BAC Information

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BAC

Clone NameB6Ng01-287C07
Chromosome5 (Build37)
Map Location 6,127,866 - 6,128,991
singlet/doubletsinglet
Overlap genenone
Upstream genePftk1, 1700015F17Rik, Cldn12, Gtpbp10, LOC667699, EG667705, A330021E22Rik, Steap2, Steap1, LOC727711, LOC546854
Downstream geneLOC100041208, EG435830
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287C07.bB6Ng01-287C07.g
ACCGA085147GA085148
length1,2311,116
definitionB6Ng01-287C07.b B6Ng01-287C07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagcattgtttacaattttttggtataaaacccagctctattgta
atcccctatgatgggtatcagcaaaaggtcctaacagcaaatattgatga
gtgggctattttagcctgtattaatgagggcccatttgataatcattatc
ccaaacatccgttaatgaccttttttaaggaacatccagtcattttccct
caagtagtgagaaaaacacccattaaaaatgcagttaacatgtttactga
tggatcaaaaaccggatgtggagtatatatggtagaggggaaagatcctg
ttgtcaggcagcattagccctgtactccacagatagtggaattacaaata
gttactgaggtcattaaggattgtgattttccttttaatctaatttcaga
ttcacaatatgtagttaatttggttttatccctagaagtggctggccaaa
taaaagctcgtagtaccatcccagcctctgccttacaattacagaagttg
ctgtgggaaagacgccaaccattatatattggacatgtccatgcccatag
tgggcttccaggacccttaagtaggggaaatgatattgtggataattgta
ctcgtatggagttcatatttttaacatcccctatggagttagcctcacaa
tttcattctaaatttcatgttaatgctaaaactctgcagagaaaatttgg
aatctctagagcacaagctcgggatgtagtcattacctgtggatgttgcc
ttgagtttcaatgcctgccttcttatggagtgaatcctagaggattgctc
cctctacaggtgtggcagatggatgtgacacatttttcagaatttggcaa
attgaaatacattcatatatccattgatacatgttcaggaatagtttatg
catctctcatggcaggggaaaaggcctcccatgtatacacattgtttaga
ggcctggacatcttggggtaaaccccaacacttaaaacagatgatggccc
tgcattatactgcaaaaccctggtgtccttttttgtcaacaggtggaagt
aacagttaacatgaactgcccatataatcttcaaggcaagatctttgaca
ccacatgacctttaaagatattatataacaaatgggaatatgcatggcca
ttccaaaatagacttccttagccttttaccttaatttcatggtaagagag
gtgcctcttgctcttaagtagcaactggcta

gaattctttgtaaagagttctctatgtacccacaagttatatgcttatgt
aatcactaccaggctatgtagttattgcttctggtacatttacttggttt
atttctgcattttagttaatatacttctagactagttatgagaacataat
tgatacttgggaatagaattactaaaatgagtatatgcttcctttttatt
ttagtgtgtatcattagttttagttgcttttcctattacatcatttgtct
tttgcagttcctatggttttgccagatcaaaaactatctaagcaaaaatg
aaacaagttggttgaaaagaaacttcaaaaatgaaattgataacacttaa
ttttggggattttagctatttttatatgaataaaatattctctgtcattt
gatttatgtatgaagaggagtgcctatgcagttaaatagtatattagctc
tttataaaccatctcatgtttattcacaaggcaactggagttatctattt
caaatttgcttcagaaagggaaattaacctagagttaaagttaaatgatg
aattgtctgataaatggttgtgtgataatgtctgtgttagcaagtagcac
atcatagcatgacaaaattctagtgccgagtttatatttctaatatttaa
tggatgtatgcgatttaaccatatgtagaatagatcatctacagaatcag
aaaagggattagagatgtattcattgcagataattcagagttccattcat
aatcttccagggttcctgtgtgtgatctgaggtaaactatttccgcaggt
aaaaacctacccactgacattgtttatcagcgagattgaagactacactc
ttctctagtggatggtatctttttaatcagttagataatttcgaggaatg
cactcaaattttccccatataccctacattcttttacactgggtttatta
gatattattttatttcttattataatattcctctagtttgaaattgattt
ttttattctcttcagatataaatacagcaaaagaagaaatgctaaatatc
aaagattacattttggccattaatgtgagtttgcaaaatgctactggagt
attgctcatattttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_6127866_6128991
seq2: B6Ng01-287C07.g_65_1180

seq1  GAATTCTTTGTAAAGAGTTCTCTATGTACCCACAAGTTATATGCTTATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTAAAGAGTTCTCTATGTACCCACAAGTTATATGCTTATGT  50

seq1  AATCACTACCAGGCTATGTAGTTATTGCTTCTGGTACATTTACTTGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTACCAGGCTATGTAGTTATTGCTTCTGGTACATTTACTTGGTTT  100

seq1  ATTTCTGCATTTTAGTTAATATACTTCTAGACTAGTTATGAGAACATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGCATTTTAGTTAATATACTTCTAGACTAGTTATGAGAACATAAT  150

seq1  TGATACTTGGGAATAGAATTACTAAAATGAGTATATGCTTCCTTTTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTTGGGAATAGAATTACTAAAATGAGTATATGCTTCCTTTTTATT  200

seq1  TTAGTGTGTATCATTAGTTTTAGTTGCTTTTCCTATTACATCATTTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTGTATCATTAGTTTTAGTTGCTTTTCCTATTACATCATTTGTCT  250

seq1  TTTGCAGTTCCTATGGTTTTGCCAGATCAAAAACTATCTAAGCAAAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGTTCCTATGGTTTTGCCAGATCAAAAACTATCTAAGCAAAAATG  300

seq1  AAACAAGTTGGTTGAAAAGAAACTTCAAAAATGAAATTGATAACACTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGTTGGTTGAAAAGAAACTTCAAAAATGAAATTGATAACACTTAA  350

seq1  TTTTGGGGATTTTAGCTATTTTTATATGAATAAAATATTCTCTGTCATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGGATTTTAGCTATTTTTATATGAATAAAATATTCTCTGTCATTT  400

seq1  GATTTATGTATGAAGAGGAGTGCCTATGCAGTTAAATAGTATATTAGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATGTATGAAGAGGAGTGCCTATGCAGTTAAATAGTATATTAGCTC  450

seq1  TTTATAAACCATCTCATGTTTATTCACAAGGCAACTGGAGTTATCTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAACCATCTCATGTTTATTCACAAGGCAACTGGAGTTATCTATTT  500

seq1  CAAATTTGCTTCAGAAAGGGAAATTAACCTAGAGTTAAAGTTAAATGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTGCTTCAGAAAGGGAAATTAACCTAGAGTTAAAGTTAAATGATG  550

seq1  AATTGTCTGATAAATGGTTGTGTGATAATGTCTGTGTTAGCAAGTAGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCTGATAAATGGTTGTGTGATAATGTCTGTGTTAGCAAGTAGCAC  600

seq1  ATCATAGCATGACAAAATTCTAGTGCCGAGTTTATATTTCTAATATTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAGCATGACAAAATTCTAGTGCCGAGTTTATATTTCTAATATTTAA  650

seq1  TGGATGTATGCGATTTAACCATATGTAGAATAGATCATCTACAGAATCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTATGCGATTTAACCATATGTAGAATAGATCATCTACAGAATCAG  700

seq1  AAAAGGGATTAGAGATGTATTCATTGCAGATAATTCAGAGTTCCATTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGATTAGAGATGTATTCATTGCAGATAATTCAGAGTTCCATTCAT  750

seq1  AATCTTCCAGGGTTCCTGTGTGTGATCTGAGGTAAACTATTTCCGCAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCCAGGGTTCCTGTGTGTGATCTGAGGTAAACTATTTCCGCAGGT  800

seq1  AAAAACCTACCCACTGACATTGTTTATCAGCGAGATTGAAGACTACACTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCTACCCACTGACATTGTTTATCAGCGAGATTGAAGACTACACTC  850

seq1  TTCTCTAGTGGATGGTATCTTTTTAATCAGTTAGATAATTTCGAGGAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAGTGGATGGTATCTTTTTAATCAGTTAGATAATTTCGAGGAATG  900

seq1  CACTCAAATTTTCCCCATATACCCTACATTCTTTTACACTGGTTTTATTA  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CACTCAAATTTTCCCCATATACCCTACATTCTTTTACACTGGGTTTATTA  950

seq1  GATATTATTTTATTTCTTATTATAATTATTTCCTCTTAGTTTGAAATTTG  1000
      ||||||||||||||||||||||||||   |||||| |||||||||| |||
seq2  GATATTATTTTATTTCTTATTATAAT--ATTCCTC-TAGTTTGAAA-TTG  996

seq1  ATTTTTTTATTCTCTTCAGATAATTAAATACAGCATA--GAGAAATGCTT  1048
      ||||||||||||||||||||||  ||||||||||| |   ||||||||| 
seq2  ATTTTTTTATTCTCTTCAGATA--TAAATACAGCAAAAGAAGAAATGCT-  1043

seq1  AAATTATCCAAAGATTACATTTTGGCCATTAATGTGAGTTTTGCAAAAAT  1098
       || ||| |||||||||||||||||||||||||||||| |||||||||  
seq2  -AAATAT-CAAAGATTACATTTTGGCCATTAATGTGAG-TTTGCAAAA--  1088

seq1  TGTTACT-GAGTATTGCTCATAATTTTCT  1126
      || |||| ||||||||||||| |||||||
seq2  TGCTACTGGAGTATTGCTCAT-ATTTTCT  1116


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