BAC Information

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BAC

Clone NameB6Ng01-265P08
Chromosome5 (Build37)
Map Location 99,160,859 - 99,292,790
singlet/doubletdoublet
Overlap gene1700007G11Rik, Bmp3
Upstream geneAntxr2, EG435856, LOC666315, LOC666320, LOC666326, Prdm8, Fgf5
Downstream genePrkg2, LOC100041680, Rasgef1b, A930011G23Rik, LOC100040738, LOC666364
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265P08.bB6Ng01-265P08.g
ACCGA069473GA069474
length1,1171,197
definitionB6Ng01-265P08.b B6Ng01-265P08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,291,674 - 99,292,790)(99,160,859 - 99,162,038)
sequence
gaattcattaagtgctttttattctgctgtgtaaaaggaatatagaggtt
ttatcaactgttggaaaggggagctggggttgcctgttccatgcagtgat
ctttcttttttattgaggggggcggttcgagacagggtttctctgtgttc
ccctggctgtcctggaactcactttgtagaccaggctggtctcaaactca
gaaattacctgcctctgtctcctgagtgctgggattaaaggtgtgagcca
ccatgcccagcttgcagtgatctttctaaggggtctgatcattaaataaa
gatggaagatgcctttctgtctctatctgaaaagcaaaaccaaaattgaa
cttagggagtggactctaattcgagggagcttgtaattaggctccaattt
agggggtctcaggaccattttgccccccccttttgttcagtcaccctctg
ggagtagctgagacagtatctcaggagttaggtaaaggaagttcctgatc
ctactgaccgacatagaacggcttcaaagggaatgagcagatacaatgga
aagctttctgtgcaaagtctaattttaaagcaaataggctaaatgaaagc
ttgatgactagctaaatccccaggaaggagggaaaaagcctttcagtcat
actgaaaatatgtaaccaagcacaggtctccacacccactctctgtttct
ttctccaagggacgttgagttgctggaaaggtccaatgcctggggtgggg
gtgcaggtagggacagtgcacagaagtcactggctgactgtcctctgctg
ttaacttaggcctcacttctccaggctgccttcctcttcctgacaggggc
tctgaatcgaacatgaagcatgacattctatgttgttttgaagactcagt
caaatgcttaagttttgtggcatccccaaacagccatgcttctgtgtcca
gagaatcaaaacatcaaccaaggatgagataatgccatgtgttctagaat
ggaaactgttcactataatttatggtgcaggagccttcacccaagggcat
tcccagactggtggaactcccagggaggggagcaggacggtcctgcactc
ctggaacacgcattgct

gaattccaggacagccagggctatacagagaaaccctgtctcgaaaaaca
aacaaacaaacaaaaagtaagtctcaatttatatataacttcgaacatct
cattcttttctctctaacacttggaatctatataaacaaaacctgcatgt
gttcttgaatgttattttcattcattcaatcctccagaccattttgaact
ctaatgaagaggacaagtgatcttaaattattcctttcttcacaggcact
gcaaaagacctgagcgtaaggacttactccaaccattttgaatgtagaca
tagcttagaaaccagaaggaaagctaacatcagcaatttcccttagaaag
caagtcttcaatcaccacaaatgaacaagtgaactatacgtgacactctg
agagaagcacactcgtaaaatggccatgatgctgcagcctctcccctttg
cactgctcaacagcattcccgccaagagaggatgaggtcaccctcccagg
ctctgcaatcagagcagactgagagtcactttggccaactggatggtcct
tctgaggctgtttgcaagagggaagacaaagagctatttctaacagcctg
aaatgtgtgtgggtaatgccactatacttatccatccaagtgcatcagag
gatgtggaattaaaaaccaattatcaacacagagatttcatacagcaatc
ttttttgaagtaatttattttggcattccttttgaaatgtttaaaaacag
tgctgatcccccaaagaattatgaccctatcatcaaaatcatttctcttc
tggaattatacacacacacacacacacacacacacacacacacacacaca
cacttcaattaaataattcattagcacattcctcagttgtaaaaaaaaat
gtagatgaacacccctccattcctctgtgagaaggcagtatggtccccag
gggcaaaaacagaatactcagttctgaaaccctgcttgagtgtaagccct
gcagcttgctgctaagccatgcctcaggttgtgttccaatttcttgtgac
ttctgcctcctctgcctcaccaccaacagctcccgtttcaatgatccggt
tcaatatcctcccctccattaggtaattgcaaggagagaaaccaaggcca
aaaacatgtcccgactataaccagttatggaattgtatttaatccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_99291674_99292790
seq2: B6Ng01-265P08.b_48_1164 (reverse)

seq1  AGCAATGCGTGTTCAAGGAGTCGCAGGACCTGTCTGCTCCCTTCCCTGGG  50
      |||||||||||||| |||||| ||||||||   |||||||| ||||| ||
seq2  AGCAATGCGTGTTCCAGGAGT-GCAGGACCGTCCTGCTCCCCTCCCT-GG  48

seq1  GAGTTC--ACAGTCTGGGAATGCCCTTGGGTGGAGGCTCTGGCA-CATAA  97
      ||||||   ||||||||||||||||||||||| ||||||  ||| |||||
seq2  GAGTTCCACCAGTCTGGGAATGCCCTTGGGTGAAGGCTCCTGCACCATAA  98

seq1  ATAATTAGTGAACAGTTTTCCATTCTAGGAACACAT-GCATTATCTCATC  146
      || | |||||||||| ||||||||||| |||||||| |||||||||||||
seq2  ATTA-TAGTGAACAG-TTTCCATTCTA-GAACACATGGCATTATCTCATC  145

seq1  TTTGGTTGATGTTTTGATTCTCTGGACACAG-AGCATGGCTGTTTGGGGA  195
       |||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTTGGTTGATGTTTTGATTCTCTGGACACAGAAGCATGGCTGTTTGGGGA  195

seq1  TGCCACAAAACTTAAGCATTTGACTGAGTCTTCAAAACAACATAGAATGT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAAAACTTAAGCATTTGACTGAGTCTTCAAAACAACATAGAATGT  245

seq1  CATGCTTCATGTTCGATTCAGAGCCCCTGTCAGGAAGAGGAAGGCAGCCT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTCATGTTCGATTCAGAGCCCCTGTCAGGAAGAGGAAGGCAGCCT  295

seq1  GGAGAAGTGAGGCCTAAGTTAACAGCAGAGGACAGTCAGCCAGTGACTTC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGTGAGGCCTAAGTTAACAGCAGAGGACAGTCAGCCAGTGACTTC  345

seq1  TGTGCACTGTCCCTACCTGCACCCCCACCCCAGGCATTGGACCTTTCCAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACTGTCCCTACCTGCACCCCCACCCCAGGCATTGGACCTTTCCAG  395

seq1  CAACTCAACGTCCCTTGGAGAAAGAAACAGAGAGTGGGTGTGGAGACCTG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCAACGTCCCTTGGAGAAAGAAACAGAGAGTGGGTGTGGAGACCTG  445

seq1  TGCTTGGTTACATATTTTCAGTATGACTGAAAGGCTTTTTCCCTCCTTCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGTTACATATTTTCAGTATGACTGAAAGGCTTTTTCCCTCCTTCC  495

seq1  TGGGGATTTAGCTAGTCATCAAGCTTTCATTTAGCCTATTTGCTTTAAAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATTTAGCTAGTCATCAAGCTTTCATTTAGCCTATTTGCTTTAAAA  545

seq1  TTAGACTTTGCACAGAAAGCTTTCCATTGTATCTGCTCATTCCCTTTGAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACTTTGCACAGAAAGCTTTCCATTGTATCTGCTCATTCCCTTTGAA  595

seq1  GCCGTTCTATGTCGGTCAGTAGGATCAGGAACTTCCTTTACCTAACTCCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTTCTATGTCGGTCAGTAGGATCAGGAACTTCCTTTACCTAACTCCT  645

seq1  GAGATACTGTCTCAGCTACTCCCAGAGGGTGACTGAACAAAAGGGGGGGG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACTGTCTCAGCTACTCCCAGAGGGTGACTGAACAAAAGGGGGGGG  695

seq1  CAAAATGGTCCTGAGACCCCCTAAATTGGAGCCTAATTACAAGCTCCCTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGGTCCTGAGACCCCCTAAATTGGAGCCTAATTACAAGCTCCCTC  745

seq1  GAATTAGAGTCCACTCCCTAAGTTCAATTTTGGTTTTGCTTTTCAGATAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGAGTCCACTCCCTAAGTTCAATTTTGGTTTTGCTTTTCAGATAG  795

seq1  AGACAGAAAGGCATCTTCCATCTTTATTTAATGATCAGACCCCTTAGAAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAAAGGCATCTTCCATCTTTATTTAATGATCAGACCCCTTAGAAA  845

seq1  GATCACTGCAAGCTGGGCATGGTGGCTCACACCTTTAATCCCAGCACTCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTGCAAGCTGGGCATGGTGGCTCACACCTTTAATCCCAGCACTCA  895

seq1  GGAGACAGAGGCAGGTAATTTCTGAGTTTGAGACCAGCCTGGTCTACAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACAGAGGCAGGTAATTTCTGAGTTTGAGACCAGCCTGGTCTACAAA  945

seq1  GTGAGTTCCAGGACAGCCAGGGGAACACAGAGAAACCCTGTCTCGAACCG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTCCAGGACAGCCAGGGGAACACAGAGAAACCCTGTCTCGAACCG  995

seq1  CCCCCCTCAATAAAAAAGAAAGATCACTGCATGGAACAGGCAACCCCAGC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCTCAATAAAAAAGAAAGATCACTGCATGGAACAGGCAACCCCAGC  1045

seq1  TCCCCTTTCCAACAGTTGATAAAACCTCTATATTCCTTTTACACAGCAGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTTCCAACAGTTGATAAAACCTCTATATTCCTTTTACACAGCAGA  1095

seq1  ATAAAAAGCACTTAATGAATTC  1117
      ||||||||||||||||||||||
seq2  ATAAAAAGCACTTAATGAATTC  1117


seq1: chr5_99160859_99162038
seq2: B6Ng01-265P08.g_69_1265

seq1  GAATTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAACA  50

seq1  AACAAACAAACAAAAAGTAAGTCTCAATTTATATATAACTTCGAACATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAACAAAAAGTAAGTCTCAATTTATATATAACTTCGAACATCT  100

seq1  CATTCTTTTCTCTCTAACACTTGGAATCTATATAAACAAAACCTGCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTTTCTCTCTAACACTTGGAATCTATATAAACAAAACCTGCATGT  150

seq1  GTTCTTGAATGTTATTTTCATTCATTCAATCCTCCAGACCATTTTGAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGAATGTTATTTTCATTCATTCAATCCTCCAGACCATTTTGAACT  200

seq1  CTAATGAAGAGGACAAGTGATCTTAAATTATTCCTTTCTTCACAGGCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGAAGAGGACAAGTGATCTTAAATTATTCCTTTCTTCACAGGCACT  250

seq1  GCAAAAGACCTGAGCGTAAGGACTTACTCCAACCATTTTGAATGTAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAGACCTGAGCGTAAGGACTTACTCCAACCATTTTGAATGTAGACA  300

seq1  TAGCTTAGAAACCAGAAGGAAAGCTAACATCAGCAATTTCCCTTAGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTAGAAACCAGAAGGAAAGCTAACATCAGCAATTTCCCTTAGAAAG  350

seq1  CAAGTCTTCAATCACCACAAATGAACAAGTGAACTATACGTGACACTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTTCAATCACCACAAATGAACAAGTGAACTATACGTGACACTCTG  400

seq1  AGAGAAGCACACTCGTAAAATGGCCATGATGCTGCAGCCTCTCCCCTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGCACACTCGTAAAATGGCCATGATGCTGCAGCCTCTCCCCTTTG  450

seq1  CACTGCTCAACAGCATTCCCGCCAAGAGAGGATGAGGTCACCCTCCCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTCAACAGCATTCCCGCCAAGAGAGGATGAGGTCACCCTCCCAGG  500

seq1  CTCTGCAATCAGAGCAGACTGAGAGTCACTTTGGCCAACTGGATGGTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCAATCAGAGCAGACTGAGAGTCACTTTGGCCAACTGGATGGTCCT  550

seq1  TCTGAGGCTGTTTGCAAGAGGGAAGACAAAGAGCTATTTCTAACAGCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGCTGTTTGCAAGAGGGAAGACAAAGAGCTATTTCTAACAGCCTG  600

seq1  AAATGTGTGTGGGTAATGCCACTATACTTATCCATCCAAGTGCATCAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTGTGGGTAATGCCACTATACTTATCCATCCAAGTGCATCAGAG  650

seq1  GATGTGGAATTAAAAACCAATTATCAACACAGAGATTTCATACAGCAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGAATTAAAAACCAATTATCAACACAGAGATTTCATACAGCAATC  700

seq1  TTTTTTGAAGTAATTTATTTTGGCATTCCTTTTGAAATGTTTAAAAACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGAAGTAATTTATTTTGGCATTCCTTTTGAAATGTTTAAAAACAG  750

seq1  TGCTGATCCCCCAAAGAATTATGACCCTATCATCAAAATCATTTCTCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGATCCCCCAAAGAATTATGACCCTATCATCAAAATCATTTCTCTTC  800

seq1  TGGAATTATACACACACACACACACACACACACACACACACACACACACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTATACACACACACACACACACACACACACACACACACACACACA  850

seq1  CACTTCAATT-AATAATTCATTAGCACATTCCTCAGTTGTAAAAAAAAAT  899
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAATTAAATAATTCATTAGCACATTCCTCAGTTGTAAAAAAAAAT  900

seq1  GTAGATGAACACCCCTCCATTCCTCTGTGAG-AGGCAGTATGGTCCCCAG  948
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTAGATGAACACCCCTCCATTCCTCTGTGAGAAGGCAGTATGGTCCCCAG  950

seq1  GGGC-AGAACAG-ATACTCAGTTCTGAAACCCTGCTTGAGTGTTAGCCCT  996
      |||| | ||||| |||||||||||||||||||||||||||||| ||||||
seq2  GGGCAAAAACAGAATACTCAGTTCTGAAACCCTGCTTGAGTGTAAGCCCT  1000

seq1  GCAGCTTGCTGCTAAG-CATG-CTCAGGGTTGTGTTCC-ATTTC-TGTGA  1042
      |||||||||||||||| |||| |||| ||||||||||| ||||| |||||
seq2  GCAGCTTGCTGCTAAGCCATGCCTCA-GGTTGTGTTCCAATTTCTTGTGA  1049

seq1  C-TCTGGCTCCTCTGGCCTCA-CAC--ACAGCT-CCGTTTCACTGTATCG  1087
      | |||| ||||||| |||||| |||  |||||| |||||||| || ||| 
seq2  CTTCTGCCTCCTCT-GCCTCACCACCAACAGCTCCCGTTTCAATG-ATCC  1097

seq1  GGTTCATATCTCCT------CATTA-GTAATTGGCAG--GAGAAACC-AG  1127
      |||||| || ||||      ||||| |||||||  ||  |||||||| ||
seq2  GGTTCA-ATATCCTCCCCTCCATTAGGTAATTGCAAGGAGAGAAACCAAG  1146

seq1  GC--AAAACATGTCCCGGGCTTATAACAAGTTTATGAGATTGTATTTTAA  1175
      ||  ||||||||||||  |  |||||| || |||||  |||||| |||||
seq2  GCCAAAAACATGTCCC--GACTATAACCAG-TTATGGAATTGTA-TTTAA  1192

seq1  TCCAC  1180
      |||||
seq2  TCCAC  1197


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