BAC Information

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BAC

Clone NameB6Ng01-274A08
Chromosome5 (Build37)
Map Location 84,791,863 - 84,793,060
singlet/doubletsinglet
Overlap geneEpha5
Upstream geneLOC100039608, LOC231368, LOC100039489
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274A08.bB6Ng01-274A08.g
ACCGA075434GA075435
length1,192957
definitionB6Ng01-274A08.b B6Ng01-274A08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctagtgtgaacctgtttctttgatacagaaagtcaaatttgtaa
ttctaaaggagtcgtatgcaaagtggcagaaattactcatgtcttcagaa
aggaagaatgaggagatgacgggctagaagttgaagtgacagagaagtat
gtactacattgtacatggatggtcatcaaatgcttttgctaccatacttt
tatgcagtaatataccctatattctctgagttcatagtaagtattttctg
tctattaagctagcaaacattcttatacagtacaaccaactgaagattgg
caataataataataacaataacatatttacttatctggatctggacagca
ttagcacattactcttttttgttgtttttatttttttattttattttttt
aatattttttattattacgtattttcctcaattacatttagaatgctatc
ccaaaagtcccccataccctcccctccacttccctacccacccattccca
ttttttggccctggcattcccctgtactggggcatataaagtttgtgtgt
ccaatgggcctctttccagtgatggccaactaggccatcttttgatacat
atgcagctagagtcaagacctccggggtactggttagttcataatgttgt
tgcacctacagggttgcagatctctttagctccttggatactttctctag
ctcctcctaaagtacagcattttaaggggtttttgttgttgttgttgttg
ttgttgttaaaatatttttcttatattctgactaattactaataaaatct
gaacaactttgaaattgttttcaatgtaaagcctcacacttaatcttaca
tcacattgtaacacttctctaagagtatgagtgatttctaaagagtacta
aaaagggtacatccataaagatacacacacatgtacacacacaggtacac
acacacaagcattcacaaagagagagtgagagacaaagagacagagagat
agatgaggaaagagaatgacgagacagagaaacgatccagacgacagacg
gacccctcccccccgaggaaggaagaagagaagaagaagagtgagaagca
taagaggacgagacgcattttttttgtaccttcatgtcatctctggtccc
ttcctgtctaccattatgaacatttggccttcaaacatgaga

gaattctcacctgaggaatacagaatggctgagaaacacctgaaaaaaat
gttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccatctcacaccagccagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttgtt
gggattgcaagttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatggtactattagaggatcctgcaatacctctcctgggc
atatatccagaagattttccaactagtaagaaagaaacatcctccactat
gttcatagcagccttatttataatagccagcagctggaaagaacccagat
ggccctcaacagaggaatggatacaaaaatgtggtacatttacacaatgg
agtactactcatctactaaaaagaataaatttatgaaactcctaggcaaa
tgttggacctggaaagcattatgctgagtgaggtaacccaatcacaaaat
tactcaaatgatatgtactcactgataagtagatattagcccagatactt
agaatacccaatatataagttacaatttgcaaaacacatcaaactcaaga
agaatgaagaccaaagtgtggacactttgccccatcataattttgcttac
caatgttataactctcctcacacctagtcttagatggcagcttagaagtc
attatctttatggtccatgttgataacactaatcaactctcaaattacag
tgtttaacaccagcaaatattccttcattctggcacacttgttttcttaa
atgcacttgacatgtacatgaccttaaattgcaggcaacctgacaacttg
ttcttttgtcaaactatataactactgtgcttacagagtattcattatac
ttcttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_84791863_84793060
seq2: B6Ng01-274A08.b_50_1241

seq1  GAATTCCTAGTGTGAACCTGTTTCTTTGATACAGAAAGTCAAATTTGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGTGTGAACCTGTTTCTTTGATACAGAAAGTCAAATTTGTAA  50

seq1  TTCTAAAGGAGTCGTATGCAAAGTGGCAGAAATTACTCATGTCTTCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAGGAGTCGTATGCAAAGTGGCAGAAATTACTCATGTCTTCAGAA  100

seq1  AGGAAGAATGAGGAGATGACGGGCTAGAAGTTGAAGTGACAGAGAAGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAATGAGGAGATGACGGGCTAGAAGTTGAAGTGACAGAGAAGTAT  150

seq1  GTACTACATTGTACATGGATGGTCATCAAATGCTTTTGCTACCATACTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTACATTGTACATGGATGGTCATCAAATGCTTTTGCTACCATACTTT  200

seq1  TATGCAGTAATATACCCTATATTCTCTGAGTTCATAGTAAGTATTTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGTAATATACCCTATATTCTCTGAGTTCATAGTAAGTATTTTCTG  250

seq1  TCTATTAAGCTAGCAAACATTCTTATACAGTACAACCAACTGAAGATTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTAAGCTAGCAAACATTCTTATACAGTACAACCAACTGAAGATTGG  300

seq1  CAATAATAATAATAACAATAACATATTTACTTATCTGGATCTGGACAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATAATAATAACAATAACATATTTACTTATCTGGATCTGGACAGCA  350

seq1  TTAGCACATTACTCTTTTTTGTTGTTTTTATTTTTTTATTTTATTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCACATTACTCTTTTTTGTTGTTTTTATTTTTTTATTTTATTTTTTT  400

seq1  AATATTTTTTATTATTACGTATTTTCCTCAATTACATTTAGAATGCTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTTTATTATTACGTATTTTCCTCAATTACATTTAGAATGCTATC  450

seq1  CCAAAAGTCCCCCATACCCTCCCCTCCACTTCCCTACCCACCCATTCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGTCCCCCATACCCTCCCCTCCACTTCCCTACCCACCCATTCCCA  500

seq1  TTTTTTGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAGTTTGTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAGTTTGTGTGT  550

seq1  CCAATGGGCCTCTTTCCAGTGATGGCCAACTAGGCCATCTTTTGATACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGGGCCTCTTTCCAGTGATGGCCAACTAGGCCATCTTTTGATACAT  600

seq1  ATGCAGCTAGAGTCAAGACCTCCGGGGTACTGGTTAGTTCATAATGTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGCTAGAGTCAAGACCTCCGGGGTACTGGTTAGTTCATAATGTTGT  650

seq1  TGCACCTACAGGGTTGCAGATCTCTTTAGCTCCTTGGATACTTTCTCTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCTACAGGGTTGCAGATCTCTTTAGCTCCTTGGATACTTTCTCTAG  700

seq1  CTCCTCCTAAAGTACAGCATTTTAAGGGGTTTTTGTTGTTGTTGTTGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTAAAGTACAGCATTTTAAGGGGTTTTTGTTGTTGTTGTTGTTG  750

seq1  TTGTTGTTAAAATATTTTTCTTATATTCTGACTAATTACTAATAAAATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTAAAATATTTTTCTTATATTCTGACTAATTACTAATAAAATCT  800

seq1  GAACAACTTTGAAATTGTTTTCAATGTAAAGCCTCACACTTAATCTTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACTTTGAAATTGTTTTCAATGTAAAGCCTCACACTTAATCTTACA  850

seq1  TCACATTGTAACACTTCTCTAAGAGTATGAGTGATTTCTAAAGAGTACTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTGTAACACTTCTCTAAGAGTATGAGTGATTTCTAAAGAGTACTA  900

seq1  AAAAGGGTACATCCATAAAGATACACACACATGTACACACACAGGTACAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGTACATCCATAAAGATACACACACATGTACACACACAGGTACAC  950

seq1  ACACACAAGCATTCACAAAGAGAGAGTGAGAGACAAAGAGACAGAGAGAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAAGCATTCACAAAGAGAGAGTGAGAGACAAAGAGACAGAGAGAT  1000

seq1  AGATGAGGAAAGAGAATGACAGAGACAGAGAAACAGAT-CAGACAGACAG  1049
      |||||||||||||||||||| ||||||||||||| ||| ||||| |||||
seq2  AGATGAGGAAAGAGAATGAC-GAGACAGAGAAAC-GATCCAGAC-GACAG  1047

seq1  ACAGACACACACACACACAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAG  1099
      || ||| | | | | | | ||| |||  ||| ||||| ||| ||| ||||
seq2  ACGGAC-CCCTC-CCCCCCGAGGAAGGAAGA-AGAGA-AGA-AGA-AGAG  1091

seq1  AGAGAGAG----AGAGAGAGAGAATATATATATATTAACCTTCTTGTCAT  1145
       |||| ||    ||||   ||||     | | | |  |||||| ||||||
seq2  TGAGA-AGCATAAGAGGACGAGACGCATTTTTTTTGTACCTTCATGTCAT  1140

seq1  CT---GTTCCTTCCCTTGGTTCTACCATTAATGAACATTTGGCTTTC-AA  1191
      ||   || ||||||  ||  ||||||||| ||||||||||||| ||| ||
seq2  CTCTGGTCCCTTCC--TG--TCTACCATT-ATGAACATTTGGCCTTCAAA  1185

seq1  CATGAGA  1198
      |||||||
seq2  CATGAGA  1192


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