BAC Information

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BAC

Clone NameB6Ng01-284P12
Chromosome5 (Build37)
Map Location 109,241,835 - 109,243,003
singlet/doubletsinglet
Overlap genenone
Upstream geneEvi5, 1700013N18Rik, Rpl5, 2900024C23Rik, LOC675566, Mtf2, Tmed5, Ccdc18, EG633606, LOC666614, Dr1, Pigg, Pde6b, Atp5k, Mfsd7, Pcgf3, LOC100042557, Cplx1, LOC100042571, Gak, Tmem175, Dgkq, Idua, Slc26a1, LOC100042616, Fgfrl1, LOC671564, 1810008K16Rik, EG627479
Downstream geneEG435864, EG667087, LOC100041615, V2r16, LOC545792, EG384219, Vmn2r12, LOC231589, EG231591, LOC667128, EG211223, EG384220, EG636052, EG384221, LOC667159, LOC667171, Tpte2, EG667185, LOC671695, LOC636173, LOC624831, LOC100041734, LOC100042749, LOC667198, 4930522L14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284P12.bB6Ng01-284P12.g
ACCGA083537GA083538
length1,1801,158
definitionB6Ng01-284P12.b B6Ng01-284P12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatagggtcacttatacatactatcatatcatctgcaaatagtga
tatttttatttctccctttccaaattgtatccccttagtctccttttttt
gtcaaattgctctggctaggacttcaactactagattgaataggtagggt
gtggggagctgcactcacatttgccattataagatggcactgacagctgt
gttctaagtagtaaataatctgcacatgtgcaggggcagttttcccgcca
tgtgctctgcctttctcgtgatgacaactgggccgatgggctgcagccaa
tcagggagtgacacgtcctaggcggaggataattctccttaaaagggacg
gggttctggcactccctctcttcgtctcttcgtctcttcacctcttcgtc
tctttctcttcgtcttttcctctgctctcttcctctgctctctgcgtctc
tctctcttcctctctgcctctctctgctgcgctcttcctctcttgctcct
gagtaagcaataaagctttcccacagaagattctggcttgttgcgtcttt
tctggccggttgcgaacccgtgtaagagtagggggaaagctggcagcctt
gtcgagaccctgagtttagtgggtatgctaccagcttctctccatttact
ttgatgttggctactggtttgctgtatattgcttttattatgtttaggta
tgggccttgaatttctgatctttccaagacttttatcctgaatgggtgtt
ggattttgtcaaatgctttctcagcatctaaggagatgatcatgtggttt
ttgtctttgagtttgtttatataatggattacattgatggattttcatat
attaaaccatccttgcatccctggaataaaacctacttggtcaggatgga
tgattgctctaatgtgttcttggattcagttagcgagaattttattgagt
attttttgcatcatatttgccagggactctgtgagtcagcttgaacagat
gaagtctgaagcttttcatgagaaagagtttcaagaaacttactctcgat
tcttgcctattccttaaccaataaaataatttcaaatcacttagctagtg
aatggattccagtgcacctgatagcttacgtaagtgatgccgttagaatt
gatctgaacagataggctgcaagggactct
gaattctctccaatacatgtgaaggtgaaaaataaagttaaaacaaagtt
aaaatgtccacaaatgagcattcaccaagcctttcagatttaaaggatgg
gaatggataacataggctgaatttcatttgagaagctgaaaatgtcatgt
gtagtggtaggatttaatacattgtgtttcttataggaaatgaataaaaa
cattgctttatttgatattcagtatctcttaacttctgtgattctattta
gaaaggggcaccatgagaacatgaacttagcttgaaaatgttaccaaaaa
tggagtcatgattagtcataatagagcaacttagccaggcatgtggaaaa
tgcatgtgatcaagactgaaggaagatgctgagacagctggattttaggt
tcaattctttcaattgctctctatgatatcctgtcttagtttgaattagt
cttttctttaatgataaatgtaacttagcttgttggcacattcctttatc
ttcagtaatcagaaggcaagacaggggttatttgtgagttcgagggacaa
tcctgtctacctatcaagttctatgcaatccaaagttccaaaacagactc
tttctcaatggctttgcgtatgaaaattgagtatttatgtgtcaacacat
ctaagttgtcaactcgagacttcacatgagatattaagttacttacgtga
tatagcaacatattaccaaaaaattagccaaagttattaatagtggattg
taatctgaagtcgactttatatgtttgaaaattaccataagaaaagagtc
agagcaagcaagtaagtcagaaagagatgagggaccagcttgccagttca
gaaaatcattttcttcggaaaatggattctaaagcttatatgcagatata
attctgtcatgttatagaaaaagaacattgataatagagtagatgagaat
gacgtttcaactgaaaggaccagccaaatatcttcaacaaattatagaag
aaaactccaaacctctagaaaggagatgccatgaactactagagcctacg
aacttccaaataggactgagacagaaatagaaattcctctcacagtaagt
atcgagaactacgatggcacctagataggatgaattagctcggtatggga
aaaaggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_109241835_109243003
seq2: B6Ng01-284P12.g_67_1224

seq1  GAATTCTCTCCAATACATGTGAAGGTGAAAAATAAAGTTAAAACAAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCAATACATGTGAAGGTGAAAAATAAAGTTAAAACAAAGTT  50

seq1  AAAATGTCCACAAATGAGCATTCACCAAGCCTTTCAGATTTAAAGGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTCCACAAATGAGCATTCACCAAGCCTTTCAGATTTAAAGGATGG  100

seq1  GAATGGATAACATAGGCTGAATTTCATTTGAGAAGCTGAAAATGTCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGATAACATAGGCTGAATTTCATTTGAGAAGCTGAAAATGTCATGT  150

seq1  GTAGTGGTAGGATTTAATACATTGTGTTTCTTATAGGAAATGAATAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGGTAGGATTTAATACATTGTGTTTCTTATAGGAAATGAATAAAAA  200

seq1  CATTGCTTTATTTGATATTCAGTATCTCTTAACTTCTGTGATTCTATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTTTATTTGATATTCAGTATCTCTTAACTTCTGTGATTCTATTTA  250

seq1  GAAAGGGGCACCATGAGAACATGAACTTAGCTTGAAAATGTTACCAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGGCACCATGAGAACATGAACTTAGCTTGAAAATGTTACCAAAAA  300

seq1  TGGAGTCATGATTAGTCATAATAGAGCAACTTAGCCAGGCATGTGGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCATGATTAGTCATAATAGAGCAACTTAGCCAGGCATGTGGAAAA  350

seq1  TGCATGTGATCAAGACTGAAGGAAGATGCTGAGACAGCTGGATTTTAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGATCAAGACTGAAGGAAGATGCTGAGACAGCTGGATTTTAGGT  400

seq1  TCAATTCTTTCAATTGCTCTCTATGATATCCTGTCTTAGTTTGAATTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCTTTCAATTGCTCTCTATGATATCCTGTCTTAGTTTGAATTAGT  450

seq1  CTTTTCTTTAATGATAAATGTAACTTAGCTTGTTGGCACATTCCTTTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTTAATGATAAATGTAACTTAGCTTGTTGGCACATTCCTTTATC  500

seq1  TTCAGTAATCAGAAGGCAAGACAGGGGTTATTTGTGAGTTCGAGGGACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTAATCAGAAGGCAAGACAGGGGTTATTTGTGAGTTCGAGGGACAA  550

seq1  TCCTGTCTACCTATCAAGTTCTATGCAATCCAAAGTTCCAAAACAGACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCTACCTATCAAGTTCTATGCAATCCAAAGTTCCAAAACAGACTC  600

seq1  TTTCTCAATGGCTTTGCGTATGAAAATTGAGTATTTATGTGTCAACACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAATGGCTTTGCGTATGAAAATTGAGTATTTATGTGTCAACACAT  650

seq1  CTAAGTTGTCAACTCGAGACTTCACATGAGATATTAAGTTACTTACGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTTGTCAACTCGAGACTTCACATGAGATATTAAGTTACTTACGTGA  700

seq1  TATAGCAACATATTACCAAAAAATTAGCCAAAGTTATTAATAGTGGATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCAACATATTACCAAAAAATTAGCCAAAGTTATTAATAGTGGATTG  750

seq1  TAATCTGAAGTCGACTTTATATGTTTGAAAATTACCATAAGAAAAGAGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGAAGTCGACTTTATATGTTTGAAAATTACCATAAGAAAAGAGTC  800

seq1  AGAGCAAGCAAGTAAGTCAGAAAGAGATGAGGGACCAGCTTGCCAGTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAGCAAGTAAGTCAGAAAGAGATGAGGGACCAGCTTGCCAGTTCA  850

seq1  GAAAATCATTTTCTTCGGAAAATGGATTCTAAAGCTTATATGCAGATATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCATTTTCTTCGGAAAATGGATTCTAAAGCTTATATGCAGATATA  900

seq1  ATTCTGTCATGTTTATAGAAAAAGAACATTGATAATAGGAGTAGATGAGA  950
      ||||||||||| ||||||||||||||||||||||||| ||||||||||||
seq2  ATTCTGTCATG-TTATAGAAAAAGAACATTGATAATA-GAGTAGATGAGA  948

seq1  ATGAAGGTTTTCAACTGAAAGGACCAG-CAAATATCTTCAACAAAATTAT  999
      |||| |  ||||||||||||||||||| |||||||||||||| |||||||
seq2  ATGACG--TTTCAACTGAAAGGACCAGCCAAATATCTTCAAC-AAATTAT  995

seq1  AGAAGAAAACTTCCCAAACCTCTAGAAA-GAGATGCCCATGAACATACAA  1048
      |||||||||||  ||||||||||||||| |||||| |||||||| ||| |
seq2  AGAAGAAAACT--CCAAACCTCTAGAAAGGAGATG-CCATGAAC-TACTA  1041

seq1  GAAGCCTACAGAAC-TCCAAATA-GACTGGAGCAGAAA-AGAAATTCCTC  1095
      | ||||||| |||| |||||||| |||||   |||||| |||||||||||
seq2  G-AGCCTAC-GAACTTCCAAATAGGACTGAGACAGAAATAGAAATTCCTC  1089

seq1  CCAACACATAATAATC-AGAACAACAAATGCACTAAATAATGATAGAAT-  1143
       | |||  |||  ||| ||||| || |  ||||  |     ||||| || 
seq2  TC-ACA-GTAAGTATCGAGAACTACGATGGCACCTA-----GATAGGATG  1132

seq1  ATTAAAATCAGTAAGGGAAAAAGGTC  1169
      | | |  || ||| ||||||||||||
seq2  AATTAGCTCGGTATGGGAAAAAGGTC  1158