BAC Information

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BAC

Clone NameB6Ng01-281P14
Chromosome5 (Build37)
Map Location 49,909,932 - 49,911,064
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnip4, LOC100041668, LOC100041659
Downstream geneEG433885, LOC666223, Gpr125, EG637307
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281P14.bB6Ng01-281P14.g
ACCGA081312GA081313
length1,2011,143
definitionB6Ng01-281P14.b B6Ng01-281P14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcctattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagagcaagccattgctgtt
ctgttcaggaatctttcccctgtacccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
cctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatcttttacttccttagttagagtcacgccgagatattttatattat
ttgtgactattgagaaggtgttgtttccctaatttctttctcagcctgtt
tattcttgtgtagagaaggcattgacttgttgagttaattttattatcag
ctacttcacaaaggctgtttattcaggttaagggatctctggtgggactt
ttgaggacaccttaatataactatcaattccatctggcaagtgcaatttg
gtacctcctccttgcaaattgttgacatccccgcatgagtgactttccgc
t
gaattctatatttatatccccgatcaaatggcttgttatagtgtcagagt
gtgtagggaactgttgtgtttaaaaacggactttctacttactcggctct
ctaatactgcatatgcatttgcatacagatctgccatagaaaagaggctt
ggcaagcagagagacagacatggccactggagtaaaggtctaaacgttat
ctcttttcagccttccttcctgacacaacctgattctccctgtgaatgct
gatatgagagagaaaaggaagcaaagaaatagatgtgtgtgaactcattg
agatcccagtggtttgttattcccattcctttctgtggctactgctacaa
tgggaggtactttcactgggtgggcttaataacaaagataacagtaataa
tagcactcatggtagtacagatgcatagaagaggacatcttaagtaacaa
ccaaagtcatgtttcagagtgaatacttaaataattttgcactgtctcat
taattctggtaaaggactagaagggatagcaactgctccctgaaagtcca
ctggactactgaccctggaagtcatccatctggaagatattgaggatgag
ggagaagcacagcaaccatattgctacaaatacaacaaatacttccttca
agccttctccacaagagatctatactcctctagcaagggggccaccgatg
ctgagaaaagacagacctcatgccatatttctcagcttggggacatggtc
cttcaaataaagaggacagaaaaccaaagaatgtcagttcctaaagaggg
tttaacaagctactaatataaactgaggttcaagttctttcacaggtcta
tcatggtgcaacaggatttaaattcaataaatgtcttttaggcatttact
agtttgtgaagcatcatgtaaatactaactagtagggaaaaaaacagtaa
cttgttacagggaaatatattaatgaggacctacatttaatggctacaaa
taataaaagcaaattgaagctgctcttagtttggaaatggggacaagaag
cagtggaaataagcacaaggaggacctcttgcatgttgaacaatgggttc
tggataatttgtaggaacacaccaatcacctagcagcgatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_49909932_49911064
seq2: B6Ng01-281P14.g_70_1212

seq1  GAATTCTATATTTATATCCCCGATCAAATGGCTTGTTATAGTGTCAGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATATTTATATCCCCGATCAAATGGCTTGTTATAGTGTCAGAGT  50

seq1  GTGTAGGGAACTGTTGTGTTTAAAAACGGACTTTCTACTTACTCGGCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGGGAACTGTTGTGTTTAAAAACGGACTTTCTACTTACTCGGCTCT  100

seq1  CTAATACTGCATATGCATTTGCATACAGATCTGCCATAGAAAAGAGGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATACTGCATATGCATTTGCATACAGATCTGCCATAGAAAAGAGGCTT  150

seq1  GGCAAGCAGAGAGACAGACATGGCCACTGGAGTAAAGGTCTAAACGTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGCAGAGAGACAGACATGGCCACTGGAGTAAAGGTCTAAACGTTAT  200

seq1  CTCTTTTCAGCCTTCCTTCCTGACACAACCTGATTCTCCCTGTGAATGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTCAGCCTTCCTTCCTGACACAACCTGATTCTCCCTGTGAATGCT  250

seq1  GATATGAGAGAGAAAAGGAAGCAAAGAAATAGATGTGTGTGAACTCATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGAGAGAGAAAAGGAAGCAAAGAAATAGATGTGTGTGAACTCATTG  300

seq1  AGATCCCAGTGGTTTGTTATTCCCATTCCTTTCTGTGGCTACTGCTACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCCAGTGGTTTGTTATTCCCATTCCTTTCTGTGGCTACTGCTACAA  350

seq1  TGGGAGGTACTTTCACTGGGTGGGCTTAATAACAAAGATAACAGTAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGTACTTTCACTGGGTGGGCTTAATAACAAAGATAACAGTAATAA  400

seq1  TAGCACTCATGGTAGTACAGATGCATAGAAGAGGACATCTTAAGTAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACTCATGGTAGTACAGATGCATAGAAGAGGACATCTTAAGTAACAA  450

seq1  CCAAAGTCATGTTTCAGAGTGAATACTTAAATAATTTTGCACTGTCTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTCATGTTTCAGAGTGAATACTTAAATAATTTTGCACTGTCTCAT  500

seq1  TAATTCTGGTAAAGGACTAGAAGGGATAGCAACTGCTCCCTGAAAGTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTGGTAAAGGACTAGAAGGGATAGCAACTGCTCCCTGAAAGTCCA  550

seq1  CTGGACTACTGACCCTGGAAGTCATCCATCTGGAAGATATTGAGGATGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACTACTGACCCTGGAAGTCATCCATCTGGAAGATATTGAGGATGAG  600

seq1  GGAGAAGCACAGCAACCATATTGCTACAAATACAACAAATACTTCCTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGCACAGCAACCATATTGCTACAAATACAACAAATACTTCCTTCA  650

seq1  AGCCTTCTCCACAAGAGATCTATACTCCTCTAGCAAGGGGGCCACCGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCTCCACAAGAGATCTATACTCCTCTAGCAAGGGGGCCACCGATG  700

seq1  CTGAGAAAAGACAGACCTCATGCCATATTTCTCAGCTTGGGGACATGGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAAAGACAGACCTCATGCCATATTTCTCAGCTTGGGGACATGGTC  750

seq1  CTTCAAATAAAGAGGACAGAAAACCAAAGAATGTCAGTTCCTAAAGAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAATAAAGAGGACAGAAAACCAAAGAATGTCAGTTCCTAAAGAGGG  800

seq1  TTTAACAAGCTACTAATATAAACTGAGGTTCAAGTTCTTTCACAGGTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAAGCTACTAATATAAACTGAGGTTCAAGTTCTTTCACAGGTCTA  850

seq1  TCATGGTGCAACAGGATTTAAATTCAATAAATGTCTTTTAGGCATTTACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTGCAACAGGATTTAAATTCAATAAATGTCTTTTAGGCATTTACT  900

seq1  AGTTTGTGAAGCATCATGTAAATACTAACTAGTAGGGAAAAAAACAGTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTGAAGCATCATGTAAATACTAACTAGTAGGGAAAAAAACAGTAA  950

seq1  CTTG-TACA-GGAAATATATTAATGAGGACCTACATTTAATGGCTACAAA  998
      |||| |||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTACAGGGAAATATATTAATGAGGACCTACATTTAATGGCTACAAA  1000

seq1  TAATAAAAGCAAAATGAAAGGCTGGTTCTTAGTTGGGAAATGGGGACA--  1046
      ||||||||||||| ||||  ||| | |||||||| |||||||||||||  
seq2  TAATAAAAGCAAATTGAA--GCT-GCTCTTAGTTTGGAAATGGGGACAAG  1047

seq1  GAGCAGTGGAA--TAGCACAAGGAGGA-CTC-TGCATG-TGA--CATGGG  1089
       ||||||||||   ||||||||||||| ||| |||||| |||   |||||
seq2  AAGCAGTGGAAATAAGCACAAGGAGGACCTCTTGCATGTTGAACAATGGG  1097

seq1  -TCTGGATAAATTTGTAG--ACA-ACCAATCACCAAGCAGCAGATGTG  1133
       ||||||| |||||||||  ||| |||||||||| |||||| ||||||
seq2  TTCTGGAT-AATTTGTAGGAACACACCAATCACCTAGCAGC-GATGTG  1143