATTAGGTAGA  447

seq1  TTTTTTGTTGCAATT-AACATAATTTTAGACAAAATTGAATTTGTGAATG  482
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTGCAATTAAACATAATTTTAGACAAAATTGAATTTGTGAATG  497

seq1  TATTGGGGCCTCACAGAGCTGAAATTAAAGTTGAAGAATCC-AACATTTG  531
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TATTGGGGCCTCACAGAGCTGAAATTAAAGTTGAAGAATCCAAACATTTG  547

seq1  GGGACACTAGGATCTTCAATGCACATTCACTGGAATAAATCAGTTCCCAC  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACTAGGATCTTCAATGCACATTCACTGGAATAAATCAGTTCCCAC  597

seq1  TGTTTTTCTCTCTTACCTCCTAACACTGAGAATTAAATCCCCGGATGATA  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCTCTCTTACCTCCTAACACTGAGAATTAAATCCCCGGATGATA  647

seq1  GATTTGGATTGTCATAGCTGGGATCACGTGGCTGCTCCTTGACTAACAGA  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGGATTGTCATAGCTGGGATCACGTGGCTGCTCCTTGACTAACAGA  697

seq1  GAAGGAACACCTCGACGGATGGGCCCATTAAAACAGCAGACACCAGAGAA  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAACACCTCGACGGATGGGCCCATTAAAACAGCAGACACCAGAGAA  747

seq1  TAGAGAATAGCAATTCCCCAACGAAGAACCAAGGTGCTCTCTCTTCAGGT  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAATAGCAATTCCCCAACGAAGAACCAAGGTGCTCTCTCTTCAGGT  797

seq1  AATGCATGACAAAAAGTGACAACATTAGTCATCCATAGACAATTCCAGAA  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATGACAAAAAGTGACAACATTAGTCATCCATAGACAATTCCAGAA  847

seq1  ATTCCCTTTGACTCAAGGCACTCAGGTGGCAGATGAGTGGTTATTTGTCA  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTTTGACTCAAGGCACTCAGGTGGCAGATGAGTGGTTATTTGTCA  897

seq1  TGGACATCTTAAAGAGGATTCAATAATTGAGTGAGTAGCTTGGTAACATA  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATCTTAAAGAGGATTCAATAATTGAGTGAGTAGCTTGGTAACATA  947

seq1  ATTGCCTCTATATACCCTGAACTTTTGTTTCATTGTGATTTTACAGAAAT  981
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCTCTATATACCCTGAACTTTTGTTTCATTGTGATTTTACAGAAAT  997

seq1  GATCAGATTAAGGAGAATCCCTTTAAAAGAAAAATTAACAACCCATTTTG  1031
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGATTAAGGAGAATCCCTTTAAAAGAAAAATTAACAACCCATTTTG  1047

seq1  AAAGTTTCTGTACACAGGCTTATTTGCAAATATCAAGAATACACATACAC  1081
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTCTGTACACAGGCTTATTTGCAAATATCAAGAATACACATACAC  1097

seq1  TTTATGCACATATAAAATACATGGAAATGCAAACCTTAATATAAACAATT  1131
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCACATATAAAATACATGGAAATGCAAACCTTAATATAAACAATT  1147

seq1  CATCATTAAAGGGGCAGTAAAATGCAACAGCATTTTTTCACCAAGAATTC  1181
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTAAAGGGGCAGTAAAATGCAACAGCATTTTTTCACCAAGAATTC  1197


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