BAC Information

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BAC

Clone NameB6Ng01-290K07
Chromosome5 (Build37)
Map Location 63,719,123 - 63,719,871
singlet/doubletsinglet
Overlap genenone
Upstream geneCentd1
Downstream gene3110047P20Rik, LOC100042133, 0610040J01Rik, AA536743, LOC100041636, LOC100041646, Pgm1, Tbc1d1, Ppia-ps22
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290K07.bB6Ng01-290K07.g
ACCGA087734GA087735
length1,209750
definitionB6Ng01-290K07.b B6Ng01-290K07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaacacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatagattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagtgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgcctg
gtcctgggctttttttggctgggagactattgataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaaaag
aatgaatttatgaaattcctagccaaatggatggacctggagggcatcat
cctgagtgaggtaacacattcacaaaggaactcacacaatatgtactcac
tgataagtggatattagcccaaaacctaggatacgcaagatataagatac
aatttcctaaacacatgaaactcaagaaaaatgaagactgaagtgtggac
actatgcccctccttagaattgggaacaaaacacccatggaaggagttac
agagacaaagtttggagctgagatgaaaggatgggccatgtagagactgc
catatccagggatccaccccataatcagcacccaaatgctgacaccattg
catacactaacaagatttttatcgaaaggacccagatgtagctgttctcc
ttgtgagactatgccggggcctagcaaaacacagaagtggatgcttcaca
gtcagctattggaatggatcacaggctccgattggaggagctaagagaaa
agtagccaagcagctaagggaatctggcaacccttataagttggcactaa
tattatggactaaccagctacccgggactcttgtctcttagctgtaatat
gtatccaaggattggctaagtcgtcatcacttggagaagatagggcgctc
acctatggt

gaattcacagagatttcctcctgactgtttatgaccatttctactagaat
tcgtttgtgttgtttcaaaccctactctggtctaggaagttaatggcaag
gaacaaatgtaagtgttttgtctaatcatttagttcttggttcagatcta
ctataccctgcaggtgacaatcacactctaaatttacagttaaagtcctt
tccctttaacaaatctaagctaccatcattagagcccaagggttcttaac
tagagacctccctgaatcattttcctttcctcaatattcaagattcattc
ttcagtggtaagaaaacagcatgggagggctggagagatggatcagtggt
taagagcactgactgcttttccagaggttgctgacaggagcctgaaatag
ctgtcttcttagaagctctgccagagcctgacaaatacagaaatagatgt
tcacagccaactattggactgagcaccagatccccaatggaggagttaca
gaaaagactgaaggaactgaaagggtttgcaacctcataggaagaacaac
aatatgaaccaaccagactccaccccccaattttcccagggactaaacca
ccaaccaaagagtacacatggagggacccatggcttcagccacatatgta
gcaaggatggccttgttaggcatcagtgggaggagcggcccttggttctg
tgaaggctcaatgccccagtgtaggggaatttgagggtgggggaggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_63719123_63719871
seq2: B6Ng01-290K07.g_66_815

seq1  GAATTCACAGAGATTTCCTCCTGACTGTTTATGACCATTTCTACTAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGAGATTTCCTCCTGACTGTTTATGACCATTTCTACTAGAAT  50

seq1  TCGTTTGTGTTGTTTCAAACCCTACTCTGGTCTAGGAAGTTAATGGCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTGTGTTGTTTCAAACCCTACTCTGGTCTAGGAAGTTAATGGCAAG  100

seq1  GAACAAATGTAAGTGTTTTGTCTAATCATTTAGTTCTTGGTTCAGATCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAATGTAAGTGTTTTGTCTAATCATTTAGTTCTTGGTTCAGATCTA  150

seq1  CTATACCCTGCAGGTGACAATCACACTCTAAATTTACAGTTAAAGTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACCCTGCAGGTGACAATCACACTCTAAATTTACAGTTAAAGTCCTT  200

seq1  TCCCTTTAACAAATCTAAGCTACCATCATTAGAGCCCAAGGGTTCTTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTAACAAATCTAAGCTACCATCATTAGAGCCCAAGGGTTCTTAAC  250

seq1  TAGAGACCTCCCTGAATCATTTTCCTTTCCTCAATATTCAAGATTCATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGACCTCCCTGAATCATTTTCCTTTCCTCAATATTCAAGATTCATTC  300

seq1  TTCAGTGGTAAGAAAACAGCATGGGAGGGCTGGAGAGATGGATCAGTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGGTAAGAAAACAGCATGGGAGGGCTGGAGAGATGGATCAGTGGT  350

seq1  TAAGAGCACTGACTGCTTTTCCAGAGGTTGCTGACAGGAGCCTGAAATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGCACTGACTGCTTTTCCAGAGGTTGCTGACAGGAGCCTGAAATAG  400

seq1  CTGTCTTCTTAGAAGCTCTGCCAGAGCCTGACAAATACAGAAATAGATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTCTTAGAAGCTCTGCCAGAGCCTGACAAATACAGAAATAGATGT  450

seq1  TCACAGCCAACTATTGGACTGAGCACCAGATCCCCAATGGAGGAGTTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCCAACTATTGGACTGAGCACCAGATCCCCAATGGAGGAGTTACA  500

seq1  GAAAAGACTGAAGGAACTGAAAGGGTTTGCAACCTCATAGGAAGAACAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGACTGAAGGAACTGAAAGGGTTTGCAACCTCATAGGAAGAACAAC  550

seq1  AATATGAACCAACCAGACTCCACCCCCCAATTTTCCCAGGGACTAAACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAACCAACCAGACTCCACCCCCCAATTTTCCCAGGGACTAAACCA  600

seq1  CCAACCAAAGAGTACACATGGAGGGACCCATGGCTTCAGCCACATATGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCAAAGAGTACACATGGAGGGACCCATGGCTTCAGCCACATATGTA  650

seq1  GCAAGGATGGCCTTGTTAGGCATCAGTGGGAGGAGCGGCCCTTGGTTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGATGGCCTTGTTAGGCATCAGTGGGAGGAGCGGCCCTTGGTTCTG  700

seq1  TGAAGGCTCAATGCCCCAGTGTAGGGGAATTTGAGGGT-GGGGAGGTGGG  749
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGAAGGCTCAATGCCCCAGTGTAGGGGAATTTGAGGGTGGGGGAGGTGGG  750


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