BAC Information

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BAC

Clone NameB6Ng01-284L20
Chromosome5 (Build37)
Map Location 105,736,522 - 105,737,452
singlet/doubletsinglet
Overlap genenone
Upstream geneIbsp, Mepe, Spp1, Pkd2, BC005561, LOC100042165, LOC100041172, D930016D06Rik, 2310012P17Rik, LOC640963, LOC100041199, LOC666726, C230055K05Rik, LOC100041216, Abcg3, LOC626471, EG545790, 5830443L24Rik, BC057170, Gbp4, LOC675363, LOC626578, Mpa2l
Downstream geneEG634650, Lrrc8b, Lrrc8c, Lrrc8d, LOC100042335, D830014E11Rik, LOC100042349, Zfp326, LOC626723, LOC546882, LOC671295
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284L20.bB6Ng01-284L20.g
ACCGA083367GA083368
length9481,175
definitionB6Ng01-284L20.b B6Ng01-284L20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcccctaaggtttcagtgtctggaggtcatgagggagaagtct
gagcatgactattggaggttgttcaagaaaggagtgaaggtagggaggtg
ggagcatgaaagaggagtaaaggtgaggaacagggagcccaggagaggag
tgagggtgaggagcagggagcacggtagaggagtgagagtaaagagtagg
gagcatgaagaggcatgagtgtgaggaacaagaagcatggcggaggagta
agggtgaggaacagggaacacaggagaggagtgagggtgaggagcaggga
gcacggaagctatgaggtgagcatgaggaggtgtctgatggtgttgacac
actacagctcctgaaaaacctgagaaaacaaagcaccttaccctcttttc
agccttgggaaccaaactcagggacctgaatgatgacctatttattatac
cacccaagatcatgtatgtgcatgtgtgtacatgtatgtgtcggtgtggg
tatgcatttctgtgcactgtgttatgtgtgtatgtatgtgtgcgtgtgca
tgtgtttgtgtgtgtgtgcatgtctgtacactgtaatatatgtgcatatg
tgtgcacgtgtgtgtgcctgttcatgctcatgtatgcagcaggcctgtct
acatgcagttgaaatatagaaagatttttaagtgtgtcatacattacacc
tgccatgaaatcgtgtgtctgggggtttgacctttgagaattttaccatc
ccaaactggaatgcacttttcagcttagcagggtttgctgtgcagccaga
gagacaacccctgacacagctcaagcccctgaaaaggaatttcctggaac
attgattctcattgaaaacttgaaaggacttgagctcttctgtaatctgc
ctgcagatttggcctcagttgttcccccttcaattcttgggaaaaaaa
gaattctcacctgagttaatactgaatggcagagaagcacatgaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcaaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcagtttggtggttcctc
agaaaattggacataatactaccagaagatccagcaatacctatcctggg
catatatccagaagatgttccaaccagtaagaaggacacctgctccacta
ttttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgccccccaacagaggaatggatacagaaaatgttgtacatttacacaat
ggagtactactcagctattaaaaggaatgaatttatgagattcctaggca
aatggatggacctggagggcatcatcctgagtgaggtaacacaatcacaa
aggaactcacacaatatgtactcactgattagtggatattagcccagaaa
cttaggatacccaagatataagatacaatttgttaaattcatgaaactca
agaagaaagaagaacaaagtgtggacactctgccctttcttagaattggg
aacaaaacacccatggaaagagttacagagataaagtttggagctgagac
gaaaggatggaccatgtaaagactgccatttccagggatccatcccataa
tcagcttccaaacgctgacaccattgcatagactagcaagattttgctgt
aaggacccagatatagctgtctcttgtgagaaaataccggggcctagcaa
acacagaagtggatgctcatagtctgcttattggatgggatcacagggcc
cccaatggaggagctagagaaagtaaccaggagctaagggatctgcacct
atacgtggaacaacattatgaactaaccagtacccagagctctgactcta
gctgcatatgtattctctcactgaaagagagtccattggaactgccaaac
ctttatatggccttagttacatgatcgacggccaacgtgaatggctggtt
acggtaagtctacgcactctctacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_105736522_105737452
seq2: B6Ng01-284L20.b_48_995 (reverse)

seq1  TTTTTTTCCCATGAATTGAAGGGGG-ACAACTGAGGCC-AGTCTGCA-GC  47
      ||||||||||| ||||||||||||| |||||||||||| | |||||| ||
seq2  TTTTTTTCCCAAGAATTGAAGGGGGAACAACTGAGGCCAAATCTGCAGGC  50

seq1  AGATTACAGAAGAGCTCAGTTCCTTTCA--GTTTCAATGAGAATC-ATGT  94
      ||||||||||||||||||  ||||||||   |||||||||||||| ||||
seq2  AGATTACAGAAGAGCTCAAGTCCTTTCAAGTTTTCAATGAGAATCAATGT  100

seq1  TCCAGGAAATTCC-TTTCAGGGGC-TGAGCTGTGTCA-GGGTTGTCTCTC  141
      ||||||||||||| |||||||||| |||||||||||| ||||||||||||
seq2  TCCAGGAAATTCCTTTTCAGGGGCTTGAGCTGTGTCAGGGGTTGTCTCTC  150

seq1  TGGCTGCACAGC-AACCCTGCTAAGCTG-AAAGTGCATT-CAGTTT-GGA  187
      |||||||||||| ||||||||||||||| |||||||||| |||||| |||
seq2  TGGCTGCACAGCAAACCCTGCTAAGCTGAAAAGTGCATTCCAGTTTGGGA  200

seq1  TGGT-AAATTCTCAAAGGTCAAA-CCCCAGACACACGATTTCATGGCAGG  235
      |||| |||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGGTAAAATTCTCAAAGGTCAAACCCCCAGACACACGATTTCATGGCAGG  250

seq1  TGT-ATGTATGACACACTT-AAAATCTTTCTATATTTCAACTGCATGTAG  283
      ||| ||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGTAATGTATGACACACTTAAAAATCTTTCTATATTTCAACTGCATGTAG  300

seq1  ACAGGCCTGCTGCATACATGAGCATGAACAGGCACACACACGTGCACACA  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCTGCTGCATACATGAGCATGAACAGGCACACACACGTGCACACA  350

seq1  TATGCACATATATTACAGTGTACAGACATGCACACACACACAAACACATG  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACATATATTACAGTGTACAGACATGCACACACACACAAACACATG  400

seq1  CACACGCACACATACATACACACATAACACAGTGCACAGAAATGCATACC  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGCACACATACATACACACATAACACAGTGCACAGAAATGCATACC  450

seq1  CACACCGACACATACATGTACACACATGCACATACATGATCTTGGGTGGT  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCGACACATACATGTACACACATGCACATACATGATCTTGGGTGGT  500

seq1  ATAATAAATAGGTCATCATTCAGGTCCCTGAGTTTGGTTCCCAAGGCTGA  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAATAGGTCATCATTCAGGTCCCTGAGTTTGGTTCCCAAGGCTGA  550

seq1  AAAGAGGGTAAGGTGCTTTGTTTTCTCAGGTTTTTCAGGAGCTGTAGTGT  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGGTAAGGTGCTTTGTTTTCTCAGGTTTTTCAGGAGCTGTAGTGT  600

seq1  GTCAACACCATCAGACACCTCCTCATGCTCACCTCATAGCTTCCGTGCTC  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACACCATCAGACACCTCCTCATGCTCACCTCATAGCTTCCGTGCTC  650

seq1  CCTGCTCCTCACCCTCACTCCTCTCCTGTGTTCCCTGTTCCTCACCCTTA  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCCTCACCCTCACTCCTCTCCTGTGTTCCCTGTTCCTCACCCTTA  700

seq1  CTCCTCCGCCATGCTTCTTGTTCCTCACACTCATGCCTCTTCATGCTCCC  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCGCCATGCTTCTTGTTCCTCACACTCATGCCTCTTCATGCTCCC  750

seq1  TACTCTTTACTCTCACTCCTCTACCGTGCTCCCTGCTCCTCACCCTCACT  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTTACTCTCACTCCTCTACCGTGCTCCCTGCTCCTCACCCTCACT  800

seq1  CCTCTCCTGGGCTCCCTGTTCCTCACCTTTACTCCTCTTTCATGCTCCCA  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCTGGGCTCCCTGTTCCTCACCTTTACTCCTCTTTCATGCTCCCA  850

seq1  CCTCCCTACCTTCACTCCTTTCTTGAACAACCTCCAATAGTCATGCTCAG  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTACCTTCACTCCTTTCTTGAACAACCTCCAATAGTCATGCTCAG  900

seq1  ACTTCTCCCTCATGACCTCCAGACACTGAAACCTTAGGGGCTGAATTC  931
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCCCTCATGACCTCCAGACACTGAAACCTTAGGGGCTGAATTC  948