BAC Information

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BAC

Clone NameB6Ng01-294O14
Chromosome5 (Build37)
Map Location 63,552,523 - 63,553,679
singlet/doubletsinglet
Overlap genenone
Upstream geneCentd1
Downstream gene3110047P20Rik, LOC100042133, 0610040J01Rik, AA536743, LOC100041636, LOC100041646, Pgm1, Tbc1d1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294O14.bB6Ng01-294O14.g
ACCGA090915GA090916
length9651,172
definitionB6Ng01-294O14.b B6Ng01-294O14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctcactattattgtgtgaggtacaatgtgtgctttgagcttta
ctacagtttctttaatgaatgtggctgcccttgcatttggagcatagata
ttcagaattgagagttcatcttggtagattttatctttgatgagtatgaa
gtgcccctccttgtcttttttgataactttgggttgtaagtcaattttat
tcaatattagaatgactactcaagcttctttctttctttgggaccatttg
cttggaaaaatgttttcctgcatttcactctgaggtagtgtctgtccttt
tctgtgaggagggtttcctgtaagcagcaaaatgttgggtcctgtttgtg
tagccaatctattagtctatgtctttttattgggggaattgagtccattg
atgttaagagaaattaaagaaaagtaattgttgcttcctgtcatttttgt
tgttaaagttgggattctgttcatgcgactgtgttcttttaggtctgttg
aaagattactttcttgctttttctagggagtagtttccatctttgtgttg
gtgttttccctttattaccctttgaagggctggatttgtggaaagatatt
gtgtgaatttggttttgtcatggaatactttggtttctccatctatggta
attgagagctttgctgggtataatagcctgggctggcatttgtgttctct
taggatctgtataacaactgtccaggatcttctggctttcatagtctttg
gtgagaagtctagtattattctaataggcctaaatttacatgttacttga
tctttttcccttactgattttaatattctatctttatttagtgcatttat
tgttctgattattatttgtccagaggaatttcttttctggtccagtctat
ttgggagttctgtaggcttcttattatgttcatgggcatctctttcttta
ggtttgggagttttc

gaattctcctgaggactagggggaaaggcagtgtaggtgccagaatcctt
ccctggcaggctggatattgaagtccaatccatcagagtttcatgaacgt
tcataccccaggagagtgaagttgttcatatacaatgtgttttcccttgt
tgttgttcagtaaatttgaataatgatcattatgaatatatgtgaaatgg
aaatgatatattcatctttaaacatgagcaaaattcttaccagattccta
aactcaaaagtagattttttaatagaaatttctagtgtgaaactaggtca
tttgcatacttctttgacttacatacctaattgccagagaatttgcattt
tcctgtctgattttgcaccacatctaagtcatctacatatttcagttaat
ctacttgctgaagatgggtaagatttcctacccataattggaataaactt
cagtttcattgcacttcaactagagacttttatagaatataaaccaaaat
attttcagagttaacgcctatatctcttatcaatcttttttataacaagt
atgatgttgttcgcaatgtgcataagactatacaaagtggattaatagtt
aatagtgaaaatatcttaatttcacatttatacacaggctcagaatgagg
aaacatgatttataaatttggaagcattttaacctagatattagcaccaa
tgagcaatgcattatctttcagttcccataatatatcccctttaagttaa
ctttgacagtaaccctctaaatatagaaatttgaaagagtaatattgtga
gattttcaagaggttttcagtatatgtaattaacattccacaaatgctca
aaccaggttctttggaatccagagcctttgtgtgtgaatgtcaataaaaa
taatattaaatgaacatgatgtttctgttacctcctgctcatttgaggct
acttttgaaggacttggcatagctgtgtgtgtttgcaacacttgtggtgt
ggtggacagagtcagaggcagatgtgtgggtgccttgcttctatccactc
ctcccttattcctcctctgccaacaggtctgttaacagacaccctaggta
agtattaagcaattgttctatgtttgcaaggtgccatcacccctggctgg
aaattctttgcagctactgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_63552523_63553679
seq2: B6Ng01-294O14.g_66_1237 (reverse)

seq1  ACTCAGTAGCTGCAAAGATATCTCAGC---AGGTGATTGCA-CTTGC-AA  45
      ||||||||||||||||||  |  ||||    |||||| ||| ||||| ||
seq2  ACTCAGTAGCTGCAAAGAATTTCCAGCCAGGGGTGATGGCACCTTGCAAA  50

seq1  CATAG-ACA--TGC-TAATACTAACCTA-GGTGTCCTGTAACAGACCCTG  90
      ||||| |||  ||| ||||||| ||||| ||||||   ||||||| ||||
seq2  CATAGAACAATTGCTTAATACTTACCTAGGGTGTCTGTTAACAGA-CCTG  99

seq1  TT-GCAGAG--AGAATAAGGGAGAAGT-GATAG-AGCAAGGCA-CCACAC  134
      || ||||||   ||||||||||| ||| ||||| ||||||||| ||||||
seq2  TTGGCAGAGGAGGAATAAGGGAGGAGTGGATAGAAGCAAGGCACCCACAC  149

seq1  ATCTGCCTCTGACCTCTGTCCA-CACA-CACAAGTG-TGCAAACACACCA  181
      |||||||||||| ||||||||| |||| |||||||| |||||||||| ||
seq2  ATCTGCCTCTGA-CTCTGTCCACCACACCACAAGTGTTGCAAACACA-CA  197

seq1  CAGCTATTGCCAAGTCCTTCAAAAGTAGCCTCAAATGAGCAGGAGGTAAC  231
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTA-TGCCAAGTCCTTCAAAAGTAGCCTCAAATGAGCAGGAGGTAAC  246

seq1  AGAAACATCATGTTCATTTAATATTATTTTTATTGACATTCACACACAAA  281
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACATCATGTTCATTTAATATTATTTTTATTGACATTCACACACAAA  296

seq1  GGCTCTGGATTCCAAAGAACCTGGTTTGAGCATTTGTGGAATGTTAATTA  331
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGGATTCCAAAGAACCTGGTTTGAGCATTTGTGGAATGTTAATTA  346

seq1  CATATACTGAAAACCTCTTGAAAATCTCACAATATTACTCTTTCAAATTT  381
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACTGAAAACCTCTTGAAAATCTCACAATATTACTCTTTCAAATTT  396

seq1  CTATATTTAGAGGGTTACTGTCAAAGTTAACTTAAAGGGGATATATTATG  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTTAGAGGGTTACTGTCAAAGTTAACTTAAAGGGGATATATTATG  446

seq1  GGAACTGAAAGATAATGCATTGCTCATTGGTGCTAATATCTAGGTTAAAA  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGAAAGATAATGCATTGCTCATTGGTGCTAATATCTAGGTTAAAA  496

seq1  TGCTTCCAAATTTATAAATCATGTTTCCTCATTCTGAGCCTGTGTATAAA  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCAAATTTATAAATCATGTTTCCTCATTCTGAGCCTGTGTATAAA  546

seq1  TGTGAAATTAAGATATTTTCACTATTAACTATTAATCCACTTTGTATAGT  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAATTAAGATATTTTCACTATTAACTATTAATCCACTTTGTATAGT  596

seq1  CTTATGCACATTGCGAACAACATCATACTTGTTATAAAAAAGATTGATAA  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGCACATTGCGAACAACATCATACTTGTTATAAAAAAGATTGATAA  646

seq1  GAGATATAGGCGTTAACTCTGAAAATATTTTGGTTTATATTCTATAAAAG  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATATAGGCGTTAACTCTGAAAATATTTTGGTTTATATTCTATAAAAG  696

seq1  TCTCTAGTTGAAGTGCAATGAAACTGAAGTTTATTCCAATTATGGGTAGG  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGTTGAAGTGCAATGAAACTGAAGTTTATTCCAATTATGGGTAGG  746

seq1  AAATCTTACCCATCTTCAGCAAGTAGATTAACTGAAATATGTAGATGACT  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTACCCATCTTCAGCAAGTAGATTAACTGAAATATGTAGATGACT  796

seq1  TAGATGTGGTGCAAAATCAGACAGGAAAATGCAAATTCTCTGGCAATTAG  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTGGTGCAAAATCAGACAGGAAAATGCAAATTCTCTGGCAATTAG  846

seq1  GTATGTAAGTCAAAGAAGTATGCAAATGACCTAGTTTCACACTAGAAATT  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTAAGTCAAAGAAGTATGCAAATGACCTAGTTTCACACTAGAAATT  896

seq1  TCTATTAAAAAATCTACTTTTGAGTTTAGGAATCTGGTAAGAATTTTGCT  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTAAAAAATCTACTTTTGAGTTTAGGAATCTGGTAAGAATTTTGCT  946

seq1  CATGTTTAAAGATGAATATATCATTTCCATTTCACATATATTCATAATGA  981
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTAAAGATGAATATATCATTTCCATTTCACATATATTCATAATGA  996

seq1  TCATTATTCAAATTTACTGAACAACAACAAGGGAAAACACATTGTATATG  1031
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATTCAAATTTACTGAACAACAACAAGGGAAAACACATTGTATATG  1046

seq1  AACAACTTCACTCTCCTGGGGTATGAACGTTCATGAAACTCTGATGGATT  1081
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTTCACTCTCCTGGGGTATGAACGTTCATGAAACTCTGATGGATT  1096

seq1  GGACTTCAATATCCAGCCTGCCAGGGAAGGATTCTGGCACCTACACTGCC  1131
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTCAATATCCAGCCTGCCAGGGAAGGATTCTGGCACCTACACTGCC  1146

seq1  TTTCCCCCTAGTCCTCAGGAGAATTC  1157
      ||||||||||||||||||||||||||
seq2  TTTCCCCCTAGTCCTCAGGAGAATTC  1172


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