BAC Information

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BAC

Clone NameB6Ng01-283N14
Chromosome5 (Build37)
Map Location 13,698,507 - 13,699,621
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433845, LOC625989, LOC670717, Sema3a
Downstream geneLOC208055, LOC626053, Speer3, EG626067, LOC668085, LOC384149, LOC384148, Sema3e, LOC100042957, Pclo
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283N14.bB6Ng01-283N14.g
ACCGA082703GA082704
length1,1101,155
definitionB6Ng01-283N14.b B6Ng01-283N14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctctgagccccatcttttaagggggctatttgatt
ttctggagtccaccctcttgagttctttatatatattggatattagtccc
ctatctgatttaagataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattggtggtttcttttgccttgcagaagctttgcagtttca
tgaggtcccatttgtcaatcctcgatcttaaagcacaagccattgctgtt
ctattcaggaattttttctctgtgcccatatctttgagacttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttaggtttgaccttagtacaaggagagaggagttgtcagtataat
taagttaggacagagcagctgcattttctccgttttgctaacaccatggc
ttccctggttccatggttgcttgttttattgagttctactctcctattct
ttcaaatattctcattttgtttagcttattgtgggattttatattgagtt
tattttcttatgttatttgttattcaaacaaaacttccctttgtttttgt
tttttgctttctgatttttgtttttgtttgcttacttgctcgcttggttg
ttgtaacaattatattttgggggcataattatgttcttaccttaaatttc
taggtgaactcttagagttcacataggaatatcacttggaagaatgaaga
aggcaatagtagatattatttaattgcattgccattatagagtagatatc
acctgccccacaatttacctggagaatggattgaagatgaagcattagag
taccaggttttgtgctcacatctctgcattaataagtgggactaattcct
ggttatgattagttttcaccagctgggagaagaaattttaaattcgtata
ggcaatgataaatggatccactaacatccactcaagccatttacgtctga
tgtcaacccatttggtaactacatgtcagattctggtttaacctccattt
atggttataagagtaaaagatgaaggtttttctgttccagtcatcagttc
tgctttttca

gaattctacctttatttcatagtgatctgataagatacaagggatcttgt
tttatcacttgaggcttggtttgagatcgtctacgtgatcagttttggag
aatgctccctgaagtgtttttgggctggctaaatggttctatagatattt
gttaaatccattgggtgacccagccacttcagttactcaataggttctca
aggtatggagtagggattgaaaagaagacaattagacaacgttatagcat
gactccagtcagtgctgaggctgaatttttttccctccattcagcattta
tagcattctaaatactggcagagaataggttcagttcttggatcaaatgc
aaagtattcaaacaaggtaataaacaaagatatcaaacaaagcagtaaac
aaagccccctagtctctgtttctagaagcttatgaagataccaaggtata
agaagtgccacaccttttaggctgtatttaccttgagctttacattagcc
caaatgtgaatatttttatctgagcctacttccttgagcccaatgacaag
tgctacacaaatttctagaagcagccgcaaaggtatccacatccccccag
tttttatttcataaacaagactgtctgtcttaggttgttttgataagaat
gcctttcttacctgtcttggaatatgcattttcaagagcaatgcatttcc
gtcttaggatgataaaactctctacagaatctttgactggcagcctgtta
aattaatgagtctgtctgggaatccaatgctcatttaaagccttgtagtt
tggctgccaatatgtcggtgttgataaaagcaagttttattacaatgtac
agaaataaaagtattccctggacaagaaagggcttatatgatcaagctat
ataagctgtttttgaattattgactgagatagaaatactgaccttaagcc
atgaatatatctgcagcatcaaaaactctgaaaagcagcattctttaatt
cataatgtcagtaagcaagttaaacgttctgagaagttttaaaattatgt
ctatactgcaaaggtttgatgatttctcacagtaactatcatgtaaccta
gaagtgaccaattcattgggtattttatgaaaccactcagagattcacct
gtcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_13698507_13699621
seq2: B6Ng01-283N14.b_44_1153

seq1  GAATTCTTTGTTCAGCTCTGAGCCCCATCTTTTAAGGGGGCTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGCTCTGAGCCCCATCTTTTAAGGGGGCTATTTGATT  50

seq1  TTCTGGAGTCCACCCTCTTGAGTTCTTTATATATATTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGTCCACCCTCTTGAGTTCTTTATATATATTGGATATTAGTCCC  100

seq1  CTATCTGATTTAAGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAAGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT  150

seq1  TTTTGTCTTATTGGTGGTTTCTTTTGCCTTGCAGAAGCTTTGCAGTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTATTGGTGGTTTCTTTTGCCTTGCAGAAGCTTTGCAGTTTCA  200

seq1  TGAGGTCCCATTTGTCAATCCTCGATCTTAAAGCACAAGCCATTGCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCCCATTTGTCAATCCTCGATCTTAAAGCACAAGCCATTGCTGTT  250

seq1  CTATTCAGGAATTTTTTCTCTGTGCCCATATCTTTGAGACTTTTCCCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAGGAATTTTTTCTCTGTGCCCATATCTTTGAGACTTTTCCCCAC  300

seq1  TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGA  350

seq1  TCCACTTAGGTTTGACCTTAGTACAAGGAGAGAGGAGTTGTCAGTATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTAGGTTTGACCTTAGTACAAGGAGAGAGGAGTTGTCAGTATAAT  400

seq1  TAAGTTAGGACAGAGCAGCTGCATTTTCTCCGTTTTGCTAACACCATGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTAGGACAGAGCAGCTGCATTTTCTCCGTTTTGCTAACACCATGGC  450

seq1  TTCCCTGGTTCCATGGTTGCTTGTTTTATTGAGTTCTACTCTCCTATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGGTTCCATGGTTGCTTGTTTTATTGAGTTCTACTCTCCTATTCT  500

seq1  TTCAAATATTCTCATTTTGTTTAGCTTATTGTGGGATTTTATATTGAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATATTCTCATTTTGTTTAGCTTATTGTGGGATTTTATATTGAGTT  550

seq1  TATTTTCTTATGTTATTTGTTATTCAAACAAAACTTCCCTTTGTTTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTTATGTTATTTGTTATTCAAACAAAACTTCCCTTTGTTTTTGT  600

seq1  TTTTTGCTTTCTGATTTTTGTTTTTGTTTGCTTACTTGCTCGCTTGGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGCTTTCTGATTTTTGTTTTTGTTTGCTTACTTGCTCGCTTGGTTG  650

seq1  TTGTAACAATTATATTTTGGGGGCATAATTATGTTCTTACCTTAAATTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAACAATTATATTTTGGGGGCATAATTATGTTCTTACCTTAAATTTC  700

seq1  TAGGTGAACTCTTAGAGTTCACATAGGAATATCACTTGGAAGAATGAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGAACTCTTAGAGTTCACATAGGAATATCACTTGGAAGAATGAAGA  750

seq1  AGGCAATAGTAGATATTATTTAATTGCATTGCCATTATAGAGTAGATATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATAGTAGATATTATTTAATTGCATTGCCATTATAGAGTAGATATC  800

seq1  ACCTGCCCCACAATTTACCTGGAGAATGGATTGAAGATGAAGCATTAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCCCACAATTTACCTGGAGAATGGATTGAAGATGAAGCATTAGAG  850

seq1  TACCAGGTTTTGTGCTCACATCTCTGCATTAATAAGTGGGACTAATTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGGTTTTGTGCTCACATCTCTGCATTAATAAGTGGGACTAATTCCT  900

seq1  GGTTATGATTAGTTTTCACCAGCTGGGAGAAGAAATTTTTAATTCGTATA  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGTTATGATTAGTTTTCACCAGCTGGGAGAAGAAATTTTAAATTCGTATA  950

seq1  GGCAATGATAAATGGATCCACTAACATCCACTCAAAGCCATTTACGTCTG  1000
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGCAATGATAAATGGATCCACTAACATCCACTC-AAGCCATTTACGTCTG  999

seq1  ATGTTCAACCCATTTGGTAACTACATGTTCAAGATTCT-GTTTAAC--TC  1047
      ||| ||||||||||||||||||||||||   ||||||| |||||||   |
seq2  ATG-TCAACCCATTTGGTAACTACATGT--CAGATTCTGGTTTAACCTCC  1046

seq1  ATTTAT-GTTATAAGAAGTAAAAGAATGAATGTTTTTTTCTGTCCAGTCC  1096
      |||||| |||||||| |||||||| ||||| |||||| | | ||||||| 
seq2  ATTTATGGTTATAAG-AGTAAAAG-ATGAAGGTTTTTCTGT-TCCAGTCA  1093

seq1  TTCCAGTTCTGCTTTTTCA  1115
      |  ||||||||||||||||
seq2  T--CAGTTCTGCTTTTTCA  1110


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