BAC Information

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BAC

Clone NameB6Ng01-265F24
Chromosome5 (Build37)
Map Location 30,948,138 - 30,948,244
singlet/doubletsinglet
Overlap genenone
Upstream geneUbe3c, LOC100039363, EG332993, Dnajb6, EG433865, LOC100039405, LOC100034662, LOC100039369, Il6, Tyms, EG242914, Gm444, Hadha, Hadhb, Gpr113, EG384325, D5Wsu178e, Gm1060, Otof, 1700001C02Rik, 1700041E20Rik, Kcnk3
Downstream gene4930471M23Rik, Cenpa, Dpysl5, Mapre3, 1110039B18Rik, 9430057O19Rik, 2310016E02Rik, Emilin1, Khk, Cgref1, Abhd1, Preb, Tcf23, Slc5a6, 0610007C21Rik, Cad, Slc30a3, Dnajc5g, Trim54, Ucn, Mpv17, Gtf3c2, Eif2b4, Snx17, Zfp513, Ppm1g, ENSMUSG00000055424, Nrbp1, Krtcap3, Ift172, Fndc4, Gckr, Zfp512, 4930548H24Rik, Xab1, Supt7l, Slc4a1ap, Mrpl33, Rbks, LOC100040000
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265F24.bB6Ng01-265F24.g
ACCGA069044GA069045
length1,194967
definitionB6Ng01-265F24.b B6Ng01-265F24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattatgtagactaggttggcctggaatccagagatatccacttg
cctttacttctttttttcctttctttttaattagatattttctttacatt
tcaaatgttatcccctttactggtttctccctaaaaaccctctatcctgt
ccccctccccctgcttctatgagagtgtttccctacctacccgctcctag
ttccctgtcctggcactcccctacactggggtatccagccttcacaggac
caagggcctgtcctcctattgatatccgacaatacaatcctctgctacac
atgcaacttaagccatgggtccctccatgtgtactctttggttggtggtt
tagtccatgggagctctggggtgtctgattggttgatattgttgttcttc
ctatggggctacaaaccccttcagctccttccatcttttctcgaactact
ctattggggactaatggttggctgtgacatccacctctgtatttgtcagg
ctctgacagagcctctcaggagacagctgtatcagtatcctgtcagcaaa
cacttcttggcattcacaatagtgtctgggtttggtaaatgtatatggga
tggatcctcaaggtggggcagtctctgaatgacctttccttcagtctctg
tgtcacactttgtatcttctcccttgggtatttgattctccctgctaaaa
aggaccaacacacccacattttggtcttccttcttgagcttcatgtgctc
tgagaattgggtcttgggtattccaagcttgtgggctaatatacactcat
cagtgagtgtgtgccatgtgtgttcttttgtgactgggttacatcactca
ggatgatattttttctagttccatccatttacctaggaattttatgaact
cattgtttttaatagctgagtagtactccattgtgtaactgtaacacatc
aaggatatctggctattataaataaggttgttatgaacatagtggatcat
gtgtcctgttatatgtgggaacatcttttggtatatatgctcaggagtag
ttatatcctgggtcctcaggcaataactatgtttggaattttctggaagg
aatcacaccgaactgatttcccagaagtgtttgtcaattccaccgacatt
agaggaaggttccccctcttttcacatcatcctctacacagcat
gaattctcacctgaggaataccgaatgacagagaatcacctgaaaaaatg
ttcaacattcttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaatttaggtgacagc
agatgctggcgtggatgtggagaaagagaaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggattcagcaatacctctcctgggc
atatatccagaagatgccacaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcacacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggccctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcataggctccca
atggagagctagagaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_30948138_30948244
seq2: B6Ng01-265F24.g_924_1029 (reverse)

seq1  CTTCTCTAGCTTCTCCATTGGGGGACCTGTGTTCCATCTTATAGATGACT  50
      |||||||||| ||||||||||| | ||| || ||||||   ||| |||||
seq2  CTTCTCTAGC-TCTCCATTGGGAG-CCTATGATCCATCCATTAGCTGACT  48

seq1  GTGAGCATCCACTTCTGTATTTGC-CCGGCTCTGGCATAGCCTCATACGA  99
      |||||||||||||||||| |||||   ||| | ||||||| |||| | ||
seq2  GTGAGCATCCACTTCTGTGTTTGCTAGGGCCCCGGCATAGTCTCACAAGA  98

seq1  GACAGCTA  107
      ||||||||
seq2  GACAGCTA  106