BAC Information

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BAC

Clone NameB6Ng01-276M20
Chromosome5 (Build37)
Map Location 151,790,868 - 151,974,263
singlet/doubletdoublet
Overlap geneKl, LOC667510, Stard13
Upstream geneRxfp2, LOC667470, Fry, LOC100042068, Gm5, XM_359419, Brca2, B230342M21Rik, BC037393, Aprin, LOC100040180
Downstream geneLOC630708, LOC625175, LOC100042166, EG435877, EG632649, EG632671, Rfc3
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276M20.bB6Ng01-276M20.g
ACCGA077489GA077490
length1,1461,062
definitionB6Ng01-276M20.b B6Ng01-276M20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,973,134 - 151,974,263)(151,790,868 - 151,791,932)
sequence
gaattcaccttccagcaattttgcagaaagtatctgcaggcgtttctgga
ggacatggaaagattgatgctttccagctgtcaagaaaaccctcaggtta
tggcttgaggaggttgtatcccatccatcagccgccatgttttctttctt
agaatcgaggtaactgggctctaatccagaaagatggactgccccccacc
ccctgccacttctttgagcagcgtagcatccttgaagtctgcaagcccac
cctgtctagagagctcacctccatgcagacaccattgcgctagcatctgt
attcctcctggaagggttaggatagagcagtggcaaacttctcgtgagat
ccattttagtcatttcagtgacgaccacaaactcccaaaggcactacctc
ttagcaattaacataattgttttctacatcatgtgtactgttggcatgtg
tattaatcattatcactgcaaccaaataaccaacagaaacaatggaagaa
tagttgacttgggctttatgttttggggtttgttgtaagggagaatgccc
attgtaaaagtgtttcatctcaatccagggtttctacctcgtctttgact
agtcagttcccagataaaagacacacacaacctttatatttacaataagc
cttaaacagcacaagagttgggcagatatataccctctgtgctattataa
tctattccctatctataactccaagttattaattactatgtttcatctgg
gctgttcttaactccaattggccagtcctccctccgggccacgttttcat
gaactcacctaacccgtggtggcttttccttcatcttcaccttctctcct
ctcctggttctcctcccaccccagagataacatgcccctggggaccttta
ctcagtgacctatttcctccagctaggctttaccttttatgttcctagaa
catcttaaaatagtctcttccacctgagaacaagcattttaccactttgg
gcctgcaaagcctattttcaatattcaacattaagtatcttaagaaaaac
acttgaccagagttaaactgtgtacaagaatgatgaactgctgccatggt
gtgacgcaataagccataataaaaacagatttactgcttctcaagg

gaattcagttgtgcacctcttgcttgctggagttgttgaagttatgtctg
cacttttttgggtccgcccagatagctaacagttgctctgttctttgtag
gtggacactactctctctcagtttactgacccgaatgtctatctgtggga
tgtgcatcacagtaagaggcttattaaagtagacggggttgtagccaaga
agagaaaaccttactgtgttgatttctctgccatccggcctcagataacc
ttacttcgagaaatgcgggtcacccactttcgcttctccctggactgggc
cctgatcttgcctctgggtaaccagacccaagtgaaccacacggttctgc
acttctaccgctgcatgatcagcgagctggtgcacgccaacatcactcca
gtggtggccctgtggcagccagcagccccgcaccaaggcctgccacatgc
ccttgcaaaacatggggcctgggagaacccgcacactgctctggcgtttg
cagactacgcaaacctgtgttttaaagagttgggtcactgggtcaatctc
tggatcaccatgaacgagccaaacacacggaacatgacctatcgtgccgg
gcaccacctcctgagagcccatgccttggcttggcatctgtacgatgaca
agtttagggcggctcagaaaggcaaaatatccatcgccttgcaggctgac
tggatagaaccggcctgccctttctctcaaaatgacaaagaagtggccga
gagagttttggaatttgatataggctggctggcagagcctatttttggtt
ccggagattatccacgtgtgatgagggactggctgaaccaaaaaaacaat
tttcttttgccctatttcaccgaagatgaaaaaaaagctagtcccggggt
tcctttgacttcctggcggtgagtcattacacccaccattctggtagact
gggaaaaggaggatccgatgaatacaacgattacttggagtacagagatg
actgacatcacatggctcaactctcccagtcagtgcagtggtgcgtgggg
cctgcgcaaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_151973134_151974263
seq2: B6Ng01-276M20.b_48_1193 (reverse)

seq1  CCTTGAG-AGCAGTAATCCTGTTT---ATATGGC-TATTGCGTCACA-CA  44
      ||||||| ||||||||  ||||||    |||||| |||||||||||| ||
seq2  CCTTGAGAAGCAGTAAATCTGTTTTTATTATGGCTTATTGCGTCACACCA  50

seq1  TGGCACCAG-TCATCA-TCTTGTACACAG-TTAACTCTGGTCAAGTGTTT  91
      ||||| ||| |||||| |||||||||||| ||||||||||||||||||||
seq2  TGGCAGCAGTTCATCATTCTTGTACACAGTTTAACTCTGGTCAAGTGTTT  100

seq1  T--CTAAGATACTTAATGTTGAATAT--GAAATAGGCTTTGCAGGCCC-A  136
      |   ||||||||||||||||||||||   ||||||||||||||||||| |
seq2  TTCTTAAGATACTTAATGTTGAATATTGAAAATAGGCTTTGCAGGCCCAA  150

seq1  AGT-GTAAAATGCTTGTTCTCAGGTGG-AGAGACTATTTTAAGATGTTCT  184
      ||| ||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGTGGTAAAATGCTTGTTCTCAGGTGGAAGAGACTATTTTAAGATGTTCT  200

seq1  AGGAACATAAAAGGTAAAGCCTAGCTGGAGGAAATAGGTCACTGAGTAAA  234
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACATAAAAGGTAAAGCCTAGCTGGAGGAAATAGGTCACTGAGTAAA  250

seq1  GGTCCCCAGGGGCATGTTATCTCTGGGGTGGGAGGAGAACCAGGAGAGGA  284
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCCAGGGGCATGTTATCTCTGGGGTGGGAGGAGAACCAGGAGAGGA  300

seq1  GAGAAGGTGAAGATGAAGGAAAAGCCACCACGGGTTAGGTGAGTTCATGA  334
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGTGAAGATGAAGGAAAAGCCACCACGGGTTAGGTGAGTTCATGA  350

seq1  AAACGTGGCCCGGAGGGAGGACTGGCCAATTGGAGTTAAGAACAGCCCAG  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGTGGCCCGGAGGGAGGACTGGCCAATTGGAGTTAAGAACAGCCCAG  400

seq1  ATGAAACATAGTAATTAATAACTTGGAGTTATAGATAGGGAATAGATTAT  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACATAGTAATTAATAACTTGGAGTTATAGATAGGGAATAGATTAT  450

seq1  AATAGCACAGAGGGTATATATCTGCCCAACTCTTGTGCTGTTTAAGGCTT  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCACAGAGGGTATATATCTGCCCAACTCTTGTGCTGTTTAAGGCTT  500

seq1  ATTGTAAATATAAAGGTTGTGTGTGTCTTTTATCTGGGAACTGACTAGTC  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAATATAAAGGTTGTGTGTGTCTTTTATCTGGGAACTGACTAGTC  550

seq1  AAAGACGAGGTAGAAACCCTGGATTGAGATGAAACACTTTTACAATGGGC  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACGAGGTAGAAACCCTGGATTGAGATGAAACACTTTTACAATGGGC  600

seq1  ATTCTCCCTTACAACAAACCCCAAAACATAAAGCCCAAGTCAACTATTCT  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCCTTACAACAAACCCCAAAACATAAAGCCCAAGTCAACTATTCT  650

seq1  TCCATTGTTTCTGTTGGTTATTTGGTTGCAGTGATAATGATTAATACACA  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGTTTCTGTTGGTTATTTGGTTGCAGTGATAATGATTAATACACA  700

seq1  TGCCAACAGTACACATGATGTAGAAAACAATTATGTTAATTGCTAAGAGG  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACAGTACACATGATGTAGAAAACAATTATGTTAATTGCTAAGAGG  750

seq1  TAGTGCCTTTGGGAGTTTGTGGTCGTCACTGAAATGACTAAAATGGATCT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCCTTTGGGAGTTTGTGGTCGTCACTGAAATGACTAAAATGGATCT  800

seq1  CACGAGAAGTTTGCCACTGCTCTATCCTAACCCTTCCAGGAGGAATACAG  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAGAAGTTTGCCACTGCTCTATCCTAACCCTTCCAGGAGGAATACAG  850

seq1  ATGCTAGCGCAATGGTGTCTGCATGGAGGTGAGCTCTCTAGACAGGGTGG  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAGCGCAATGGTGTCTGCATGGAGGTGAGCTCTCTAGACAGGGTGG  900

seq1  GCTTGCAGACTTCAAGGATGCTACGCTGCTCAAAGAAGTGGCAGGGGGTG  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCAGACTTCAAGGATGCTACGCTGCTCAAAGAAGTGGCAGGGGGTG  950

seq1  GGGGGCAGTCCATCTTTCTGGATTAGAGCCCAGTTACCTCGATTCTAAGA  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCAGTCCATCTTTCTGGATTAGAGCCCAGTTACCTCGATTCTAAGA  1000

seq1  AAGAAAACATGGCGGCTGATGGATGGGATACAACCTCCTCAAGCCATAAC  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACATGGCGGCTGATGGATGGGATACAACCTCCTCAAGCCATAAC  1050

seq1  CTGAGGGTTTTCTTGACAGCTGGAAAGCATCAATCTTTCCATGTCCTCCA  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGTTTTCTTGACAGCTGGAAAGCATCAATCTTTCCATGTCCTCCA  1100

seq1  GAAACGCCTGCAGATACTTTCTGCAAAATTGCTGGAAGGTGAATTC  1130
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACGCCTGCAGATACTTTCTGCAAAATTGCTGGAAGGTGAATTC  1146


seq1: chr5_151790868_151791932
seq2: B6Ng01-276M20.g_68_1129

seq1  GAATTCAGTTGTGCACCTCTTGCTTGCTGGAGTTGTTGAAGTTATGTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTGTGCACCTCTTGCTTGCTGGAGTTGTTGAAGTTATGTCTG  50

seq1  CACTTTTTTGGGTCCGCCCAGATAGCTAACAGTTGCTCTGTTCTTTGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTTTGGGTCCGCCCAGATAGCTAACAGTTGCTCTGTTCTTTGTAG  100

seq1  GTGGACACTACTCTCTCTCAGTTTACTGACCCGAATGTCTATCTGTGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACACTACTCTCTCTCAGTTTACTGACCCGAATGTCTATCTGTGGGA  150

seq1  TGTGCATCACAGTAAGAGGCTTATTAAAGTAGACGGGGTTGTAGCCAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATCACAGTAAGAGGCTTATTAAAGTAGACGGGGTTGTAGCCAAGA  200

seq1  AGAGAAAACCTTACTGTGTTGATTTCTCTGCCATCCGGCCTCAGATAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAACCTTACTGTGTTGATTTCTCTGCCATCCGGCCTCAGATAACC  250

seq1  TTACTTCGAGAAATGCGGGTCACCCACTTTCGCTTCTCCCTGGACTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTCGAGAAATGCGGGTCACCCACTTTCGCTTCTCCCTGGACTGGGC  300

seq1  CCTGATCTTGCCTCTGGGTAACCAGACCCAAGTGAACCACACGGTTCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATCTTGCCTCTGGGTAACCAGACCCAAGTGAACCACACGGTTCTGC  350

seq1  ACTTCTACCGCTGCATGATCAGCGAGCTGGTGCACGCCAACATCACTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTACCGCTGCATGATCAGCGAGCTGGTGCACGCCAACATCACTCCA  400

seq1  GTGGTGGCCCTGTGGCAGCCAGCAGCCCCGCACCAAGGCCTGCCACATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGCCCTGTGGCAGCCAGCAGCCCCGCACCAAGGCCTGCCACATGC  450

seq1  CCTTGCAAAACATGGGGCCTGGGAGAACCCGCACACTGCTCTGGCGTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCAAAACATGGGGCCTGGGAGAACCCGCACACTGCTCTGGCGTTTG  500

seq1  CAGACTACGCAAACCTGTGTTTTAAAGAGTTGGGTCACTGGGTCAATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTACGCAAACCTGTGTTTTAAAGAGTTGGGTCACTGGGTCAATCTC  550

seq1  TGGATCACCATGAACGAGCCAAACACACGGAACATGACCTATCGTGCCGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCACCATGAACGAGCCAAACACACGGAACATGACCTATCGTGCCGG  600

seq1  GCACCACCTCCTGAGAGCCCATGCCTTGGCTTGGCATCTGTACGATGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCACCTCCTGAGAGCCCATGCCTTGGCTTGGCATCTGTACGATGACA  650

seq1  AGTTTAGGGCGGCTCAGAAAGGCAAAATATCCATCGCCTTGCAGGCTGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGGGCGGCTCAGAAAGGCAAAATATCCATCGCCTTGCAGGCTGAC  700

seq1  TGGATAGAACCGGCCTGCCCTTTCTCTCAAAATGACAAAGAAGTGGCCGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAGAACCGGCCTGCCCTTTCTCTCAAAATGACAAAGAAGTGGCCGA  750

seq1  GAGAGTTTTGGAATTTGATATAGGCTGGCTGGCAGAGCCTATTTTTGGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTTTGGAATTTGATATAGGCTGGCTGGCAGAGCCTATTTTTGGTT  800

seq1  CCGGAGATTATCCACGTGTGATGAGGGACTGGCTGAACCAAAAAAACAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGAGATTATCCACGTGTGATGAGGGACTGGCTGAACCAAAAAAACAAT  850

seq1  TTTCTTTTGCCCTATTTCACCGAAGATG-AAAAAAAGCTAGT-CCGGGGT  898
      |||||||||||||||||||||||||||| ||||||||||||| |||||||
seq2  TTTCTTTTGCCCTATTTCACCGAAGATGAAAAAAAAGCTAGTCCCGGGGT  900

seq1  TCCTTTGACTTCCTGGCGGTGAGTCATTACA-CCACCATTCTGGTAGACT  947
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCCTTTGACTTCCTGGCGGTGAGTCATTACACCCACCATTCTGGTAGACT  950

seq1  GGGAAAAGGAGGATCCGATGAAATACAACGATTACTTGGAGGTACAGGAG  997
      |||||||||||||||||||| ||||||||||||||||||| ||||| |||
seq2  GGGAAAAGGAGGATCCGATG-AATACAACGATTACTTGGA-GTACA-GAG  997

seq1  ATGACTGACATCACATGGCTCAACTCTCCCAGTCAGGTGGCAGTGGTGCC  1047
      ||||||||||||||||||||||||||||||||||||   ||||||||| |
seq2  ATGACTGACATCACATGGCTCAACTCTCCCAGTCAG--TGCAGTGGTG-C  1044

seq1  TTGGGGGCTGCGCAAAGT  1065
       ||||| |||||||||||
seq2  GTGGGGCCTGCGCAAAGT  1062


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