BAC Information

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BAC

Clone NameB6Ng01-296L10
Chromosome5 (Build37)
Map Location 90,331,623 - 90,481,584
singlet/doubletdoublet
Overlap genenone
Upstream geneSlc4a4, Gc, LOC622870, Npffr2, LOC631105, Adamts3
Downstream geneEG665733, Cox18, Ankrd17, Alb1, Afp, Afm, LOC100040105, LOC622307, Rassf6, Cxcl5, Ppbp, Cxcl4, Gm1960, Cxcl15, Cxcl1, Cxcl2, 1110019K23Rik, Epgn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296L10.bB6Ng01-296L10.g
ACCGA092251GA092252
length1,017975
definitionB6Ng01-296L10.b B6Ng01-296L10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,481,031 - 90,481,584)(90,331,623 - 90,332,562)
sequence
gaattccctatgtgaatgtaatgtactttgatcacagagactggggcaga
taaataacccagaatttatctccatttgatagccgcttgcaaatgaaaac
agagactcactggagaaacaaaccatacttaagggtaggctgcatgccca
gcctagatgaccaacacaaaactaactcaacagcatccttggaggttctt
tgtcttataatgtcaaacattaaaaaaaaaaataacaaaaaaaaaaaccc
caaaactttatagggcctttgcatatgtatcatgtcttttatttttgtgc
ttctatgggctttctgcatgtgcaaatgtgtgtttctgtgtttctgtgta
ttccttgtgcttttggctctttctcatgtttggcagttttgtcatattca
aattcgtttgttttttgttttgttttatcttattttattgtattattatt
cctttgattcctattttctaatgagaggcagagaagtgtggagccatcag
ggaagggagatggggaggaactgggaaaagtaaagagaggggaaatataa
ttggaatatactgtatgaaaatatctatcattaataaaaggaaaaatatg
tgaacagtgttgttccctcgatttcttcctcagtctgtttaccctttgtc
tataggaagcctactgttttttgtgtgttaattttgtattttgctactat
aaattctttttgataaatgtggttattagccatagaaatttcctggtgaa
ggttttggggtcctttatatagaaaatagcatcatctgcaaataaagata
ctttgacttctttcttttctgttctttagacttatttatttcatgtgcat
ctgtattttgcctgtaggtattcctgcatgagggtgtcacatccccttgt
attgaagttacagacagttgtggcctgccatgttggtggtgggaattgaa
ttcaggtcctctggagagcagcaagtgcttttaactgctgaagtcatctc
tcagcccctgtctgttt
gaattccagcactgaaaagtgagacatggacacgggcttctcacccctaa
cttagaagctatttgccattgatatctgctcggaaggaagctggtgtaac
acaaggagcattaatcacgcctcagacagacccatgcatgagaaggtggt
caacagaaaacaaactccatgaatttgtttgtgtggtctttgtttaaatt
cgagattgtgtgtgtgtgtgtgtgtgtttacctttggcttctttgttttg
atttggggaggggatattttgttttgttctgaacaagaaaaaaaaaaaag
aaaaagaacataaaattgggttgggagggaaatggggagaatctagaagg
atttaaaggagggagaaacaagatcaaaatacattgtgtgaaaattttta
aataaaataaagaaaaggggaaccccaaaggccaaggcatgaacttggaa
gtttgaggccagttggggtactgactgagttccaggccagcttgtcatga
ggccccttctcaagcatacaaaatttaaaacaacaaataaaagaaacaga
aaaaaaaatagaggaaagcacaaatgtgaccacctagagttttaaagaag
agcaggaggagccaaaggccagcaactgcagggaagcggctagcgcattc
cgagagcagtgtctaatgcatacttgcctttattgaaagagtgaatcaag
ttttgtctctaatatagaagattttgcaaatgaaaatatagcatagaaaa
ggggaattcatactgtttttccttgctgaataggaaaaacctttatcttt
ctaatgctgttttaaaaaagcccttagctcccacttatgagggtatctca
acaccatgctgaaatttttcctccctctgtgatatgcttcttgaagccag
atgcaaacatatttatccctttgggacccaggcttggttttcccagaacc
caccaccactggggaaatcacaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_90481031_90481584
seq2: B6Ng01-296L10.b_48_601 (reverse)

seq1  CCAATTATATTTCCCCTCTCTTTACTTTTCCCAGTTCCTCCCCATCTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTATATTTCCCCTCTCTTTACTTTTCCCAGTTCCTCCCCATCTCCC  50

seq1  TTCCCTGATGGCTCCACACTTCTCTGCCTCTCATTAGAAAATAGGAATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGATGGCTCCACACTTCTCTGCCTCTCATTAGAAAATAGGAATCA  100

seq1  AAGGAATAATAATACAATAAAATAAGATAAAACAAAACAAAAAACAAACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATAATAATACAATAAAATAAGATAAAACAAAACAAAAAACAAACG  150

seq1  AATTTGAATATGACAAAACTGCCAAACATGAGAAAGAGCCAAAAGCACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGAATATGACAAAACTGCCAAACATGAGAAAGAGCCAAAAGCACAA  200

seq1  GGAATACACAGAAACACAGAAACACACATTTGCACATGCAGAAAGCCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATACACAGAAACACAGAAACACACATTTGCACATGCAGAAAGCCCAT  250

seq1  AGAAGCACAAAAATAAAAGACATGATACATATGCAAAGGCCCTATAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCACAAAAATAAAAGACATGATACATATGCAAAGGCCCTATAAAGT  300

seq1  TTTGGGGTTTTTTTTTTTGTTATTTTTTTTTTTAATGTTTGACATTATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGTTTTTTTTTTTGTTATTTTTTTTTTTAATGTTTGACATTATAA  350

seq1  GACAAAGAACCTCCAAGGATGCTGTTGAGTTAGTTTTGTGTTGGTCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGAACCTCCAAGGATGCTGTTGAGTTAGTTTTGTGTTGGTCATCT  400

seq1  AGGCTGGGCATGCAGCCTACCCTTAAGTATGGTTTGTTTCTCCAGTGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGGCATGCAGCCTACCCTTAAGTATGGTTTGTTTCTCCAGTGAGT  450

seq1  CTCTGTTTTCATTTGCAAGCGGCTATCAAATGGAGATAAATTCTGGGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTTTCATTTGCAAGCGGCTATCAAATGGAGATAAATTCTGGGTTA  500

seq1  TTTATCTGCCCCAGTCTCTGTGATCAAAGTACATTACATTCACATAGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTGCCCCAGTCTCTGTGATCAAAGTACATTACATTCACATAGGGA  550

seq1  ATTC  554
      ||||
seq2  ATTC  554

seq1: chr5_90331623_90332562
seq2: B6Ng01-296L10.g_69_1015

seq1  GAATTCCAGCACTGAAAAGTGAGACATGGACACGGGCTTCTCACCCCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCACTGAAAAGTGAGACATGGACACGGGCTTCTCACCCCTAA  50

seq1  CTTAGAAGCTATTTGCCATTGATATCTGCTCGGAAGGAAGCTGGTGTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAAGCTATTTGCCATTGATATCTGCTCGGAAGGAAGCTGGTGTAAC  100

seq1  ACAAGGAGCATTAATCACGCCTCAGACAGACCCATGCATGAGAAGGTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAGCATTAATCACGCCTCAGACAGACCCATGCATGAGAAGGTGGT  150

seq1  CAACAGAAAACAAACTCCATGAATTTGTTTGTGTGGTCTTTGTTTAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAAAACAAACTCCATGAATTTGTTTGTGTGGTCTTTGTTTAAATT  200

seq1  CGAGATTGTGTGTGTGTGTGTGTGTGTTTACCTTTGGCTTCTTTGTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGATTGTGTGTGTGTGTGTGTGTGTTTACCTTTGGCTTCTTTGTTTTG  250

seq1  ATTTGGGGAGGGGATATTTTGTTTTGTTCTGAACAAGAAAAAAAAAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGGAGGGGATATTTTGTTTTGTTCTGAACAAGAAAAAAAAAAAAG  300

seq1  AAAAAGAACATAAAATTGGGTTGGGAGGGAAATGGGGAGAATCTAGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAACATAAAATTGGGTTGGGAGGGAAATGGGGAGAATCTAGAAGG  350

seq1  ATTTAAAGGAGGGAGAAACAAGATCAAAATACATTGTGTGAAAATTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAGGAGGGAGAAACAAGATCAAAATACATTGTGTGAAAATTTTTA  400

seq1  AATAAAATAAAGAAAAGGGGAACCCCAAAGGCCAAGGCATGAACTTGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATAAAGAAAAGGGGAACCCCAAAGGCCAAGGCATGAACTTGGAA  450

seq1  GTTTGAGGCCAGTTGGGGTACTGACTGAGTTCCAGGCCAGCTTGTCATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGGCCAGTTGGGGTACTGACTGAGTTCCAGGCCAGCTTGTCATGA  500

seq1  GGCCCCTTCTCAAGCATACAAAATTTAAAACAACAAATAAAAGAAACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCTTCTCAAGCATACAAAATTTAAAACAACAAATAAAAGAAACAGA  550

seq1  AAAAAAAATAGAGGAAAGCACAAATGTGACCACCTAGAGTTTTAAAGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATAGAGGAAAGCACAAATGTGACCACCTAGAGTTTTAAAGAAG  600

seq1  AGCAGGAGGAGCCAAAGGCCAGCAACTGCAGGGAAGCGGCTAGCGCATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAGGAGCCAAAGGCCAGCAACTGCAGGGAAGCGGCTAGCGCATTC  650

seq1  CGAGAGCAGTGTCTAATGCATACTTGCC-TTATTGAAAGAGTGAATCAAG  699
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CGAGAGCAGTGTCTAATGCATACTTGCCTTTATTGAAAGAGTGAATCAAG  700

seq1  TTTTGTCTCTAATATAGAAGA-TTTGCAAATGAAAATATAGCATAGAAAA  748
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTTGTCTCTAATATAGAAGATTTTGCAAATGAAAATATAGCATAGAAAA  750

seq1  GGGGAATTCATACTGTTTTTCCTTGCTGAATAGGAAAAACCTTTATCTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAATTCATACTGTTTTTCCTTGCTGAATAGGAAAAACCTTTATCTTT  800

seq1  CTAATGCTGTTTT-AAAAAGCCCTTAGCTCCCACTTATGAGGGTATCTCA  847
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTAATGCTGTTTTAAAAAAGCCCTTAGCTCCCACTTATGAGGGTATCTCA  850

seq1  ACACCATGCTGAAA-TTTTCCTCCCTCTGTGATATGCTTC-TGAAGCCAG  895
      |||||||||||||| ||||||||||||||||||||||||| |||||||||
seq2  ACACCATGCTGAAATTTTTCCTCCCTCTGTGATATGCTTCTTGAAGCCAG  900

seq1  ATGCAAACATATTTAATCCTTT-GGACCCAGGCTTGG-TTTCCCAGA  940
      |||||||||||||||  ||||| |||||||||||||| |||||||||
seq2  ATGCAAACATATTTATCCCTTTGGGACCCAGGCTTGGTTTTCCCAGA  947