BAC Information

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BAC

Clone NameB6Ng01-293N13
Chromosome5 (Build37)
Map Location 79,752,159 - 79,753,286
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039398, Mthfr-ps1, EG384187
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293N13.bB6Ng01-293N13.g
ACCGA090126GA090127
length1,1681,146
definitionB6Ng01-293N13.b B6Ng01-293N13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatgtctaagatcaaaaactcaggtgacag
cagatgctggcgtggatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaactactctggaaatcagtctggcggttcctc
agaaaattggacatagtactaccggaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagatgctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
atactactcagctattaaaaagaatgaatttatgaaattcctaggcaaat
ggatggacctggagggcatcatcctgagtgaggtaacacattcacaaagg
aactcacacaatatgtactcactgataagtggatattagccccaaaccta
ggatacccaagatataagatacaatttgctaaacacatgaaactcaagaa
gaatgaagactgaagtgtggacactatgcccctccttagaattgggaaca
aaacacccatggaaggagttacagagacaaagtttggagctgagatgaaa
ggatggaccatgtagagactgccatatccagggatccaccccataatcag
catccaaacgctgacaccattgcatacactagcaagattttattgaaagg
acccagatgtagctgtctcttgtgagactatgccggggtctagcaaacac
agaagtggatgctcactgtcagctaatggatggatcacagggctcccaat
ggaggagctagagaaagtagccaaggagctaaagggatctgtacctatag
tggacacattatgaactaaccagtaccccggagcttctgactctagctgc
attatgtatcaaagatgacttagtcgggccatcactgtaaagaagaggtc
attgacttgtaatctttatatgcctcagtacaggacgtcaaggtaaaatg
gaaatgtggggggttgga

gaattctgttggtgatgatttcatctatagctctcgatttctttcctaag
ttgtccatcttcagtgttgcctccttctgtgttttctttattgcttctat
ttccatttttagttcttggatatttttgttaaattccttcacctgcttga
ttgtattttcctcttttgctttaagtgatttatttgtttcctctctaagc
tcttcttccaatttacctgtgttttcctgtgtttctttaagggagctctt
aaaaccctacttaaaggtttctattgtccttgtgagatgggattgttttt
atctgaatcttgcatttcaggcatgttgggggtaaccagggcttactatc
gtagcagatcctgcacctgcctctgtctatctggttatcattttaacttt
cctgactatctctgactacagcaggcctccttggaggcaggtagaggcag
tctgtttggaggtaggcagtgttgtctctggttagggtgggactcttttg
tttctggttagagcaggcctcctgtgtccctggttacttcagatattctg
ggagtttggcagaatgtgtccctggttattttgggccgcttgggaggcag
acaggctatggagtgtgttggggtgcttggccactgatttggcctggcta
aaaagcaggcaggaagaaggatagatctcagggtttgaggtgagggtgtt
gggccagctgacatgggtatttgggtgacattctcacctgtgtccatgac
tactggggaatcacacaggctgtaggtataggcaaagttgatttaatata
ttttaacttgataaattctagttcttccttttttgagatattagaacaca
ggatattatttattatgattcatatttgggttttatttatgtctatgcac
ctgtgttactgtatgccattcggtcttcacagatgctagaggagaatatc
agatttccctagactagacatgatcaaccttccgggaaacaaaataccaa
ccctctgaagagaaatgactgtttcgttacagctaagtcatatgctcagc
tggacatgagttcatggaatttaatttatcagactgcatgtttatagtat
gtggttaatacgtagcccttgaaacttcagtaatttggaatttcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_79752159_79753286
seq2: B6Ng01-293N13.g_69_1214

seq1  GAATTCTGTTGGTGATGATTTCATCTATAGCTCTCGATTTCTTTCCTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTGGTGATGATTTCATCTATAGCTCTCGATTTCTTTCCTAAG  50

seq1  TTGTCCATCTTCAGTGTTGCCTCCTTCTGTGTTTTCTTTATTGCTTCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCATCTTCAGTGTTGCCTCCTTCTGTGTTTTCTTTATTGCTTCTAT  100

seq1  TTCCATTTTTAGTTCTTGGATATTTTTGTTAAATTCCTTCACCTGCTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTTTAGTTCTTGGATATTTTTGTTAAATTCCTTCACCTGCTTGA  150

seq1  TTGTATTTTCCTCTTTTGCTTTAAGTGATTTATTTGTTTCCTCTCTAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTTCCTCTTTTGCTTTAAGTGATTTATTTGTTTCCTCTCTAAGC  200

seq1  TCTTCTTCCAATTTACCTGTGTTTTCCTGTGTTTCTTTAAGGGAGCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCCAATTTACCTGTGTTTTCCTGTGTTTCTTTAAGGGAGCTCTT  250

seq1  AAAACCCTACTTAAAGGTTTCTATTGTCCTTGTGAGATGGGATTGTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCTACTTAAAGGTTTCTATTGTCCTTGTGAGATGGGATTGTTTTT  300

seq1  ATCTGAATCTTGCATTTCAGGCATGTTGGGGGTAACCAGGGCTTACTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAATCTTGCATTTCAGGCATGTTGGGGGTAACCAGGGCTTACTATC  350

seq1  GTAGCAGATCCTGCACCTGCCTCTGTCTATCTGGTTATCATTTTAACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGATCCTGCACCTGCCTCTGTCTATCTGGTTATCATTTTAACTTT  400

seq1  CCTGACTATCTCTGACTACAGCAGGCCTCCTTGGAGGCAGGTAGAGGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTATCTCTGACTACAGCAGGCCTCCTTGGAGGCAGGTAGAGGCAG  450

seq1  TCTGTTTGGAGGTAGGCAGTGTTGTCTCTGGTTAGGGTGGGACTCTTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTGGAGGTAGGCAGTGTTGTCTCTGGTTAGGGTGGGACTCTTTTG  500

seq1  TTTCTGGTTAGAGCAGGCCTCCTGTGTCCCTGGTTACTTCAGATATTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGTTAGAGCAGGCCTCCTGTGTCCCTGGTTACTTCAGATATTCTG  550

seq1  GGAGTTTGGCAGAATGTGTCCCTGGTTATTTTGGGCCGCTTGGGAGGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTGGCAGAATGTGTCCCTGGTTATTTTGGGCCGCTTGGGAGGCAG  600

seq1  ACAGGCTATGGAGTGTGTTGGGGTGCTTGGCCACTGATTTGGCCTGGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTATGGAGTGTGTTGGGGTGCTTGGCCACTGATTTGGCCTGGCTA  650

seq1  AAAAGCAGGCAGGAAGAAGGATAGATCTCAGGGTTTGAGGTGAGGGTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGGCAGGAAGAAGGATAGATCTCAGGGTTTGAGGTGAGGGTGTT  700

seq1  GGGCCAGCTGACATGGGTATTTGGGTGACATTCTCACCTGTGTCCATGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGCTGACATGGGTATTTGGGTGACATTCTCACCTGTGTCCATGAC  750

seq1  TACTGGGGAATCACACAGGCTGTAGGTATAGGC-AAGTTGATTTAATATA  799
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TACTGGGGAATCACACAGGCTGTAGGTATAGGCAAAGTTGATTTAATATA  800

seq1  TTTTAACTTGATAAATTCTAGTTCTTCC-TTTTTGAGATATTAGAACACA  848
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTTAACTTGATAAATTCTAGTTCTTCCTTTTTTGAGATATTAGAACACA  850

seq1  GGATATTATTTATTATGATTCATATTT-GGTTTTATTTATGTCTATGCAC  897
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGATATTATTTATTATGATTCATATTTGGGTTTTATTTATGTCTATGCAC  900

seq1  CTGTGTTACTGTATGCCATTCGGTCTTCACAGATGCTAGAGGAGAATATC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTACTGTATGCCATTCGGTCTTCACAGATGCTAGAGGAGAATATC  950

seq1  AGA-TTCCCTAGGACTAGACATGATCAAACCTTCCGGGAAAC-AAATACC  995
      ||| ||||||| |||||||||||||| ||||||||||||||| |||||||
seq2  AGATTTCCCTA-GACTAGACATGATC-AACCTTCCGGGAAACAAAATACC  998

seq1  AACCCTCTTGAAGAGAAATGACTG-TTCGTAACAGCTAAGTCATATGCTC  1044
      ||||||| |||||||||||||||| ||||| |||||||||||||||||||
seq2  AACCCTC-TGAAGAGAAATGACTGTTTCGTTACAGCTAAGTCATATGCTC  1047

seq1  AGCT-GACATGAGTTCATTGAATTTATTTATTCAGACTGAATGTTTATAG  1093
      |||| ||||||||||||| ||||||| ||  |||||||| ||||||||||
seq2  AGCTGGACATGAGTTCATGGAATTTAATTTATCAGACTGCATGTTTATAG  1097

seq1  TATGTGTTAAATTACTTAGCCCTTGA---------------TAATTTCAT  1128
      |||||| | || ||| ||||||||||                ||||||||
seq2  TATGTGGTTAA-TACGTAGCCCTTGAAACTTCAGTAATTTGGAATTTCAT  1146


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