BAC Information

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BAC

Clone NameB6Ng01-285H03
Chromosome5 (Build37)
Map Location 11,919,154 - 11,919,967
singlet/doubletsinglet
Overlap geneLOC545732
Upstream geneLOC667880, EG667888, EG667901, EG667907, LOC667916, LOC100041472, EG545728, LOC100042819, LOC667942, LOC667948, EG667949, Speer1-ps1, EG667956, LOC667961, EG667967, LOC100042858, LOC667974, EG667986, EG623898, EG668001, LOC668008, EG668011, LOC668017, EG668021, LOC623998, EG668043
Downstream geneLOC384144, LOC100041626, EG668059, Sema3d, LOC668015, LOC100042917, LOC668069
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285H03.bB6Ng01-285H03.g
ACCGA083894GA083895
length814894
definitionB6Ng01-285H03.b B6Ng01-285H03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacatgaaagtatttttgtattcttctacctaaaggggctcga
agacacacatcatccactgcacctgacctaagtaagaaggagttcaaaaa
ggaaaaagagaggctgaccacagagctgcacctcctcatccagctgagaa
atgagcagagagatcacctgatcgatttcaaaaagagttccaattacaat
aggtatgcactgctccaaaccctgtggtgtcagtctggggtcttcaatgt
cagcctcatcatatcctttataggaggtgggttctatgaagctgtaccac
cagattgtccctatgcccaacctcatgtccatgaatgcttcatagcagag
aggcagaacctgaagcttggtcaggagggagatgagaaatggactcttct
gcttcctccagtagaaaagaaggacttgtattctgaatgaagaattcagg
gatagaggcagtggagagtgagttcccagcatgcatttggaaggcacttg
acaggatgtggctttgtaaggttgtaggtgatttgagtgaatgctgagtg
tttatacttgcctggcaggtgcctgagtgcttagaagctcctcgtagtat
ctagaggggcctgttcccacattttccttctcagtgtatatctagaaggc
ctgaggctcattcctgttcctctctgttgccttatactgcaagacagtaa
tgctgcatacatttcttttgcatcgcactgtgctctctgtttctgtctgt
gtctctcattctgtttccttttatcctgtgtgtgtgtgtgtgtttgtgtg
tgtgtgtgtgtgtg
gaattccaggaagtctttcatttctttctttatttcttccttgaccaagc
tatcactgagtaaaagttgttcagtttccatgtgttttgggcttttggta
gttttgttgttattgaagatcagccataggctatggtggtctgatagaat
gcatggtattatttcaatcttcttgtatctcttgagggttgttttttggc
cattcatgtggtcaattttgaagaaggtatcatgacatgctgagaagaag
gagtattctttctttaagcatgaaatgttgtgtagggatctgttaaatcc
atttggttcataacctgtcttagtttcactgtgtctctgtttactttctg
tttcaatggcctatccattggtgagagtggggtgttgaaatctcccacta
ttattgtgtggggttcaatctttgttttgagttttagtaaagtttctttt
atgaatttggttgctcttacatttagggcatagatgttcataattgaggc
tttctcttggtggattttctccttgatgaatatgaagtgtctttcttcat
catgcttgataacttttggttgaaagtctattttattggatattagaatg
gcaactcctgcctttttcctgggaccatttgcttggaaggcctttttcca
tccctttactctaagatagtatctgtcttttgttgttgagatgtgtttct
tgtatgcagcaaaaatgctgtagcatgtttgcatatctagtctgtttagc
ttatgttccttttataggtcagtcgagtccgttaatattggggagatagt
aaagagagattgactttttggttcctgacatgctttgttttgtagggctt
tttatatgctgttggctcttctgattttgggctttgttgtgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_11919154_11919967
seq2: B6Ng01-285H03.b_45_858

seq1  GAATTCTCACATGAAAGTATTTTTGTATTCTTCTACCTAAAGGGGCTCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACATGAAAGTATTTTTGTATTCTTCTACCTAAAGGGGCTCGA  50

seq1  AGACACACATCATCCACTGCACCTGACCTAAGTAAGAAGGAGTTCAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACATCATCCACTGCACCTGACCTAAGTAAGAAGGAGTTCAAAAA  100

seq1  GGAAAAAGAGAGGCTGACCACAGAGCTGCACCTCCTCATCCAGCTGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAGAGAGGCTGACCACAGAGCTGCACCTCCTCATCCAGCTGAGAA  150

seq1  ATGAGCAGAGAGATCACCTGATCGATTTCAAAAAGAGTTCCAATTACAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCAGAGAGATCACCTGATCGATTTCAAAAAGAGTTCCAATTACAAT  200

seq1  AGGTATGCACTGCTCCAAACCCTGTGGTGTCAGTCTGGGGTCTTCAATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATGCACTGCTCCAAACCCTGTGGTGTCAGTCTGGGGTCTTCAATGT  250

seq1  CAGCCTCATCATATCCTTTATAGGAGGTGGGTTCTATGAAGCTGTACCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCATCATATCCTTTATAGGAGGTGGGTTCTATGAAGCTGTACCAC  300

seq1  CAGATTGTCCCTATGCCCAACCTCATGTCCATGAATGCTTCATAGCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTGTCCCTATGCCCAACCTCATGTCCATGAATGCTTCATAGCAGAG  350

seq1  AGGCAGAACCTGAAGCTTGGTCAGGAGGGAGATGAGAAATGGACTCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAACCTGAAGCTTGGTCAGGAGGGAGATGAGAAATGGACTCTTCT  400

seq1  GCTTCCTCCAGTAGAAAAGAAGGACTTGTATTCTGAATGAAGAATTCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTCCAGTAGAAAAGAAGGACTTGTATTCTGAATGAAGAATTCAGG  450

seq1  GATAGAGGCAGTGGAGAGTGAGTTCCCAGCATGCATTTGGAAGGCACTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAGGCAGTGGAGAGTGAGTTCCCAGCATGCATTTGGAAGGCACTTG  500

seq1  ACAGGATGTGGCTTTGTAAGGTTGTAGGTGATTTGAGTGAATGCTGAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATGTGGCTTTGTAAGGTTGTAGGTGATTTGAGTGAATGCTGAGTG  550

seq1  TTTATACTTGCCTGGCAGGTGCCTGAGTGCTTAGAAGCTCCTCGTAGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACTTGCCTGGCAGGTGCCTGAGTGCTTAGAAGCTCCTCGTAGTAT  600

seq1  CTAGAGGGGCCTGTTCCCACATTTTCCTTCTCAGTGTATATCTAGAAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGGGGCCTGTTCCCACATTTTCCTTCTCAGTGTATATCTAGAAGGC  650

seq1  CTGAGGCTCATTCCTGTTCCTCTCTGTTGCCTTATACTGCAAGACAGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCTCATTCCTGTTCCTCTCTGTTGCCTTATACTGCAAGACAGTAA  700

seq1  TGCTGCATACATTTCTTTTGCATCGCACTGTGCTCTCTGTTTCTGTCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCATACATTTCTTTTGCATCGCACTGTGCTCTCTGTTTCTGTCTGT  750

seq1  GTCTCTCATTCTGTTTCCTTTTATCCTGTGTGTGTGTGTGTGTTTGTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCATTCTGTTTCCTTTTATCCTGTGTGTGTGTGTGTGTTTGTGTG  800

seq1  TGTGTGTGTGTGTG  814
      ||||||||||||||
seq2  TGTGTGTGTGTGTG  814