BAC Information

Click to search

BAC

Clone NameB6Ng01-280F14
Chromosome5 (Build37)
Map Location 127,295,407 - 127,295,884
singlet/doubletsinglet
Overlap genenone
Upstream geneEG231736, LOC100039178, LOC665760
Downstream geneLOC100040327, Tmem132c, Slc15a4, Glt1d1, Tmem132d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280F14.g
ACCGA080099
length472
definitionB6Ng01-280F14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aacaggataaagggtcttagcagagtctgatgtctgtctctagagtgttg
tcataacttaagacaagcaatacatcagtttctgtgtctggcttatttat
gtataaaacaaataggccatccacttcctgagtgactactactgggtaaa
taatattgtgggtgttaggaaaacagaaagaaaggagagtatgcagtatg
cagaaatgagcatgcagaaaggtttcaacacagattatttttgaatttta
atgcattatatatttatatttacacctatccattgtcctagtttgatttt
gctactgtctcaataaaacactgaccaagaacaacttgacgagagagaag
aaaaagattatttggcttacaagttacagtccttcgttgagggaagccaa
ggcaggaacccaagacaggagcttgaagcatagagaggcagtagtagcgg
tggaggtgggggagaggggatg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_127295407_127295884
seq2: B6Ng01-280F14.g_68_545

seq1  GAATTCAACAGGATAAAGGGTCTTAGCAGAGTCTGATGTCTGTCTCTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGGATAAAGGGTCTTAGCAGAGTCTGATGTCTGTCTCTAGA  50

seq1  GTGTTGTCATAACTTAAGACAAGCAATACATCAGTTTCTGTGTCTGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTCATAACTTAAGACAAGCAATACATCAGTTTCTGTGTCTGGCTT  100

seq1  ATTTATGTATAAAACAAATAGGCCATCCACTTCCTGAGTGACTACTACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGTATAAAACAAATAGGCCATCCACTTCCTGAGTGACTACTACTG  150

seq1  GGTAAATAATATTGTGGGTGTTAGGAAAACAGAAAGAAAGGAGAGTATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATAATATTGTGGGTGTTAGGAAAACAGAAAGAAAGGAGAGTATGC  200

seq1  AGTATGCAGAAATGAGCATGCAGAAAGGTTTCAACACAGATTATTTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGCAGAAATGAGCATGCAGAAAGGTTTCAACACAGATTATTTTTGA  250

seq1  ATTTTAATGCATTATATATTTATATTTACACCTATCCATTGTCCTAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATGCATTATATATTTATATTTACACCTATCCATTGTCCTAGTTT  300

seq1  GATTTTGCTACTGTCTCAATAAAACACTGACCAAGAACAACTTGACGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTGCTACTGTCTCAATAAAACACTGACCAAGAACAACTTGACGAGA  350

seq1  GAGAAGAAAAAGATTATTTGGCTTACAAGTTACAGTCCTTCGTTGAGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAAAAAGATTATTTGGCTTACAAGTTACAGTCCTTCGTTGAGGGA  400

seq1  AGCCAAGGCAGGAACCCAAGACAGGAGCTTGAAGCATAGAGAGGCAGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGGCAGGAACCCAAGACAGGAGCTTGAAGCATAGAGAGGCAGTAG  450

seq1  TAGCGGTGGAGGTGGGGGAGAGGGGATG  478
      ||||||||||||||||||||||||||||
seq2  TAGCGGTGGAGGTGGGGGAGAGGGGATG  478


| Home | SequenceCutter | Blast | Download |