BAC Information

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BAC

Clone NameB6Ng01-286P23
Chromosome5 (Build37)
Map Location 126,372,891 - 126,373,686
singlet/doubletsinglet
Overlap genenone
Upstream gene3110032G18Rik, Ncor2, Scarb1, Ubc, Dhx37, Bri3bp, Aacs, Tmem132b, EG231736
Downstream geneLOC100039178, LOC665760, LOC100040327
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286P23.bB6Ng01-286P23.g
ACCGA085045GA085046
length1,157892
definitionB6Ng01-286P23.b B6Ng01-286P23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctctgaagaaacagacttggaggaggaagcagctcattatga
gagaaaagggtaccagccagataaaatgctagctaatcagttaaggaaaa
agccaaaagcggctggcgaaggccagcatgctgctcagcctccgggcagt
cggcttcaaggtcatagtgcacttccgccctatgcggagcccccgccctg
cgtagtgcgtcagccctgcgcagagaggcaatgcgcagactcgttcattc
caaaggaggaacaaaggaaaatacaacaggcattttcggtctttgaagga
gccgagggtgggagtgtccacgctccgatagaatatgtgcagattaaaga
gcttgccgagtcggtccgtaaatatggaaccaatgctaattttaccttgg
tgcagttagacaggcttgctggcatggcactaactcctgccgactggcaa
atgattgcaaaagccgctctccctagtatgggcaaatatatggaatggag
agctctatggcaagaggctgcacaagcgcaggcccgagcaaacgctgctg
ctttgactccagagcagagagattggacttttgacttgttaacgggtcag
ggagcttatactgctgatcaaacaaactaccattggggagcttatgccca
aatttcctccatggctattagggcctggaaggcgctctcccgagcaggtg
aggccactggacaactaacaaagatcgtccagagacctcaggagtccttc
tcagattttgtggccagaatgacagaggcagcagagcgtatttttggaga
ttcagagcaagccgcacctctggtagaacacaggagtgccgagcagccat
agccccaagaaagaacaaaggtttacaagactggctcaggtttgtcggga
gcttggggacctctcattgtgcgttacttccattcagtatgagaatttac
tagggcagctatttgtcaaaagtctttctcagtatatgttacagatggac
gctgaatttgaacagacccttcggatgagactcagtcactcacgtgctga
cttgtcctgacaaagataccatgaatctcctcagcaattctctaaggatt
ggatgatgcatatgaatactgctggatagtcgctcatagtagtcctggac
agactca
gaattccaccctgtctttcttcatctcaatctgtgatggtttaaatatgc
ttggcccagggaatggcactattaggaggtatgaccttgttggagtaggt
gtgtcactgtgggtctggactttaatgcctgggaagttagtcttcttcaa
gctgcctttagaacaagagatggaattctcagatcctccagcaccatgcc
tgcctggacactgtcatgtttctaacttgatgataacggactgaacctct
gaacttgtaagccagtcccaattaaatgttgtcctttatgagagttgcct
tgggaatggtgtctgttcacagcagtaaaaccctaactatgacacaatca
tagcctgggttcagtatgagcaccctgtatatattaccctcccattatca
gctagaagccttcttagggattggattaatgtggcttttatcatattgct
gggctaaagtatctcattttacttaataggaatcccaaaagtccaaaagt
gactcctaataccacctgtatggtgcttcctttaagtgaatatataaaac
taaaatatgtaccaactcagtaaagagacaaatgagtttagtattgcaac
cgctgcttactatttttaatgatatgatgtgaggatttatgagataaact
agatttcgaggtgcatgttcccaggaaaagacacagtgtatgtgtgcaca
acacactctggttctaggtacacactgcgtttggagaatatccttcactg
agacaggggacaactagatttgccattgtatgtctagtataaatctagta
tcaatgcagtgctatggtccacactctggtgttttttattaaactttttt
gtgttacacacaccaaatgggaagagagagagatagagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_126372891_126373686
seq2: B6Ng01-286P23.g_152_957

seq1  TTGTTGGAGTAGGTGTGTCACTGTGGGTCTGGACTTTAATGCCTGGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGAGTAGGTGTGTCACTGTGGGTCTGGACTTTAATGCCTGGGAAG  50

seq1  TTAGTCTTCTTCAAGCTGCCTTTAGAACAAGAGATGGAATTCTCAGATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTTCTTCAAGCTGCCTTTAGAACAAGAGATGGAATTCTCAGATCC  100

seq1  TCCAGCACCATGCCTGCCTGGACACTGTCATGTTTCTAACTTGATGATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCACCATGCCTGCCTGGACACTGTCATGTTTCTAACTTGATGATAA  150

seq1  CGGACTGAACCTCTGAACTTGTAAGCCAGTCCCAATTAAATGTTGTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACTGAACCTCTGAACTTGTAAGCCAGTCCCAATTAAATGTTGTCCTT  200

seq1  TATGAGAGTTGCCTTGGGAATGGTGTCTGTTCACAGCAGTAAAACCCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGAGTTGCCTTGGGAATGGTGTCTGTTCACAGCAGTAAAACCCTAA  250

seq1  CTATGACACAATCATAGCCTGGGTTCAGTATGAGCACCCTGTATATATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGACACAATCATAGCCTGGGTTCAGTATGAGCACCCTGTATATATTA  300

seq1  CCCTCCCATTATCAGCTAGAAGCCTTCTTAGGGATTGGATTAATGTGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCATTATCAGCTAGAAGCCTTCTTAGGGATTGGATTAATGTGGCT  350

seq1  TTTATCATATTGCTGGGCTAAAGTATCTCATTTTACTTAATAGGAATCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCATATTGCTGGGCTAAAGTATCTCATTTTACTTAATAGGAATCCC  400

seq1  AAAAGTCCAAAAGTGACTCCTAATACCACCTGTATGGTGCTTCCTTTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCCAAAAGTGACTCCTAATACCACCTGTATGGTGCTTCCTTTAAG  450

seq1  TGAATATATAAAACTAAAATATGTACCAACTCAGTAAAGAGACAAATGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATATAAAACTAAAATATGTACCAACTCAGTAAAGAGACAAATGAG  500

seq1  TTTAGTATTGCAACCGCTGCTTACTATTTTTAATGATATGATGTGAGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTATTGCAACCGCTGCTTACTATTTTTAATGATATGATGTGAGGAT  550

seq1  TTATGAGATAAACTAGA-TTCGAGGTGCATGTTCCCAGGAAAAGACACAG  599
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTATGAGATAAACTAGATTTCGAGGTGCATGTTCCCAGGAAAAGACACAG  600

seq1  TGTATGTGTGCACAACACACTCTGGTTCTAGGTACACACTGCG-TTGGAG  648
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGTATGTGTGCACAACACACTCTGGTTCTAGGTACACACTGCGTTTGGAG  650

seq1  AATATCCTTCACTGAGACAGGGGACAACTAGA-TTGCCATTGTATGTCTA  697
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AATATCCTTCACTGAGACAGGGGACAACTAGATTTGCCATTGTATGTCTA  700

seq1  GTATAAA-CTAGTATCAATGCAGTGCTATGGT-CACACTCTGGTG-TTTT  744
      ||||||| |||||||||||||||||||||||| |||||||||||| ||||
seq2  GTATAAATCTAGTATCAATGCAGTGCTATGGTCCACACTCTGGTGTTTTT  750

seq1  TATTAA--CTTTTTGTGTTACACACA-CAAAT-GGAAGAGAGAGAGAGAG  790
      ||||||   ||||||||||||||||| ||||| |||||||||||||| ||
seq2  TATTAAACTTTTTTGTGTTACACACACCAAATGGGAAGAGAGAGAGATAG  800

seq1  AGAGAG  796
      ||||||
seq2  AGAGAG  806