BAC Information

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BAC

Clone NameB6Ng01-273L09
Chromosome5 (Build37)
Map Location 4,677,769 - 4,678,289
singlet/doubletsinglet
Overlap genenone
Upstream gene4930511M11Rik, Ankib1, Krit1, 4932412H11Rik, LOC100041009, LOC667617, Mterf, Akap9, Cyp51, ENSMUSG00000053178, LOC100041073
Downstream geneFzd1, LOC667678, Pftk1, 1700015F17Rik, Cldn12, Gtpbp10, LOC667699, EG667705, A330021E22Rik, Steap2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273L09.bB6Ng01-273L09.g
ACCGA075211GA075212
length7541,186
definitionB6Ng01-273L09.b B6Ng01-273L09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttatctctgtatcccatttttaatttgagtttctggagt
ccagcttcttgagctctttgtatgtattgggtattagtcccctatcagat
ttaggattggtaaaaatcctttcccaatctgtggtggtctttttgtctta
ttgacggtgtctttttgccttacagaagctttgcaatttcatgaggtccc
atttgtcaatacttgatcttacagcacaagccattgctgttctgtttagg
aatttttcccctgtgcccataccttcaaggcttttccccactttctcctc
tattaatttcagtatctctggttttatgtctttgatccacgtagacttga
gctttgtacaaggagataagaacagataaattcatttatacttttcttat
tttctctctctctctctctctctccctctctctctctctctctctctctc
tcacacacacacacacacacacacacacacacacacacacacacacacac
acacagacacacacattaccccctccctcaaaatctcctcccattcctta
atgtcctcttcctaggttttctggcttctaaaattactccaagtaaaaca
caggtctaaattttcctagcttgtatccacacaggacatagaacaagcat
acttgtcttttctggttttcactccagaaatgtctttttctctcccatct
gtttacaagagtatatttttaaaaggaaaatttaaaacttatttttcagc
attt
gaattcctaaacctgataaacatcttcaatgcagtagttggatataaaat
tatctcaaataaatcaatggcctttctctacacaaaggataaacggactg
agaaagaaattagggaaacaacacccttcacaatagtcacaaatagtata
aaataccttggtgtgactctaactaaggaagtgaaagatctgtatgataa
gaacttcaagtctctgaagaaagaaattgaagaagatctcagaagatgga
aagatctcccatgctcatggattggcaggattaatatagtaaaaatggct
atcttgccaaaagcaatctacagattcaatgcaatccccatcaaaattcc
aactcaattcttcactcaaatagaaaaggcaatttgcaaattcatctgga
aaaataaaaaacctaggatagcaaaaactattctcaacaataaaagaacc
tctggtggaatcaccatgcctgacattaagctgtactacagagcaattgt
gataaaaactgcatggtactggtacagtgacagacaggtagatcaatgga
atagaattgaagacccagaaatgaatccacacacctatggtcacttactc
tttgacaagggagctaaaaccatccagtggaaaaaagacaacattttcaa
caaatggtgctggcacaactggcggttatcatgtagaagaatgtgaattg
atccacaccttgtactaaagtcaaatctaagtggttcaagaaaaccagag
acactgaaactttatagaggagaaagtggggaaaagcctcgaagatatgg
gtacaggggaaaattcctgaatagaacagaaatggcttgtgctgtaagat
cgagaattgataaatgggacctcataaaattgcaaagcttctgtaaggca
aagacactatcaataagacaaaaaggcaccaccagattggaaaggatctt
tacctatcctaattcagacaggggactaatatccaatatatacaaagagc
tcaagaatctgactcttagaaattcaatactccataaaaacagggtttca
gagcctaaacaaggattatcaagtgaagatactaatgcctgaaagcacct
ggaaaacctgttcagcatcctttaatcatcaggatcgtaggtaaacagct
gtgagatcaccttctcacatcagtcagaaaggtggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_4677769_4678289
seq2: B6Ng01-273L09.b_269_797 (reverse)

seq1  AAATGCTG-AAAATAAGTTTTAAATTTTCC-TTTAAAAATATACTCTTGT  48
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  AAATGCTGAAAAATAAGTTTTAAATTTTCCTTTTAAAAATATACTCTTGT  50

seq1  AAACAGATGGGAGAG-AAAAGACA-TTCT-GAGTGAAAACCAG-AAAGAC  94
      ||||||||||||||| |||||||| |||| ||||||||||||| ||||||
seq2  AAACAGATGGGAGAGAAAAAGACATTTCTGGAGTGAAAACCAGAAAAGAC  100

seq1  AAGTATGCTTGTTCTATGTCCTGTGTGGATACAAGCTAGGAAAATTTAGA  144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATGCTTGTTCTATGTCCTGTGTGGATACAAGCTAGGAAAATTTAGA  150

seq1  CCTGTGTTTAACTTGGAGTAATTTTAGAAGCCAGAAAA-CTAGGAAGAGG  193
      ||||||||| |||||||||||||||||||||||||||| |||||||||||
seq2  CCTGTGTTTTACTTGGAGTAATTTTAGAAGCCAGAAAACCTAGGAAGAGG  200

seq1  ACATTAAGGAATGGGAGGAGATTTTGAGGGA-GGGGTAATGTGTGTGTCT  242
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACATTAAGGAATGGGAGGAGATTTTGAGGGAGGGGGTAATGTGTGTGTCT  250

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  300

seq1  GTGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGA  350

seq1  GAAAATAAGAAAAGTATAAATGAATTTATCTGTTCTTATCTCCTTGTACA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAAGAAAAGTATAAATGAATTTATCTGTTCTTATCTCCTTGTACA  400

seq1  AAGCTCAAGTCTACGTGGATCAAAGACATAAAACCAGAGATACTGAAATT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCAAGTCTACGTGGATCAAAGACATAAAACCAGAGATACTGAAATT  450

seq1  AATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGGTATGGGCACAGGGGAAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGGTATGGGCACAGGGGAAA  500

seq1  AATTCCTAAACAGAACAGCAATGGCTTGT  521
      |||||||||||||||||||||||||||||
seq2  AATTCCTAAACAGAACAGCAATGGCTTGT  529