BAC Information

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BAC

Clone NameB6Ng01-291M01
Chromosome5 (Build37)
Map Location 7,302,101 - 7,303,233
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041208, EG435830, LOC100042651
Downstream gene4921511H03Rik, LOC242823, LOC667767, EG546855, Steap4, Sri, LOC433840, Adam22
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291M01.bB6Ng01-291M01.g
ACCGA088561GA088562
length1,1971,117
definitionB6Ng01-291M01.b B6Ng01-291M01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcctgagttctttatatatgttggatattagtccc
ctatttgatttaggataggtaaagatcctttcccaatctgttggcggtct
ctttgtcttattgacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcgaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcaattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactcgatggttttagttcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttccgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtaggttgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcactccgagatagtttatattat
ttttgactattgagacggtgttgtttccctatttctttctcagtctgtta
tcttgtgtagagaacgcattgacttgtttgagtatttatatcagctattt
cacgaagctgtttatcagctagagttctctggtggattttaagttcccta
ttatacatcatttacatcgcaaaaggaattttggactcctcttatcatgt
acctggatctctgtggccatgcctgcctataactcaggaactatgtt

gaattcttttggcatccagctctggatggtgctgaagctctgttgtcatg
gagacctcacaccctgcttcctcctcccagttggctcagtggcctctgga
ttctcttctatgaggacactgtaaagctgcacaatcttgcttctcttccc
gagtgcatgattggtgaggtgcacttgtcccactgaactcatctacagat
ggggcaccttactccagagcttcaagatggtacagccagttggctgacac
tggccaagaaaaactgagcccatttaaatatctactcttgacgaaccact
cttaagtcatttcctcaggccacttacaactcttctttccatagatgtta
aatttacactctgaaatttagataccatgattgtaaatattatttttatt
gaggtcttttcatttgcacagactctcatttgcattagagccaaatggtt
agacccctgtaaacatacatagaaattaataatatatagactgaacaggt
tatatttaagatatatgtacatatgtgtacaaatatatgcatccagtaac
aatagtgggtaaaaaaggacatgaatttgaagggactcaaggagggggta
tgtggataaactcagagggaggaaaggtaagggaaaaatgttgcaatact
attttccttaaaaaattaaagtaactttaaacaggtaaaaagttccttat
tatctgggttaacttcttgtctatttctatttcaaacaatttttcttgcc
tttttaaatgactttaatttaatttaagcattcatttaattcaatttaaa
tgttaatttcaaattgtacttcttaccttacttaaaaaaattcttattta
gcctggtgtgatggcccacacatttaatcccagtacttgggaaactgagg
taagcagctctctgagttcaagggcagcttgatctacagagtgagtttca
ggacagcaagggctacacagagaaccctgtctaaatccaaagaaacattc
tgtatttcaaatgcatttggattctgattttcaccactctcatatcatct
ggatttctcttatcagatatatcacagaattataatgtattctatagaaa
tatcataggcctatgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_7302101_7303233
seq2: B6Ng01-291M01.g_65_1181 (reverse)

seq1  AACATAGCCCTATGAATTATTCTATAGGATTACATTTTATAATCTGTGAT  50
      ||||||| |||||| ||  ||||||| || |||||| || | ||||||||
seq2  AACATAGGCCTATG-ATATTTCTATA-GAATACATTATA-ATTCTGTGAT  47

seq1  TAATATCTGGAATAGAGAAATCCAGATGAATATGAAGAAGGTGGTGAAAA  100
        |||||| ||  ||||||||||||||| ||||| |||  ||||||||||
seq2  --ATATCT-GATAAGAGAAATCCAGATG-ATATG-AGA--GTGGTGAAAA  90

seq1  TCAAGAATTCCAAATGCATTTTGAAATACAGAATTGTTTCTTTGGATTTT  150
      || |||| |||||||||| |||||||||||||| |||||||||||| |||
seq2  TC-AGAA-TCCAAATGCA-TTTGAAATACAGAA-TGTTTCTTTGGA-TTT  135

seq1  AGACAGGGTTTCTCTGTGTAGCCCTTGCTGTCCTGAAACTCACTCTGTAG  200
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGG-TTCTCTGTGTAGCCCTTGCTGTCCTGAAACTCACTCTGTAG  184

seq1  ATCAAGCTGCCCTTGAACTCAGAGAGCTGCTTACCTCAGTTTCCCAAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGCTGCCCTTGAACTCAGAGAGCTGCTTACCTCAGTTTCCCAAGTA  234

seq1  CTGGGATTAAATGTGTGGGCCATCACACCAGGCTAAATAAGAATTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTAAATGTGTGGGCCATCACACCAGGCTAAATAAGAATTTTTTT  284

seq1  AAGTAAGGTAAGAAGTACAATTTGAAATTAACATTTAAATTGAATTAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGGTAAGAAGTACAATTTGAAATTAACATTTAAATTGAATTAAAT  334

seq1  GAATGCTTAAATTAAATTAAAGTCATTTAAAAAGGCAAGAAAAATTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTTAAATTAAATTAAAGTCATTTAAAAAGGCAAGAAAAATTGTTT  384

seq1  GAAATAGAAATAGACAAGAAGTTAACCCAGATAATAAGGAACTTTTTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGAAATAGACAAGAAGTTAACCCAGATAATAAGGAACTTTTTACC  434

seq1  TGTTTAAAGTTACTTTAATTTTTTAAGGAAAATAGTATTGCAACATTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAAGTTACTTTAATTTTTTAAGGAAAATAGTATTGCAACATTTTT  484

seq1  CCCTTACCTTTCCTCCCTCTGAGTTTATCCACATACCCCCTCCTTGAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTACCTTTCCTCCCTCTGAGTTTATCCACATACCCCCTCCTTGAGTC  534

seq1  CCTTCAAATTCATGTCCTTTTTTACCCACTATTGTTACTGGATGCATATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAAATTCATGTCCTTTTTTACCCACTATTGTTACTGGATGCATATA  584

seq1  TTTGTACACATATGTACATATATCTTAAATATAACCTGTTCAGTCTATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACACATATGTACATATATCTTAAATATAACCTGTTCAGTCTATAT  634

seq1  ATTATTAATTTCTATGTATGTTTACAGGGGTCTAACCATTTGGCTCTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAATTTCTATGTATGTTTACAGGGGTCTAACCATTTGGCTCTAAT  684

seq1  GCAAATGAGAGTCTGTGCAAATGAAAAGACCTCAATAAAAATAATATTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGAGAGTCTGTGCAAATGAAAAGACCTCAATAAAAATAATATTTA  734

seq1  CAATCATGGTATCTAAATTTCAGAGTGTAAATTTAACATCTATGGAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATGGTATCTAAATTTCAGAGTGTAAATTTAACATCTATGGAAAGA  784

seq1  AGAGTTGTAAGTGGCCTGAGGAAATGACTTAAGAGTGGTTCGTCAAGAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGTAAGTGGCCTGAGGAAATGACTTAAGAGTGGTTCGTCAAGAGT  834

seq1  AGATATTTAAATGGGCTCAGTTTTTCTTGGCCAGTGTCAGCCAACTGGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTAAATGGGCTCAGTTTTTCTTGGCCAGTGTCAGCCAACTGGCT  884

seq1  GTACCATCTTGAAGCTCTGGAGTAAGGTGCCCCATCTGTAGATGAGTTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATCTTGAAGCTCTGGAGTAAGGTGCCCCATCTGTAGATGAGTTCA  934

seq1  GTGGGACAAGTGCACCTCACCAATCATGCACTCGGGAAGAGAAGCAAGAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGACAAGTGCACCTCACCAATCATGCACTCGGGAAGAGAAGCAAGAT  984

seq1  TGTGCAGCTTTACAGTGTCCTCATAGAAGAGAATCCAGAGGCCACTGAGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGCTTTACAGTGTCCTCATAGAAGAGAATCCAGAGGCCACTGAGC  1034

seq1  CAACTGGGAGGAGGAAGCAGGGTGTGAGGTCTCCATGACAACAGAGCTTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGGGAGGAGGAAGCAGGGTGTGAGGTCTCCATGACAACAGAGCTTC  1084

seq1  AGCACCATCCAGAGCTGGATGCCAAAAGAATTC  1133
      |||||||||||||||||||||||||||||||||
seq2  AGCACCATCCAGAGCTGGATGCCAAAAGAATTC  1117


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