BAC Information

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BAC

Clone NameB6Ng01-269F16
Chromosome5 (Build37)
Map Location 7,996,051 - 7,996,621
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042651, 4921511H03Rik, LOC242823, LOC667767, EG546855, Steap4
Downstream geneSri, LOC433840, Adam22, Dbf4, Slc25a40, Gm440, Abcb1a, EG330031, Abcb1b, Abcb4, Crot
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269F16.bB6Ng01-269F16.g
ACCGA071975GA071976
length1,198943
definitionB6Ng01-269F16.b B6Ng01-269F16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaattaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
acatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaattgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacatattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagaccaccatatccagggatccaccccataatc
agcatccaaatgctgacaccattgcatacactagcaagattttatttgaa
aggacccagatgtagctgtctcttgtgagactatgccgggggcctagcaa
acacagaagtggatgctcacagttcagctaatggatggatcatagggcct
cccaatggaggagctagagaaagtagccaaggagctaaagggatctgcaa
cccttataggtggaacaacattatgaactaccagtaccccggagctctga
ctctagctgcaatatatatcaaagatggctagtcgccatcacttgcaaga
gagctcaatggacttgcaactttatattgctcagtacagggaccccaggc
ctaacggatgatggcagccatgcgatcgatatcactgctagcgcatcg
gaattcatgctgtaaagtcccagcacagacctgagtaaggaagagagagg
cttggtgatgacagaacagggtatgtctgtcacatgattcaggtaggaag
gggatgctggttggggtcctggtataattgaggagaaattgacaatgatt
atcgttttaaaaattaaattagatatgcatgctactaaagacaatcgtga
actggtatcaccttcatcgacacagggcagcacgttctattctagtatgt
agatgcaggcaggaacagacagcgcttaggcaactgagaggctcagctgg
tgaagccaggacatgagtttgagccccagaacccaccaaagaatggatgg
tgggcagagcgaactgattccagatcacgtatgcttcctctctctacccc
cgcgtcacagaaaagcaaatgtgggttattctcactggaaagcatggatt
catctatcgctgtgtatagacgacatgaccgaggtatatataaatccctg
aagattcagttaagacatcgttaaaattggtaaattcagttatattacag
aatataagatcaacacataacagttagtagaatttctactacacaactga
aaaataaatcaaaactaactaagcaaagtatttgggataaatttattcaa
aaaggtgaaaagaactttgtaatgaaactataaagtactgatgaaagatt
tgaagaggacacacacacatacacactcacacatatatgctcacatatac
cacagtacacactcacacagactacacagacaccatactcccccactaca
gacacacacacacacatacactcacacactcacaccacacacactcacat
acatacctcacatacatacatatatacatacacacatataccacacacac
atgtatcctcacatacaacacatacacacaccacgcatataca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_7996051_7996621
seq2: B6Ng01-269F16.g_66_636 (reverse)

seq1  GTTATGTGTTGATCTTATATTCTGTAATATAACTGAATTTACCAATTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTGTTGATCTTATATTCTGTAATATAACTGAATTTACCAATTTTA  50

seq1  ACGATGTCTTAACTGAATCTTCAGGGATTTATATATACCTCGGTCATGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATGTCTTAACTGAATCTTCAGGGATTTATATATACCTCGGTCATGTC  100

seq1  GTCTATACACAGCGATAGATGAATCCATGCTTTCCAGTGAGAATAACCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATACACAGCGATAGATGAATCCATGCTTTCCAGTGAGAATAACCCA  150

seq1  CATTTGCTTTTCTGTGACGCGGGGGTAGAGAGAGGAAGCATACGTGATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCTTTTCTGTGACGCGGGGGTAGAGAGAGGAAGCATACGTGATCT  200

seq1  GGAATCAGTTCGCTCTGCCCACCATCCATTCTTTGGTGGGTTCTGGGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCAGTTCGCTCTGCCCACCATCCATTCTTTGGTGGGTTCTGGGGCT  250

seq1  CAAACTCATGTCCTGGCTTCACCAGCTGAGCCTCTCAGTTGCCTAAGCGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCATGTCCTGGCTTCACCAGCTGAGCCTCTCAGTTGCCTAAGCGC  300

seq1  TGTCTGTTCCTGCCTGCATCTACATACTAGAATAGAACGTGCTGCCCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTCCTGCCTGCATCTACATACTAGAATAGAACGTGCTGCCCTGT  350

seq1  GTCGATGAAGGTGATACCAGTTCACGATTGTCTTTAGTAGCATGCATATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGATGAAGGTGATACCAGTTCACGATTGTCTTTAGTAGCATGCATATC  400

seq1  TAATTTAATTTTTAAAACGATAATCATTGTCAATTTCTCCTCAATTATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAATTTTTAAAACGATAATCATTGTCAATTTCTCCTCAATTATAC  450

seq1  CAGGACCCCAACCAGCATCCCCTTCCTACCTGAATCATGTGACAGACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCCCAACCAGCATCCCCTTCCTACCTGAATCATGTGACAGACATA  500

seq1  CCCTGTTCTGTCATCACCAAGCCTCTCTCTTCCTTACTCAGGTCTGTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTCTGTCATCACCAAGCCTCTCTCTTCCTTACTCAGGTCTGTGCT  550

seq1  GGGACTTTACAGCATGAATTC  571
      |||||||||||||||||||||
seq2  GGGACTTTACAGCATGAATTC  571