BAC Information

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BAC

Clone NameB6Ng01-287P23
Chromosome5 (Build37)
Map Location 49,122,692 - 49,123,371
singlet/doubletsinglet
Overlap geneKcnip4
Upstream geneLOC100040876, Slit2, 4933428G09Rik
Downstream geneLOC100041668, LOC100041659, EG433885
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287P23.b
ACCGA085775
length725
definitionB6Ng01-287P23.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctcagtgagcctggacgttaattatgattctaaagttcccaa
gtgatccttctgaatgtctggtttgagtatccttgtctgtctgccgcaaa
accattttacattctaaaatttgctctccccttgttcccttgatatatat
aacaatgcaattgaaaaatacttttcactagaaagacagcattttcaaca
attggtgctggcacaactggttgttatcatgtggaagaatgcgaatcaat
ccattcttctctccttgtactgaggacaaatctaagtggatcagggaact
tcacttaaaacctgatacaccgacacttatagaggagaaagtggggaaaa
gccttgaagatatgggcacaggggaaaaattcctgaacagaacagcaatg
gcttgtgctgtaagatcgagaattgacaaatgggacctaatgaaactcca
aagtttctgcaaggcaaaagataccgtgaataagacaaaaagaccaccaa
cagattgggaaaggatctttacctatcctaaatcagataggggactaata
tccaacatatatgaagaactcaagaaggtggacttctcaaaatcaactaa
cccctttaaaaaatggggctcgtaactgaacacagaattctcacctgagg
aataccgaatggcacagaagcacctgaaataatgttctacatccttaatc
atcagggaaatgcaaatcagaacaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_49122692_49123371
seq2: B6Ng01-287P23.b_43_721

seq1  GAATTCTTCTCAAGTAAGCCTGGACATTAATTATGATTCTAAAGTTCCCA  50
      ||||||||||| ||| ||||||||| ||||||||||||||||||||||||
seq2  GAATTCTTCTC-AGTGAGCCTGGACGTTAATTATGATTCTAAAGTTCCCA  49

seq1  AGTGATCCTTCTGAATGTCTGGTTTGAGTATCCTTGTATGTCTGCCTCAG  100
      ||||||||||||||||||||||||||||||||||||| |||||||| || 
seq2  AGTGATCCTTCTGAATGTCTGGTTTGAGTATCCTTGTCTGTCTGCCGCAA  99

seq1  AACCATTTTACATTCTAAAATTTGCTCTCCCCTTGTTCCCTTGATATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTTTACATTCTAAAATTTGCTCTCCCCTTGTTCCCTTGATATATA  149

seq1  TAACAATGCAATTTAAAAATACTTTTCACTAGAAAGACAGCATTTTCAAC  200
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TAACAATGCAATTGAAAAATACTTTTCACTAGAAAGACAGCATTTTCAAC  199

seq1  AATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGA  250
      ||||||||||||||||||||||||||||||||| |||||||||||||| |
seq2  AATTGGTGCTGGCACAACTGGTTGTTATCATGTGGAAGAATGCGAATCAA  249

seq1  TCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAAC  300
      ||||| ||| |||||||||||| ||| ||||||||||||||||| |||||
seq2  TCCATTCTTCTCTCCTTGTACTGAGGACAAATCTAAGTGGATCAGGGAAC  299

seq1  TTCACTTAAAACCAGATACACTGAAACTTATAGAGGAGAAAGTGGGGAAA  350
      ||||||||||||| ||||||| || |||||||||||||||||||||||||
seq2  TTCACTTAAAACCTGATACACCGACACTTATAGAGGAGAAAGTGGGGAAA  349

seq1  AGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAAT  399

seq1  GGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCC  449

seq1  AAAGTTTCTGCAAGGCAAAAGATACCGTCAATAAGACAAAAAGACCACCA  500
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAAGTTTCTGCAAGGCAAAAGATACCGTGAATAAGACAAAAAGACCACCA  499

seq1  ACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAAT  549

seq1  ATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATA  600
      ||||||||||||| |||||||||||||||||||||||  |||||||| ||
seq2  ATCCAACATATATGAAGAACTCAAGAAGGTGGACTTCTCAAAATCAACTA  599

seq1  ACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAATTCTCACCTGAG  650
      ||||| ||||||||||||||||  ||||||||| ||||||||||||||||
seq2  ACCCCTTTAAAAAATGGGGCTCGTAACTGAACACAGAATTCTCACCTGAG  649

seq1  GAATACCGAATGGCAGAGAAGCACCTGAAA  680
      ||||||||||||||| ||||||||||||||
seq2  GAATACCGAATGGCACAGAAGCACCTGAAA  679