BAC Information

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BAC

Clone NameB6Ng01-270B03
Chromosome5 (Build37)
Map Location 82,687,017 - 82,688,054
singlet/doubletsinglet
Overlap genenone
Upstream geneLphn3
Downstream geneEG433912, LOC100039434
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270B03.bB6Ng01-270B03.g
ACCGA072507GA072508
length1,0431,001
definitionB6Ng01-270B03.b B6Ng01-270B03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttggaactgatgttgcgttccactcacctgtgttcctgaggtc
ctgggtgtgctaggggtgctctggggggcttgctgctatccactgggttc
aggcagaatatggtagggctcctggcatgcatttttacacaaatttcata
atttactttttctagctaaataaaatttcatttttctgttgattaacatc
taggctgatctcatgtttctccttttgtgaaaaagatgaatggagagcct
gtctagagtaggagacagtctcctgacagtatatgcctaggagagtgtct
tacttacttttcaattgctgtgataagaaaccacgaccaagccaatttta
aagatgacatttaattcatcttatggtttcataggattaaagtccatgtt
gtcatagcaaaagtatagtgtcaggaacagccaagaacatgcatcttaat
tcacaagcacgagacagagaaagtaacgtgggaagtgggacacatttttg
aaaactcaaagcctgtctccagtaacacaagtcttccaagatcatccttc
cttgtctatcctaaacagatccacgacttgggaataaagtattcaatcat
atgagtctatatgggtcagtctcattccaactaccacattcttggtacca
taaccttgtggtcacaccataattcaaaatgcaaaagtctccattgtctt
ccaggatcaacactatttaaaagtccaaagtttaaaacctcttctgagag
tcaagaatacctgtaaactgtaaactcctataaataaataaaataattaa
ctaaataattaaaataaaaattaaaaaggcaaaagcaaattacacacatc
gaacatagaaaggcacggaataagcattaccattccaaacgggagtaatc
aaggcatagtgacaaaatactagaacaaggtaaatctgatatcaaatatg
tcaccaggaccaatgatgaaagggaccaaagtaagactgattatcaaatt
ttgtagcattatttattgttctaatacagtttggaatgataca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccat
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataaatttgccaaacacatgaaactcaa
gaagaatgaagactgaagtgtgaacactatgcccctccttagatttggga
acaaaacacccatggaaggagttacatagacaaagtttggagctgagatt
gaaaggatggaccatgtagatacttgccatatccagggatccaccccata
atcagcatccaaacgctgacaccattgcatacactagcaagattttatga
aaggactcagatgtagctgtctcttgtgagactatgccggggcctagcaa
cacagaagtgatgctcacagtcaactaatggatggatcatagggctccca
aatggagagctaaagaagtagctaacgagctaaagggatcttgcacccta
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_82687017_82688054
seq2: B6Ng01-270B03.b_46_1088

seq1  GAATTCTTTGGAACTGATGTTGCGTTCCACTCACCTGTGTTCCTGAGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGAACTGATGTTGCGTTCCACTCACCTGTGTTCCTGAGGTC  50

seq1  CTGGGTGTGCTAGGGGTGCTCTGGGGGGCTTGCTGCTATCCACTGGGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGTGCTAGGGGTGCTCTGGGGGGCTTGCTGCTATCCACTGGGTTC  100

seq1  AGGCAGAATATGGTAGGGCTCCTGGCATGCATTTTTACACAAATTTCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAATATGGTAGGGCTCCTGGCATGCATTTTTACACAAATTTCATA  150

seq1  ATTTACTTTTTCTAGCTAAATAAAATTTCATTTTTCTGTTGATTAACATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTTTTTCTAGCTAAATAAAATTTCATTTTTCTGTTGATTAACATC  200

seq1  TAGGCTGATCTCATGTTTCTCCTTTTGTGAAAAAGATGAATGGAGAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTGATCTCATGTTTCTCCTTTTGTGAAAAAGATGAATGGAGAGCCT  250

seq1  GTCTAGAGTAGGAGACAGTCTCCTGACAGTATATGCCTAGGAGAGTGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGAGTAGGAGACAGTCTCCTGACAGTATATGCCTAGGAGAGTGTCT  300

seq1  TACTTACTTTTCAATTGCTGTGATAAGAAACCACGACCAAGCCAATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACTTTTCAATTGCTGTGATAAGAAACCACGACCAAGCCAATTTTA  350

seq1  AAGATGACATTTAATTCATCTTATGGTTTCATAGGATTAAAGTCCATGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGACATTTAATTCATCTTATGGTTTCATAGGATTAAAGTCCATGTT  400

seq1  GTCATAGCAAAAGTATAGTGTCAGGAACAGCCAAGAACATGCATCTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAGCAAAAGTATAGTGTCAGGAACAGCCAAGAACATGCATCTTAAT  450

seq1  TCACAAGCACGAGACAGAGAAAGTAACGTGGGAAGTGGGACACATTTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGCACGAGACAGAGAAAGTAACGTGGGAAGTGGGACACATTTTTG  500

seq1  AAAACTCAAAGCCTGTCTCCAGTAACACAAGTCTTCCAAGATCATCCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCAAAGCCTGTCTCCAGTAACACAAGTCTTCCAAGATCATCCTTC  550

seq1  CTTGTCTATCCTAAACAGATCCACGACTTGGGAATAAAGTATTCAATCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTATCCTAAACAGATCCACGACTTGGGAATAAAGTATTCAATCAT  600

seq1  ATGAGTCTATATGGGTCAGTCTCATTCCAACTACCACATTCTTGGTACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTCTATATGGGTCAGTCTCATTCCAACTACCACATTCTTGGTACCA  650

seq1  TAACCTTGTGGTCACACCATAATTCAAAATGCAAAAGTCTCCATTGTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTGTGGTCACACCATAATTCAAAATGCAAAAGTCTCCATTGTCTT  700

seq1  CCAGGATCAACACTATTTAAAAGTCCAAAGTTTAAAACCTCTTCTGAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGATCAACACTATTTAAAAGTCCAAAGTTTAAAACCTCTTCTGAGAG  750

seq1  TCAAGAATACCTGTAAACTGTAAACTCCTATAAATAAATAAAATAATTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAATACCTGTAAACTGTAAACTCCTATAAATAAATAAAATAATTAA  800

seq1  CTAAATAATTAAAATAAAAATTAAAAAGGCAAAAGCAAATTACACACATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATAATTAAAATAAAAATTAAAAAGGCAAAAGCAAATTACACACATC  850

seq1  GAACATAGAAAGGCACGGAATAAGCATTACCATTCCAAACGGGAGTAATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATAGAAAGGCACGGAATAAGCATTACCATTCCAAACGGGAGTAATC  900

seq1  AAGGCATAGTGACAAAATACTAGAACAAGGTAAATCTGATATCAAATATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATAGTGACAAAATACTAGAACAAGGTAAATCTGATATCAAATATG  950

seq1  TCACCAGGACCAATGATG-AAGGGACCAAAGTAAGACTGA-TATCAAATT  998
      |||||||||||||||||| ||||||||||||||||||||| |||||||||
seq2  TCACCAGGACCAATGATGAAAGGGACCAAAGTAAGACTGATTATCAAATT  1000

seq1  TTGTAGCATTA-TTAT--GTCTAATACAGTATGGAATGATACA  1038
      ||||||||||| ||||   ||||||||||| ||||||||||||
seq2  TTGTAGCATTATTTATTGTTCTAATACAGTTTGGAATGATACA  1043