BAC Information

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BAC

Clone NameB6Ng01-284A14
Chromosome5 (Build37)
Map Location 127,179,266 - 127,180,348
singlet/doubletsinglet
Overlap genenone
Upstream geneTmem132b, EG231736, LOC100039178, LOC665760
Downstream geneLOC100040327, Tmem132c, Slc15a4, Glt1d1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284A14.bB6Ng01-284A14.g
ACCGA082840GA082841
length1,1671,078
definitionB6Ng01-284A14.b B6Ng01-284A14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgccaatttctgagtatatctatcccaattatacattctggaac
tggggaaatcaccacaggatgtgtccggggacctactggacctactgtga
gtcggacatcagtcaaaactccattaatcacctgccctccataagcccct
actttaactggagggccacaatgtttcttgggatcccctgggatcagtgt
caactcagaaccagtatccagcagaccccgaaaagtctgattatttcctt
ttccccagtgtacagttacccttgtaaaaggccgtaggtccctctgggga
agaactggagaaagggtaacagcaaaacctttgagtgtcttatcaagatc
cttcctcagcggaacctggccaccccttcattcaaggggttccggatctg
caaactgtctcaagtctggaaattgattcactggccgagattgctgttta
ccacgatctaatgtagcctttctttcatttgtttgagaatttttctgctt
atacagatcaaacaaatatgcagtaggcttcctatgtatttcattcctgg
aaacaccatgattgattagccagtaccaaaggtccaagcgagtcatgcca
ttataaatttcacctctcctgtgctgaccattactgggtatgttattata
aacattcttttgtctacgctgtccattataataactaggatcaccttgtc
tccggcgattcaatgctgccacctgacccttgttacctcgggatccaact
aaacccagtgaatttaattcatctaattgagcagaagcatctccaatgct
aagatctggcacaaggaaaagggaaagaacaaaacccttcaaatgtgctg
gtgcccctctcaccaatttgcgtcttatagagctggtgaaaggcatatct
tctggaccttcccattgtggacaattatgctttacacatatatccactct
agcattgcaatttccctaagtcttaaatcccttcatcaacactaagccac
gaatatcagcatctccagtcatttccagtaggccatcttttgataacact
cagcacattcaaacaacttttgacactttttactatgcgagcttcgtata
actagatctctactcagagacagttcatatctcagctgcctagttatgtc
cttccacccttattcca
gaattccagccctgttgttcctgcatgagaagtgacaaagacctcactgt
ttccatcttcaccattcttgaatgctgcaccaaagatgggaatcctgtgt
ctggggtacactcagttcacaagatgatgaggtgcctagtggaggagatt
ttagaacctcctgctaacagcaggctggctatcctggcatgggaatgaga
aaggtcttggacagtctggaaacatccaaccctgaagcaaaacagatcta
tagctgtatcctagcaggatccgggagaaaaatggctcaggactgagaca
cagggttaattttaaaagggtgactcagaaatgctgtaagccaatttact
gtttcctttcacttgggagatgtggtcttcagagttagaagtattaaaaa
ctgaagatggaatggctgtcttgacacatctggaacactagatattgtga
tgtcttcctagcactcctgggtctctggagcccgtgtttacacctcttga
agtcatctccatcagcatctccacgtttgaaccactcagcttggattctg
actggtaagagtaaaaagcttgtttttcacactcatacagagtacacatg
aatctctagattctcatgacccctacaggtcatggccagcatcacagcct
ctgtgatgtggcatagaggcagtcagacctctgtagtaaacccaatgagg
ttgctgctctcacaacgaggtagagtttgttccctgtacagcctcagctt
tctgatcagtaccgagaaccattttaaataataatgagcaaaataagaat
aattgttttaaccaggatggaaccacacctcatgcagggaatgtcaggct
gtgcatctgctgcctggccacctctgaaactaacaaccccaatgtcagga
acacaagtcaccattaacctctggtcataggggtacttaatttattgtta
taggtattccccagtcattactacaggggcttcacatgctatgtagagaa
gtgggatgagccttgcttttatcaaggttttcagatctatgtgctctgtt
cctctctatgtgtctctctgtctctcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_127179266_127180348
seq2: B6Ng01-284A14.g_66_1143

seq1  GAATTCCAGCCCTGTTGTTCCTGCATGAGAAGTGACAAAGACCTCACTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCCCTGTTGTTCCTGCATGAGAAGTGACAAAGACCTCACTGT  50

seq1  TTCCATCTTCACCATTCTTGAATGCTGCACCAAAGATGGGAATCCTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCTTCACCATTCTTGAATGCTGCACCAAAGATGGGAATCCTGTGT  100

seq1  CTGGGGTACACTCAGTTCACAAGATGATGAGGTGCCTAGTGGAGGAGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTACACTCAGTTCACAAGATGATGAGGTGCCTAGTGGAGGAGATT  150

seq1  TTAGAACCTCCTGCTAACAGCAGGCTGGCTATCCTGGCATGGGAATGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAACCTCCTGCTAACAGCAGGCTGGCTATCCTGGCATGGGAATGAGA  200

seq1  AAGGTCTTGGACAGTCTGGAAACATCCAACCCTGAAGCAAAACAGATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTTGGACAGTCTGGAAACATCCAACCCTGAAGCAAAACAGATCTA  250

seq1  TAGCTGTATCCTAGCAGGATCCGGGAGAAAAATGGCTCAGGACTGAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTATCCTAGCAGGATCCGGGAGAAAAATGGCTCAGGACTGAGACA  300

seq1  CAGGGTTAATTTTAAAAGGGTGACTCAGAAATGCTGTAAGCCAATTTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTAATTTTAAAAGGGTGACTCAGAAATGCTGTAAGCCAATTTACT  350

seq1  GTTTCCTTTCACTTGGGAGATGTGGTCTTCAGAGTTAGAAGTATTAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTTTCACTTGGGAGATGTGGTCTTCAGAGTTAGAAGTATTAAAAA  400

seq1  CTGAAGATGGAATGGCTGTCTTGACACATCTGGAACACTAGATATTGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGATGGAATGGCTGTCTTGACACATCTGGAACACTAGATATTGTGA  450

seq1  TGTCTTCCTAGCACTCCTGGGTCTCTGGAGCCCGTGTTTACACCTCTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCCTAGCACTCCTGGGTCTCTGGAGCCCGTGTTTACACCTCTTGA  500

seq1  AGTCATCTCCATCAGCATCTCCACGTTTGAACCACTCAGCTTGGATTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATCTCCATCAGCATCTCCACGTTTGAACCACTCAGCTTGGATTCTG  550

seq1  ACTGGTAAGAGTAAAAAGCTTGTTTTTCACACTCATACAGAGTACACATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTAAGAGTAAAAAGCTTGTTTTTCACACTCATACAGAGTACACATG  600

seq1  AATCTCTAGATTCTCATGACCCCTACAGGTCATGGCCAGCATCACAGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTAGATTCTCATGACCCCTACAGGTCATGGCCAGCATCACAGCCT  650

seq1  CTGTGATGTGGCATAGAGGCAGTCAGACCTCTGTAGTAAACCCAATGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATGTGGCATAGAGGCAGTCAGACCTCTGTAGTAAACCCAATGAGG  700

seq1  TTGCTGCTCTCACAACGAGGTAGAGTTTGTTCCCTGTACAGCCTCAGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCTCTCACAACGAGGTAGAGTTTGTTCCCTGTACAGCCTCAGCTT  750

seq1  TCTGATCAGTACCGAGAACCATTTTAAATAATAATGAGCAAAATAAGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCAGTACCGAGAACCATTTTAAATAATAATGAGCAAAATAAGAAT  800

seq1  AATTGTTTTAACCAGGATGGAACCACACCTCATGCAGGGAATGTCAGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTTTAACCAGGATGGAACCACACCTCATGCAGGGAATGTCAGGCT  850

seq1  GTGCATCTGCTGCCTGGCCACCTCTGAAACTAACAACCCCAATGTCAGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTGCATCTGCTGCCTGGCCACCTCTGAAACTAACAACCCCAATGTCA-GG  899

seq1  AACACAAGTCACCATTAACCTCTGGGTCATAGGGGTACTTAATTTATTGT  950
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AACACAAGTCACCATTAACCTCT-GGTCATAGGGGTACTTAATTTATTGT  948

seq1  TATAGGTATTCCCCAGTCATTAACTACAGGGGCTTCACATGCTATGTAGA  1000
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TATAGGTATTCCCCAGTCATT-ACTACAGGGGCTTCACATGCTATGTAGA  997

seq1  GAAGTGGGATGAGCCTTGCTTTTATCAAGTTTTTCAGATCTAATGTGGCT  1050
      ||||||||||||||||||||||||||||| ||||||||||| |||| |||
seq2  GAAGTGGGATGAGCCTTGCTTTTATCAAGGTTTTCAGATCT-ATGT-GCT  1045

seq1  CTTGTTCTCTCTATGTGTCTCTCTGTCTCTCAT  1083
      ||  | |||||||||||||||||||||||||||
seq2  CTGTTCCTCTCTATGTGTCTCTCTGTCTCTCAT  1078