BAC Information

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BAC

Clone NameB6Ng01-271J14
Chromosome5 (Build37)
Map Location 131,601,983 - 131,740,655
singlet/doubletdoublet
Overlap geneWbscr17
Upstream geneTpst1, Kctd7, Rabgef1, 0610007L01Rik, EG625540, Sbds, Tyw1, A330070K13Rik, Caln1
Downstream geneAuts2, 4930563F08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271J14.bB6Ng01-271J14.g
ACCGA073636GA073637
length711438
definitionB6Ng01-271J14.b B6Ng01-271J14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,739,945 - 131,740,655)(131,601,983 - 131,602,426)
sequence
gaattctacaacacccgggacctcactgcctgccagctgccctcagtgtg
tttaagcccagagacatcttaaacacaaggcaaaggctcctgagaaacaa
taattggggttatcttctggcttctacttgcatgcactcacacacacatg
tgtgaacacacacacacacacacacacacaaaggtgcaggcacacatatg
cctctcctctgagaaacttgaaactagcagaaaccccatccccactcaag
ttctgccgcagtctgtctgctttgcttatttatatcattgttgggaattt
ggctcagtagttcattttcaaagtagcctccgaaatagttttctaatatt
atcccctccgcccttcatctatctttcactgtgggattcattggggagta
cagcgtgtgcttcccgtcagctcgttgctggcctgaatacagactgcacc
tgtcctgggtgaggctgggaaatgacggatgaccatgcttcccggggagg
gtcaggccactttatactttgaaatatccatcgctctggtcacatcacaa
gtgccttaaccacaaatgtatctcataagaaatggggccagcgaggatag
agaagggccttaatggaaaggcagccatttaaacggaaaatgtacttaat
ggtctgtgggaagtgtgtgtgtgtgtgtgtgcttgtgtgtgtgtgtgtgt
gtgtgtgtgtg

tacacgttcaaaactgctttggggtcaggagactatagaagaggtgtggt
ggttagtgttggctgcagaagaataaggacctgagttcagatcccaggta
tccacttaaaaagtgaggcatggcggtgcattcctgtatatacaaaccta
gggagcaaagacaggtaaattctgggtggctgaggagggctcatttgcca
gccattgtagcttaatatgtaagccttaggttcactcatagatcccttta
atcccagcacttggggagttgaggctggtagatatctgtgagtttgaagc
cagactggtctacagagtgagttccatggaagctggggctacacagagaa
aacctgtcacacaaaaagaaaaaaagaaagaaagaaagaaagaaagaaag
aaagaaagaaagaaaaggaaggggaggggaggggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_131739945_131740655
seq2: B6Ng01-271J14.b_46_756 (reverse)

seq1  CACACACACACACACACACACACACACAAGCACACACACACACACACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACAAGCACACACACACACACACACT  50

seq1  TCCCACAGACCATTAAGTACATTTTCCGTTTAAATGGCTGCCTTTCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACAGACCATTAAGTACATTTTCCGTTTAAATGGCTGCCTTTCCATT  100

seq1  AAGGCCCTTCTCTATCCTCGCTGGCCCCATTTCTTATGAGATACATTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCCTTCTCTATCCTCGCTGGCCCCATTTCTTATGAGATACATTTGT  150

seq1  GGTTAAGGCACTTGTGATGTGACCAGAGCGATGGATATTTCAAAGTATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAGGCACTTGTGATGTGACCAGAGCGATGGATATTTCAAAGTATAA  200

seq1  AGTGGCCTGACCCTCCCCGGGAAGCATGGTCATCCGTCATTTCCCAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCCTGACCCTCCCCGGGAAGCATGGTCATCCGTCATTTCCCAGCCT  250

seq1  CACCCAGGACAGGTGCAGTCTGTATTCAGGCCAGCAACGAGCTGACGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGGACAGGTGCAGTCTGTATTCAGGCCAGCAACGAGCTGACGGGA  300

seq1  AGCACACGCTGTACTCCCCAATGAATCCCACAGTGAAAGATAGATGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACGCTGTACTCCCCAATGAATCCCACAGTGAAAGATAGATGAAGG  350

seq1  GCGGAGGGGATAATATTAGAAAACTATTTCGGAGGCTACTTTGAAAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAGGGGATAATATTAGAAAACTATTTCGGAGGCTACTTTGAAAATGA  400

seq1  ACTACTGAGCCAAATTCCCAACAATGATATAAATAAGCAAAGCAGACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTGAGCCAAATTCCCAACAATGATATAAATAAGCAAAGCAGACAGA  450

seq1  CTGCGGCAGAACTTGAGTGGGGATGGGGTTTCTGCTAGTTTCAAGTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGGCAGAACTTGAGTGGGGATGGGGTTTCTGCTAGTTTCAAGTTTCT  500

seq1  CAGAGGAGAGGCATATGTGTGCCTGCACCTTTGTGTGTGTGTGTGTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAGAGGCATATGTGTGCCTGCACCTTTGTGTGTGTGTGTGTGTGT  550

seq1  GTGTGTTCACACATGTGTGTGTGAGTGCATGCAAGTAGAAGCCAGAAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTCACACATGTGTGTGTGAGTGCATGCAAGTAGAAGCCAGAAGAT  600

seq1  AACCCCAATTATTGTTTCTCAGGAGCCTTTGCCTTGTGTTTAAGATGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCAATTATTGTTTCTCAGGAGCCTTTGCCTTGTGTTTAAGATGTCT  650

seq1  CTGGGCTTAAACACACTGAGGGCAGCTGGCAGGCAGTGAGGTCCCGGGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTTAAACACACTGAGGGCAGCTGGCAGGCAGTGAGGTCCCGGGTG  700

seq1  TTGTAGAATTC  711
      |||||||||||
seq2  TTGTAGAATTC  711


seq1: chr5_131601983_131602426
seq2: B6Ng01-271J14.g_68_511

seq1  GAATTCTACACGTTCAAAACTGCTTTGGGGTCAGGAGACTATAGAAGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACACGTTCAAAACTGCTTTGGGGTCAGGAGACTATAGAAGAGG  50

seq1  TGTGGTGGTTAGTGTTGGCTGCAGAAGAATAAGGACCTGAGTTCAGATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGGTTAGTGTTGGCTGCAGAAGAATAAGGACCTGAGTTCAGATCC  100

seq1  CAGGTATCCACTTAAAAAGTGAGGCATGGCGGTGCATTCCTGTATATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTATCCACTTAAAAAGTGAGGCATGGCGGTGCATTCCTGTATATACA  150

seq1  AACCTAGGGAGCAAAGACAGGTAAATTCTGGGTGGCTGAGGAGGGCTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGGGAGCAAAGACAGGTAAATTCTGGGTGGCTGAGGAGGGCTCAT  200

seq1  TTGCCAGCCATTGTAGCTTAATATGTAAGCCTTAGGTTCACTCATAGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAGCCATTGTAGCTTAATATGTAAGCCTTAGGTTCACTCATAGATC  250

seq1  CCTTTAATCCCAGCACTTGGGGAGTTGAGGCTGGTAGATATCTGTGAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAATCCCAGCACTTGGGGAGTTGAGGCTGGTAGATATCTGTGAGTT  300

seq1  TGAAGCCAGACTGGTCTACAGAGTGAGTTCCATGGAAGCTGGGGCTACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCAGACTGGTCTACAGAGTGAGTTCCATGGAAGCTGGGGCTACAC  350

seq1  AGAGAAAACCTGTCACACAAAAAGAAAAAAAGAAAGAAAGAAAGAAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAACCTGTCACACAAAAAGAAAAAAAGAAAGAAAGAAAGAAAGAA  400

seq1  AGAAAGAAAGAAAGAAAGAAAAGGAAGGGGAGGGGAGGGGAGGG  444
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAAAGAAAGAAAAGGAAGGGGAGGGGAGGGGAGGG  444


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