BAC Information

Click to search

BAC

Clone NameB6Ng01-283H18
Chromosome5 (Build37)
Map Location 95,110,191 - 95,110,951
singlet/doubletsinglet
Overlap geneLOC621203
Upstream geneLOC666075, LOC666077, LOC666081, EG665802, LOC100040408, LOC100040981, EG622719, LOC100041003, BC061212, EG622744, LOC100041032, LOC100041042, LOC624421, AA792892, LOC665521, LOC665551, LOC100041102, LOC665560, LOC100041115, LOC624507
Downstream geneLOC100041153, LOC665499, LOC624698, LOC100041179, LOC624655, LOC100041166, LOC665469, LOC622894, EG666121, LOC666125, EG666133, LOC100041296, LOC100041253, LOC100041264, EG624049, EG666159, LOC666164, EG666169, D5Ertd577e, LOC100041354, LOC100040503, LOC666187, EG622731, LOC100041380
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283H18.bB6Ng01-283H18.g
ACCGA082434GA082435
length9891,194
definitionB6Ng01-283H18.b B6Ng01-283H18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatattgatctgcaacacaagacttttgtttgtatttttttttt
gcactggtttttttgtatgtttcttgtttgttttttgctattcagttttt
gatttgtttttttttcttttaatttttattactaaatttaatttctcttc
aattcatttttaccctccatttattatccccctcctgatctgccacttga
ttgctcctcatcccattcctcctacttgtcccttgcccccctcccttttt
ttttttttggtttttgagacagggtttctctgtgtagccctaactgtcct
ggaactcactctgtagaccaggctggtcttgaactcagaaatctccctgc
ctctgcctcccaagtgatgggattaaaggcatgtgccattactgcctggc
cctccacccatttttttattgatcacttcatttatttacatttcaagtgt
tatctcatttcctggtttcagctctgcaagctccctctcatgatccctcc
tctttaccactaagagggcactcccccacccacccacacactcctgcctc
actcctctagcttatccacttcactaggacaacaagcctccacaggacaa
aggacctcctctcttattgaagccatataaggaatcatttgctacatatg
tatcaggaaccatagacccactcatgtatgttttctggttgctgacttag
ttcctgggaaatctgaggggtccagttagttgataattttttcctatggg
attgtaatccccttcagcttcttcagtccttccctttctcttccattgtg
gtccccaagctcaatgcaattgttgggttgtgagtgtctacaattgtatt
agacagttataggcacaggctctcagaggacagccataccttggcatcag
caacagtgttggggtttggtgtctgctgattttatagattccaagattcc
agtctctggatggccttttcttcagtctctgctcaattt
gaattcccattaaattccaacacaattcttacagaccttgaaggctcaat
tctctattccatatggaaaactaaaaataaaaaatacaggatagctaaaa
caatcccatccaataaaagaacttctaaaaagaatcaccgtccctgatct
catgttgtactacataaccatagtaaaatgaaaactgcctagtattgact
gaaaaacagaaaagttgatcaacggaatacccctgaatgtgcacaaataa
accaatacaactatcaaccatcaacacttcatttttaacagagaaggcaa
aagagacattggaaaaaagaaagcatcttcatcaatgggtggctgtctaa
ctggatatctgcatgtagaagaaagctagttgctctatatttttcatcct
ccagtactctcaagtccaactgatcaaagacctcaaagtaaaaatggatg
cacaacacctaatacaagagaaagtaggggattagtctggaacacattgc
cccaggagataacttcctgaagagaaacccatagctcagaccatgagatc
aacaattaataatgggacttggtgaaactgaaaagcttctatacagcaaa
agagaacatcagtatgccaaaacgacagcctaaagattggaagaagatcc
tcactaacactacatctgacagaaggatgatatccaaaaactataaatat
aacaaaatattagttatccacaagccaaatcctccaatttaaaaatcaag
cactaaattacacagaatatttcaacagaggaatctctacaggctgagaa
gcacctaaataaatgttcaacattccaaatcatctaagaaatgcaaattg
caatgactcttgagattccatcttacacacttcagaatggctaagatcac
aacctcaagtgacagctcatgttgggggaggttatacaacaaggggaaca
ctcctcaatttgttctgagagtgaaaacttggacaccacttttgaaatca
atctgcagtatattcagaaatttgagaatgcttctagttccagctttacc
tctcctagagaggactttttaataccaaaagacacttgctcactatgtca
tagcagcgtccctcaactgagaccgtgcctcctaaaaaccaggcagaact
gatgctaccatatattactctcacagtctccgtgtgaaggttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_95110191_95110951
seq2: B6Ng01-283H18.b_48_796

seq1  GAATTCAATATTGATCTGCAACACAAGACTTTTGTTTGTATTTTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATTGATCTGCAACACAAGACTTTTGTTTGTATTTTTTTTTT  50

seq1  GCACTGGTTTTTTTTGTATGTTTCTTGTTTGTTTTTTGCTATTCAGTTTT  100
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGG-TTTTTTTGTATGTTTCTTGTTTGTTTTTTGCTATTCAGTTTT  99

seq1  TGATTTGTTTTTTTTTTTCTTTTTTTTAAATTTTTATTACTAAATTTAAT  150
      |||||||  ||||||||||||||     ||||||||||||||||||||||
seq2  TGATTTG--TTTTTTTTTCTTTT-----AATTTTTATTACTAAATTTAAT  142

seq1  TTCTCTTCAATTCATTTTTACCCTCCATTCATTATCCCCCTCCTGATCTG  200
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTCTCTTCAATTCATTTTTACCCTCCATTTATTATCCCCCTCCTGATCTG  192

seq1  CCACTTGATTGTTCCTCATCCCATTCCTCCTACTTGTCCCTTGCCCCCCT  250
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCACTTGATTGCTCCTCATCCCATTCCTCCTACTTGTCCCTTGCCCCCCT  242

seq1  CCCTTTTTTTTTTTTTTTTTGGTTTTTGAGACAGGGTTTCTCTGTGTAGC  300
      |||    |||||||||||||||||||||||||||||||||||||||||||
seq2  CCC----TTTTTTTTTTTTTGGTTTTTGAGACAGGGTTTCTCTGTGTAGC  288

seq1  CCTAACTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTTGAACTCAG  350
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCTAACTGTCCTGGAACTCACTCTGTAGACCAGGCTGGTCTTGAACTCAG  338

seq1  AAATCTCCCTGCCTCTGCCTCCCAAGTGATGGGAATAAAGGCATGTGCCA  400
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAATCTCCCTGCCTCTGCCTCCCAAGTGATGGGATTAAAGGCATGTGCCA  388

seq1  TTACTGCCTGGCCCTCCACCCATTTTTTTATTGATCACTTCATTTATTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGCCTGGCCCTCCACCCATTTTTTTATTGATCACTTCATTTATTTA  438

seq1  CATTTCAAGTGTTATCTCATTTCCTGGTTTCAGCTCTGCAAGCCCCCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CATTTCAAGTGTTATCTCATTTCCTGGTTTCAGCTCTGCAAGCTCCCTCT  488

seq1  CATGATCCCTCCTCTTTACCACTAAGAGGGCACTCCCCCACCCACCCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATCCCTCCTCTTTACCACTAAGAGGGCACTCCCCCACCCACCCACA  538

seq1  CATTCCTGCCTCACTCCTCTAGCTTATCCACTTCACTAGGACAACAGGCC  600
      || ||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CACTCCTGCCTCACTCCTCTAGCTTATCCACTTCACTAGGACAACAAGCC  588

seq1  TCCACAGGACAAAGGACCTCCTCTCTTATTGAAGCCATATAAGGAATCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGGACAAAGGACCTCCTCTCTTATTGAAGCCATATAAGGAATCAT  638

seq1  TTGCTACATATGTATCAGGAACTATAGACACACTCATGTATGTTTTCTGG  700
      |||||||||||||||||||||| |||||| ||||||||||||||||||||
seq2  TTGCTACATATGTATCAGGAACCATAGACCCACTCATGTATGTTTTCTGG  688

seq1  TTGCTGACTTAGTTCCTGGGAAATCTGAGGGGTCCAGTTAGTTGATAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGACTTAGTTCCTGGGAAATCTGAGGGGTCCAGTTAGTTGATAATT  738

seq1  TTTTCCTATGG  761
      |||||||||||
seq2  TTTTCCTATGG  749