BAC Information

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BAC

Clone NameB6Ng01-278C22
Chromosome5 (Build37)
Map Location 62,259,956 - 62,261,107
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666597, EG666610, LOC100041524, G6pd2
Downstream geneLOC100041543, Centd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278C22.bB6Ng01-278C22.g
ACCGA078495GA078496
length1,148210
definitionB6Ng01-278C22.b B6Ng01-278C22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttttactctttataccttgaacatttttcttaacactaaaag
gaagtaaaacctattaattcatgccttatctcaccaaatatattttaatg
attcttttcttttcagtaatcaatattacacacacacaaacacacacaga
gacacatatatttatatgcaattccataaatatactcaattctatattta
ttcattataaatcatatgaacaaattatattaatacccaatacagttgga
agaaatgttaaatctatacccaattcatatgtgtaacctaagaatgataa
attttcctccaatagatttagaatttcccccttatggatagcagaccttg
gtctaagtgagaagtcctatttttaaatcatttttattttaatatttgat
aattttaacactcataataaagattttggcaagcagatattttaatatca
aacattattcagcttattgttttgtattgtcttcaccagtatccttgcca
aattcttgtccattcagaaactgtaaatgttaccctatttttcctttaaa
atagttcatcctggagatgtagatggctaactgaataaacatgtttgctt
gggaagcctaaaacgtcattcgaactcaaaaatccttataaggattggac
atattagacaaatctctgtgattctaatttgctccaaggggatgatagga
agttgtgacataggacctactagatgctcatggataactagcataataca
caagaaagcaaagacactctgtctcaagaaagacaaaggcaacactgacc
taggttgtcattagacctccccactaacactgtagcacatccaggtccat
aaagacacagctacactggcatactcatgcaaacagatgcacactcattc
tctctctgtttctcactttcttcatctccagtcattcagacacacataca
tagtctctctcacaatacattctctatctctatctctgtctctgtctgtc
tctctgtctctgactctgtctcctctctctctaacacacaacagatcagt
caggttgggatgagcgtgtataataaatgatgacttatttttcttatagt
taaaaatagagaaatcaagaaattacacagagaggtattatggtcctt

caaccccataggaaaaacattatctgctaaccagacccctcatagctccc
agtgactaaaccaccaactaaagagcatacatagactggtccatggctcc
cattacatatatagcagaggactgccttatcggacctcagtgggagggta
tgtgcttgtttctgtggaggtttgatgtcccagagaggggggtaaggtgg
ggatgggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_62259956_62261107
seq2: B6Ng01-278C22.b_44_1191 (reverse)

seq1  AAGGAACCATAATACCTCTCTGTGT-ATATCTTGGTTTCTCTAATTTTTT  49
      |||| |||||||||||||||||||| || ||||| ||||||||   ||||
seq2  AAGG-ACCATAATACCTCTCTGTGTAATTTCTTGATTTCTCTA---TTTT  46

seq1  TAACTATAAG-AAAATAAGTCATTCAATTTATTATACACGCTCAT-CCAA  97
      |||||||||| ||||||||||||   ||||||||||||||||||| ||||
seq2  TAACTATAAGAAAAATAAGTCAT--CATTTATTATACACGCTCATCCCAA  94

seq1  CTTGACCTGATCTG-TGTGTGTTAGAGAGAAAGAGAGACAGAGTCAGAGA  146
      | ||| |||||||| ||||||||||||||| || ||||||||||||||||
seq2  CCTGA-CTGATCTGTTGTGTGTTAGAGAGAGAG-GAGACAGAGTCAGAGA  142

seq1  CAGAGAGACAGACAGAGACAGAGATAGAGATAGAGAAATGTA-TGTGAGA  195
      ||||||||||||||||||||||||||||||||||| |||||| |||||||
seq2  CAGAGAGACAGACAGAGACAGAGATAGAGATAGAG-AATGTATTGTGAGA  191

seq1  GAGACTATGTATGTGTGTCTGAATGACTGGAGATGAAGAAAGTGAGAAAC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTATGTATGTGTGTCTGAATGACTGGAGATGAAGAAAGTGAGAAAC  241

seq1  AGAGAGAGAATGAGTGTGCATCTGTTTGCATGAGTATGCCAGTGTAGCTG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAATGAGTGTGCATCTGTTTGCATGAGTATGCCAGTGTAGCTG  291

seq1  TGTCTTTATGGACCTGGATGTGCTACAGTGTTAGTGGGGAGGTCTAATGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTATGGACCTGGATGTGCTACAGTGTTAGTGGGGAGGTCTAATGA  341

seq1  CAACCTAGGTCAGTGTTGCCTTTGTCTTTCTTGAGACAGAGTGTCTTTGC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTAGGTCAGTGTTGCCTTTGTCTTTCTTGAGACAGAGTGTCTTTGC  391

seq1  TTTCTTGTGTATTATGCTAGTTATCCATGAGCATCTAGTAGGTCCTATGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGTGTATTATGCTAGTTATCCATGAGCATCTAGTAGGTCCTATGT  441

seq1  CACAACTTCCTATCATCCCCTTGGAGCAAATTAGAATCACAGAGATTTGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTTCCTATCATCCCCTTGGAGCAAATTAGAATCACAGAGATTTGT  491

seq1  CTAATATGTCCAATCCTTATAAGGATTTTTGAGTTCGAATGACGTTTTAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATGTCCAATCCTTATAAGGATTTTTGAGTTCGAATGACGTTTTAG  541

seq1  GCTTCCCAAGCAAACATGTTTATTCAGTTAGCCATCTACATCTCCAGGAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCAAGCAAACATGTTTATTCAGTTAGCCATCTACATCTCCAGGAT  591

seq1  GAACTATTTTAAAGGAAAAATAGGGTAACATTTACAGTTTCTGAATGGAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTATTTTAAAGGAAAAATAGGGTAACATTTACAGTTTCTGAATGGAC  641

seq1  AAGAATTTGGCAAGGATACTGGTGAAGACAATACAAAACAATAAGCTGAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTGGCAAGGATACTGGTGAAGACAATACAAAACAATAAGCTGAA  691

seq1  TAATGTTTGATATTAAAATATCTGCTTGCCAAAATCTTTATTATGAGTGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTTGATATTAAAATATCTGCTTGCCAAAATCTTTATTATGAGTGT  741

seq1  TAAAATTATCAAATATTAAAATAAAAATGATTTAAAAATAGGACTTCTCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTATCAAATATTAAAATAAAAATGATTTAAAAATAGGACTTCTCA  791

seq1  CTTAGACCAAGGTCTGCTATCCATAAGGGGGAAATTCTAAATCTATTGGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGACCAAGGTCTGCTATCCATAAGGGGGAAATTCTAAATCTATTGGA  841

seq1  GGAAAATTTATCATTCTTAGGTTACACATATGAATTGGGTATAGATTTAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATTTATCATTCTTAGGTTACACATATGAATTGGGTATAGATTTAA  891

seq1  CATTTCTTCCAACTGTATTGGGTATTAATATAATTTGTTCATATGATTTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTTCCAACTGTATTGGGTATTAATATAATTTGTTCATATGATTTA  941

seq1  TAATGAATAAATATAGAATTGAGTATATTTATGGAATTGCATATAAATAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAATAAATATAGAATTGAGTATATTTATGGAATTGCATATAAATAT  991

seq1  ATGTGTCTCTGTGTGTGTTTGTGTGTGTGTAATATTGATTACTGAAAAGA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCTCTGTGTGTGTTTGTGTGTGTGTAATATTGATTACTGAAAAGA  1041

seq1  AAAGAATCATTAAAATATATTTGGTGAGATAAGGCATGAATTAATAGGTT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATCATTAAAATATATTTGGTGAGATAAGGCATGAATTAATAGGTT  1091

seq1  TTACTTCCTTTTAGTGTTAAGAAAAATGTTCAAGGTATAAAGAGTAAAAG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTCCTTTTAGTGTTAAGAAAAATGTTCAAGGTATAAAGAGTAAAAG  1141

seq1  TGAATTC  1152
      |||||||
seq2  TGAATTC  1148


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