BAC Information

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BAC

Clone NameB6Ng01-292H06
Chromosome5 (Build37)
Map Location 83,125,765 - 83,126,906
singlet/doubletsinglet
Overlap genenone
Upstream geneLphn3, EG433912
Downstream geneLOC100039434, Srd5a2l2, LOC100039608
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292H06.bB6Ng01-292H06.g
ACCGA089089GA089090
length1,14465
definitionB6Ng01-292H06.b B6Ng01-292H06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctggttgcctttacattgtctgtcttatttatagtccttacttt
tctctatattcataattcccaggtctccttagtgccacgtaaattattca
gatattggtttttcttgtttctattgccccattttgaaggtgctgccaag
cttgaatgtgcacagaggagtgctcagataaagtaggaatttaagagcaa
tgagagtattgtctttctctactccaataagaacatttaagatgcaggtg
agatttctcttactcctttggctctgtttttattacaacatctttactca
aattggcaagtaggcaaagggctattccagtgtgaactttgtaccattaa
agaacaaggaatggtgataacaaactatggagctaaatgattttctttct
ctctgggtgtcagtttcacataaattgtgtctgttgtgaatcagctttgc
cattttgtagttttcaaagctttaaaatacaaaacagagagaacacaaat
ctatagcatatttattttggctagtctaatttgtaaggctattatattag
atttaaacaagcctccaagtagcttgaattttcacaaccatattattttt
atgtctaaggaaaaacaactactttctccttaaaaaaataagcacacata
aaatgattgacatcaagaaactaaattctaaaattaaaaatagaatacaa
taggatagaatagatacaaacatataaagtgaatcaatgcactttgagta
aaattattagttcattgaatattttgcagtgacaataggatgagtttaat
tttagtattattattcactataataatagtgatgttacttttattcactt
aaagaagcatacagtatgcatacaagcttcaatacccaaagtactttaga
tcttattaggcattaatttaggtcttagggaaagactaaaacaagctgag
gaggagggagactccataggaagaccagcagtctcaactaacctggaccc
caagatctttcagacacttgagccatcaccagcaacaatacaccagctga
atatgaggcccatgacacagtgaacaccgatcagcaaagattgccttggt
ggggccttcagtcaaaggagaagcaactaacccctcaaagaatt

cagggccaggaagcaggagtgggtgcattgaggagcagggtggggggagg
gtaaaggggtctttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_83125765_83126906
seq2: B6Ng01-292H06.b_47_1190 (reverse)

seq1  AATTCTTTTGAGGGTTAGGTGCTTCTCCTTTGACTG-AGGCCCCACC-AG  48
      ||||||||   ||||||| ||||||||||||||||| |||||||||| ||
seq2  AATTCTTTGAGGGGTTAGTTGCTTCTCCTTTGACTGAAGGCCCCACCAAG  50

seq1  GCAATTCTTTGCTGATCGGTG-TCACTGTGTCATGGGCCTCATA-TCAGC  96
      |||| |||||||||||||||| |||||||||||||||||||||| |||||
seq2  GCAA-TCTTTGCTGATCGGTGTTCACTGTGTCATGGGCCTCATATTCAGC  99

seq1  TGGTGTA-TGTTGCCTGGTTGATGGCTC-AGTGTCTGAAAGATCTTGGGG  144
      ||||||| ||||| |||| ||||||||| |||||||||||||||||||||
seq2  TGGTGTATTGTTG-CTGG-TGATGGCTCAAGTGTCTGAAAGATCTTGGGG  147

seq1  TCCAGGTTAGTTGAGACTGCTGGTCTTCCTATGGAGTCTCCCTCCTCCTC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTTAGTTGAGACTGCTGGTCTTCCTATGGAGTCTCCCTCCTCCTC  197

seq1  AGCTTGTTTTAGTCTTTCCCTAAGACCTAAATTAATGCCTAATAAGATCT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTTTTAGTCTTTCCCTAAGACCTAAATTAATGCCTAATAAGATCT  247

seq1  AAAGTACTTTGGGTATTGAAGCCTTGTATGCATACTGTATGCTTCTTTAA  294
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAAGTACTTTGGGTATTGAAG-CTTGTATGCATACTGTATGCTTCTTTAA  296

seq1  GTGAATAAAAGTAACATCACTATTATTATAGTGAATAATAATACTAAAAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATAAAAGTAACATCACTATTATTATAGTGAATAATAATACTAAAAT  346

seq1  TAAACTCATCCTATTGTCACTGCAAAATATTCAATGAACTAATAATTTTA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCATCCTATTGTCACTGCAAAATATTCAATGAACTAATAATTTTA  396

seq1  CTCAAAGTGCATTGATTCACTTTATATGTTTGTATCTATTCTATCCTATT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGTGCATTGATTCACTTTATATGTTTGTATCTATTCTATCCTATT  446

seq1  GTATTCTATTTTTAATTTTAGAATTTAGTTTCTTGATGTCAATCATTTTA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTATTTTTAATTTTAGAATTTAGTTTCTTGATGTCAATCATTTTA  496

seq1  TGTGTGCTTATTTTTTTAAGGAGAAAGTAGTTGTTTTTCCTTAGACATAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCTTATTTTTTTAAGGAGAAAGTAGTTGTTTTTCCTTAGACATAA  546

seq1  AAATAATATGGTTGTGAAAATTCAAGCTACTTGGAGGCTTGTTTAAATCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATATGGTTGTGAAAATTCAAGCTACTTGGAGGCTTGTTTAAATCT  596

seq1  AATATAATAGCCTTACAAATTAGACTAGCCAAAATAAATATGCTATAGAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAATAGCCTTACAAATTAGACTAGCCAAAATAAATATGCTATAGAT  646

seq1  TTGTGTTCTCTCTGTTTTGTATTTTAAAGCTTTGAAAACTACAAAATGGC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTCTCTCTGTTTTGTATTTTAAAGCTTTGAAAACTACAAAATGGC  696

seq1  AAAGCTGATTCACAACAGACACAATTTATGTGAAACTGACACCCAGAGAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGATTCACAACAGACACAATTTATGTGAAACTGACACCCAGAGAG  746

seq1  AAAGAAAATCATTTAGCTCCATAGTTTGTTATCACCATTCCTTGTTCTTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAATCATTTAGCTCCATAGTTTGTTATCACCATTCCTTGTTCTTT  796

seq1  AATGGTACAAAGTTCACACTGGAATAGCCCTTTGCCTACTTGCCAATTTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTACAAAGTTCACACTGGAATAGCCCTTTGCCTACTTGCCAATTTG  846

seq1  AGTAAAGATGTTGTAATAAAAACAGAGCCAAAGGAGTAAGAGAAATCTCA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGATGTTGTAATAAAAACAGAGCCAAAGGAGTAAGAGAAATCTCA  896

seq1  CCTGCATCTTAAATGTTCTTATTGGAGTAGAGAAAGACAATACTCTCATT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATCTTAAATGTTCTTATTGGAGTAGAGAAAGACAATACTCTCATT  946

seq1  GCTCTTAAATTCCTACTTTATCTGAGCACTCCTCTGTGCACATTCAAGCT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTAAATTCCTACTTTATCTGAGCACTCCTCTGTGCACATTCAAGCT  996

seq1  TGGCAGCACCTTCAAAATGGGGCAATAGAAACAAGAAAAACCAATATCTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCACCTTCAAAATGGGGCAATAGAAACAAGAAAAACCAATATCTG  1046

seq1  AATAATTTACGTGGCACTAAGGAGACCTGGGAATTATGAATATAGAGAAA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTACGTGGCACTAAGGAGACCTGGGAATTATGAATATAGAGAAA  1096

seq1  AGTAAGGACTATAAATAAGACAGACAATGTAAAGGCAACCAGGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGGACTATAAATAAGACAGACAATGTAAAGGCAACCAGGAATTC  1144


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