BAC Information

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BAC

Clone NameB6Ng01-289B24
Chromosome5 (Build37)
Map Location 20,921,082 - 20,921,736
singlet/doubletsinglet
Overlap genenone
Upstream geneMagi2, LOC100041850, Phtf2, LOC622367, Tmem60, Rsbn1l, Ptpn12, EG626903, A530088I07Rik, Fgl2
Downstream geneAI847670, Fbxl13, LOC625004, LOC667253, Armc10, AB112350, Pmpcb, Dnajc2, Psmc2, Slc26a5, Reln, Dnaja1-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289B24.bB6Ng01-289B24.g
ACCGA086610GA086611
length983976
definitionB6Ng01-289B24.b B6Ng01-289B24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccaaatggctgagaagcacctaaagaaatg
tttaacatccttagtcatcagagaaatgcaaatcaaaacaatcccgagat
tccacctcacaccagtcagaatggctaaaataaaaaactcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcttccattgttggtg
ggattgcaagctggtacaaccactctggaaatcagtctgatgtttcctca
gaaaattgaacatagtactacctgaggacccacctataccactcctgggc
atatacccaaaagatgttccaacatataacaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgtggtgcatttacacaatg
gaatactattcagctattaaaaacaatgaattcatgaaattctttggcaa
atggatggaactagaaaatatcattttgagtgaggtaacccagtcacaaa
agaacacacatgctatgcactcactgataagtagatattagcccaaaagc
taggaatactcaagatacaatttacagagcacatgaagctcaagaagagg
gaagaccaaagtgtggatgctttggtccttcttgtaagggggaacagaat
attcacaggagtgtggagtagaaactgaagaaaagacccatccagagact
gctccatctgggaatctgtcccatatacagtcaccaaacccagaaatgtt
gtggatgtcaacaaatacctgctgacaggagcctgattagctgtctccta
agaggctctgccagagcctgaccaatacagatgtggatgtactcagccaa
acatggaactgattatggggtccccaatggaggagttggagaagggattg
aagagctgaaggggtttgcaaccccataggaga
gaattctttaaggtgtgatatgaggctattactaaaggagctttggaaac
tgtacagttgagaccagttggggatgcagaactcccaaaggagagtaggt
accatgccctcccaagactcagtcagatgttcgtctctggagagaccagt
gtggtcagaaacctaagaagatctcagaaaatggagagatctcccatgct
catggattggcagaattaacatagtaaagatggccatcctaccaaaggca
atctacagattcaatgcaatccacatcaaaatcccaacacacttcttcaa
agacatggaaagaaaaattctcaaattcatctggaaaggcaaaaaacccc
agatagcgaaaacaattcttaacaataaaaggacttctgggggaataacc
attcctgacctaaagctgtactacagagcaatagtgattaaaaactgtat
ggtagtagtacagacacagacatgttgatcaatgaatagaattgaagacc
agaaataaaaccacacactaacgcacacttgatctttgacaaagaagcta
aaaatatacaatggaaaaaaagaaagcatctttgataaatagtactggtc
taattggctgtctgtatgtagaagaatgaaaatagacccatatttgtcac
cttgcacaaagctcaagtccaagtggatcaaggacctcaatataaaacca
gatacactgaatccaatagaagagaaagtgggaaagagccttgaactcaa
tggcacagggggaaatttcctaaactccaatggctcacactctaagaaca
agaattgataaatgggtcctcatgaaactgtaaagtttctataaggcaaa
ggacatagttaataaggcaaatcagcaacctacagattgggaaaaaaatc
ttcactaaccccatatcccatagagggttaatatgtaaaatatataaaga
atcaaaagctacactcatcaaaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_20921082_20921736
seq2: B6Ng01-289B24.g_66_720

seq1  GAATTCTTTAAGGTGTGATATGAGGCTATTACTAAAGGAGCTTTGGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAGGTGTGATATGAGGCTATTACTAAAGGAGCTTTGGAAAC  50

seq1  TGTACAGTTGAGACCAGTTGGGGATGCAGAACTCCCAAAGGAGAGTAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGTTGAGACCAGTTGGGGATGCAGAACTCCCAAAGGAGAGTAGGT  100

seq1  ACCATGCCCTCCCAAGACTCAGTCAGATGTTCGTCTCTGGAGAGACCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGCCCTCCCAAGACTCAGTCAGATGTTCGTCTCTGGAGAGACCAGT  150

seq1  GTGGTCAGAAACCTAAGAAGATCTCAGAAAATGGAGAGATCTCCCATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCAGAAACCTAAGAAGATCTCAGAAAATGGAGAGATCTCCCATGCT  200

seq1  CATGGATTGGCAGAATTAACATAGTAAAGATGGCCATCCTACCAAAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGATTGGCAGAATTAACATAGTAAAGATGGCCATCCTACCAAAGGCA  250

seq1  ATCTACAGATTCAATGCAATCCACATCAAAATCCCAACACACTTCTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACAGATTCAATGCAATCCACATCAAAATCCCAACACACTTCTTCAA  300

seq1  AGACATGGAAAGAAAAATTCTCAAATTCATCTGGAAAGGCAAAAAACCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGGAAAGAAAAATTCTCAAATTCATCTGGAAAGGCAAAAAACCCC  350

seq1  AGATAGCGAAAACAATTCTTAACAATAAAAGGACTTCTGGGGGAATAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGCGAAAACAATTCTTAACAATAAAAGGACTTCTGGGGGAATAACC  400

seq1  ATTCCTGACCTAAAGCTGTACTACAGAGCAATAGTGATTAAAAACTGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGACCTAAAGCTGTACTACAGAGCAATAGTGATTAAAAACTGTAT  450

seq1  GGTAGTAGTACAGACACAGACATGTTGATCAATGAATAGAATTGAAGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTAGTACAGACACAGACATGTTGATCAATGAATAGAATTGAAGACC  500

seq1  AGAAATAAAACCACACACTAACGCACACTTGATCTTTGACAAAGAAGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAAAACCACACACTAACGCACACTTGATCTTTGACAAAGAAGCTA  550

seq1  AAAATATACAATGGAAAAAAAGAAAGCATCTTTGATAAATAGTACTGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATACAATGGAAAAAAAGAAAGCATCTTTGATAAATAGTACTGGTC  600

seq1  TAATTGGCTGTCTGTATGTAGAAGAATGAAAATAGACCCATATTTGTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGGCTGTCTGTATGTAGAAGAATGAAAATAGACCCATATTTGTCAC  650

seq1  CTTGC  655
      |||||
seq2  CTTGC  655