BAC Information

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BAC

Clone NameB6Ng01-284C18
Chromosome5 (Build37)
Map Location 80,195,320 - 80,196,422
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284C18.bB6Ng01-284C18.g
ACCGA082942GA082943
length1,1881,107
definitionB6Ng01-284C18.b B6Ng01-284C18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctagaggttaggtgtatctttctcactggggccagatgagaca
gacagtctcctgctacttatgtgtcaggagccttgaacaagcctgtgtat
gctctttggtttatggcttagtctcttggagctctgtggggttcagtctc
ttggagtacctatgaggttgccatctccttccgtgccttcaatccttccc
ttaagttttccatagcggtccccaacctcagtgcaatgattggctgtaag
tattggcatcggtctcagtcagcttctgatagagctgctcaaaggacagc
catgctcctgtctttatgcacaacatgtcatcaggaatattgtcagggtt
tggtgcctgcccatgggatggattccaagttggatcagtcacttattggc
cattccttcactctctgctccattttagtccctgcatttttttaaagata
ggaataatgggtcaaaaattttgaaggtggtttggtgtccccatctctcc
actgtgggcccagtctaattactagaggtgagctcttcaggttccatctc
ggcacagtttattctggctaacattaaaccacattgaccacaatctctgg
gacttccatccatccatttgtctgcaaaattcatgatgtcctcatcttat
tacctgagtagtattcaatttcgtaaatgatccacattttctgtatacat
tattcagttgaggaacgtctggcttgcttccagattttggcttttagaaa
taagactgttttgagcatagtggagcaactctccttgtgttatggtggag
gatcttttgagtatatgccgaagagcattagcagtatagttcttcaagta
gaactatttccaattttctggggagctgacagattgatttccaaattggt
tatacaggttttcaatcataccagccatttcccttttctcaccatccatg
ctagcatgtgctgtcacttgtgtttttgatttagacattctatttggtgt
aagtaaaatctcaggtgtttgatttgcattccctgaagactaagatgtga
acattttttatgcatattttctgtatacattcaatgttattccccgttcc
agtttccatcagaactccatattccaattcccttccaatgcctctagaga
aggtgcctccctccttaccaactcaatctaaatgatgc

gaattcagtttttaattatataaaggtctagttttaggtcttattttcat
agtaatttaaaataataaaaatagtgaaaagcaaaagaataagcctaggt
aagttaattcattactatctattcctgttacaattaaatttttatttgtc
aaacatctaacattgaagttgtactcgggttgtatacatatgttctgaca
gcaaattctctgacatagagtaggaaatgtcacttacatagagagtaata
ataaataaatcctgaggttcagcgagttgggttgaaatcctttcatgctg
aaacctccagctacaggaggatgggcctggagtctttgccatggttgtct
ctctgctggctgatctactttatgtaataaactcctggatttgccttgaa
ctttatgttctctgttctgcttccttctgtgtacaaggccgttttaattt
ccccagagaactaaggtttctgaattgtgctccaaggtttcaggtgggag
aagaggaatggaagcatgaaagaagcttgtggttatctcacgcccacttt
ggtgtaattctggagtaaaagttaatggagtcattaagctcacgtctgag
aatgaatagaaattttcatctctcccgttcaatttgctcatcagaaaggt
tttcaatccctcctttcttccatacaaattgctcattagaacatcctaac
tttctactctctcatacaagatacatttctatcctgctaggacttttatt
cccagtggcagccccatcttgtgtttgagcaaggggaggaaaatataccc
acatccctagagagtgtcaactaactacattttgtttcaaatggtgatca
acttgtaattagtccttgttttaaaaaactaaaccccttcatttttagtt
acactcaaaatgttatttttcagttttatcacacttcttgagatcaattt
taaaatagttttgtggttaaatcagtagatacagttttttttttagacca
ataaatgctttttatattagttttggagagtattaataaatataaatgta
atactgaatagccacttttgatgcaagaatttgaattggtggctttaggc
acattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_80195320_80196422
seq2: B6Ng01-284C18.g_65_1171

seq1  GAATTCAGTTTTTAATTATATAAAGGTCTAGTTTTAGGTCTTATTTTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTTTAATTATATAAAGGTCTAGTTTTAGGTCTTATTTTCAT  50

seq1  AGTAATTTAAAATAATAAAAATAGTGAAAAGCAAAAGAATAAGCCTAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTTAAAATAATAAAAATAGTGAAAAGCAAAAGAATAAGCCTAGGT  100

seq1  AAGTTAATTCATTACTATCTATTCCTGTTACAATTAAATTTTTATTTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAATTCATTACTATCTATTCCTGTTACAATTAAATTTTTATTTGTC  150

seq1  AAACATCTAACATTGAAGTTGTACTCGGGTTGTATACATATGTTCTGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCTAACATTGAAGTTGTACTCGGGTTGTATACATATGTTCTGACA  200

seq1  GCAAATTCTCTGACATAGAGTAGGAAATGTCACTTACATAGAGAGTAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTCTCTGACATAGAGTAGGAAATGTCACTTACATAGAGAGTAATA  250

seq1  ATAAATAAATCCTGAGGTTCAGCGAGTTGGGTTGAAATCCTTTCATGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATCCTGAGGTTCAGCGAGTTGGGTTGAAATCCTTTCATGCTG  300

seq1  AAACCTCCAGCTACAGGAGGATGGGCCTGGAGTCTTTGCCATGGTTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCCAGCTACAGGAGGATGGGCCTGGAGTCTTTGCCATGGTTGTCT  350

seq1  CTCTGCTGGCTGATCTACTTTATGTAATAAACTCCTGGATTTGCCTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTGGCTGATCTACTTTATGTAATAAACTCCTGGATTTGCCTTGAA  400

seq1  CTTTATGTTCTCTGTTCTGCTTCCTTCTGTGTACAAGGCCGTTTTAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGTTCTCTGTTCTGCTTCCTTCTGTGTACAAGGCCGTTTTAATTT  450

seq1  CCCCAGAGAACTAAGGTTTCTGAATTGTGCTCCAAGGTTTCAGGTGGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGAGAACTAAGGTTTCTGAATTGTGCTCCAAGGTTTCAGGTGGGAG  500

seq1  AAGAGGAATGGAAGCATGAAAGAAGCTTGTGGTTATCTCACGCCCACTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAATGGAAGCATGAAAGAAGCTTGTGGTTATCTCACGCCCACTTT  550

seq1  GGTGTAATTCTGGAGTAAAAGTTAATGGAGTCATTAAGCTCACGTCTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAATTCTGGAGTAAAAGTTAATGGAGTCATTAAGCTCACGTCTGAG  600

seq1  AATGAATAGAAATTTTCATCTCTCCCGTTCAATTTGCTCATCAGAAAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATAGAAATTTTCATCTCTCCCGTTCAATTTGCTCATCAGAAAGGT  650

seq1  TTTCAATCCCTCCTTTCTTCCATACAAATTGCTCATTAGAACATCCTAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATCCCTCCTTTCTTCCATACAAATTGCTCATTAGAACATCCTAAC  700

seq1  TTTCTACTCTCTCATACAAGATACATTTCTATCCTGCTAGGACTTTTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACTCTCTCATACAAGATACATTTCTATCCTGCTAGGACTTTTATT  750

seq1  CCCAGTGGCAGCCCCATCTTGTGTTTGAGCAAGGGGAGGAAAATATACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGGCAGCCCCATCTTGTGTTTGAGCAAGGGGAGGAAAATATACCC  800

seq1  ACATCCCTAGAGAGTGTCAACTAACTACATTTTGTTTCAAATGGTGATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCTAGAGAGTGTCAACTAACTACATTTTGTTTCAAATGGTGATCA  850

seq1  ACTTGTAATTAGTCCTTGTTTTAAAAAACTAAACCCCTTCATTTTTAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTAATTAGTCCTTGTTTTAAAAAACTAAACCCCTTCATTTTTAGTT  900

seq1  ACACTCAAAATGTTATTTTTCAGTTTTATCACACTTCTTGAGATCAATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAAAATGTTATTTTTCAGTTTTATCACACTTCTTGAGATCAATTT  950

seq1  T-ATATAGTTTTGTGGTTAAATCAGTAGATACAG-TTTTTTTTTAGA-CA  997
      | | |||||||||||||||||||||||||||||| |||||||||||| ||
seq2  TAAAATAGTTTTGTGGTTAAATCAGTAGATACAGTTTTTTTTTTAGACCA  1000

seq1  ATAAATTGCTTTTATATTAGTTTTGGAGAGTA-TAATAAATATAAATGTA  1046
      ||||||   ||||||||||||||||||||||| |||||||||||||||||
seq2  ATAAATGCTTTTTATATTAGTTTTGGAGAGTATTAATAAATATAAATGTA  1050

seq1  ATACTG-ATAG-CACTTTTGATTGGAAGAATTTGGAATTTGGTGGC-TTA  1093
      |||||| |||| ||||||||| || |||||||||  | |||||||| |||
seq2  ATACTGAATAGCCACTTTTGA-TGCAAGAATTTG--AATTGGTGGCTTTA  1097

seq1  GGCACATTAT  1103
      ||||||||||
seq2  GGCACATTAT  1107


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