BAC Information

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BAC

Clone NameB6Ng01-296N01
Chromosome5 (Build37)
Map Location 85,355,156 - 85,355,725
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha5, LOC100039489
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296N01.bB6Ng01-296N01.g
ACCGA092329GA092330
length532565
definitionB6Ng01-296N01.b B6Ng01-296N01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
agtaatatgtatctgactgatttttaagagttttggcttagtaacctgac
ccatctggggatccaacctatctgtagacaccaaacccagacactagtgc
tgatgtcaagaagcgctttctgacaggagcctggtatggttgtcccctga
gaggctctgccaaagcatgaccaacacagatgtggatagtcacagccaac
cattggactgagcacgggtataccaatggaggagttaggggaaggactga
aaaagatgaaggtgtttgcaaccccataggaagaacaacagcaaccaaac
agacttcccccaccccatactcccgctccgtctgccagagctcccaggaa
ctaaaccaccaaccaaagagtatccatggagggacccatggcttcaactg
attatgtaacagaggattgccttatctgtcatcagtgggaggggaggccc
ttgatcctgtggagactcaatgccccaaagtagagaaatgttaggtgagt
gaggcaggtgtcaaagggtgggtggggagttc

aggatatattgcatgagaaaataatactttttattataaaaggagaaata
tacacatatacttgttaataaaatatacttgttataaaagaatataaaaa
caaacaaacagctaggacaaaataaataaacaaacaaaaaaccaactaga
aaagtaaagaacagtaaacattaatacaaacacacatattgtcacacatg
gaaattccataaaaacagaaactcagtaaccattatagaaggaaaggtac
tgcatgataagaaaaatattcagtcgaagcataagacaaaatgagctgca
acactaccactcagtttattttgtagtgaccatcaacttaaagtcatgga
gcctgaccttaagtgtggcttatatatctagtgacactccattggagaaa
actaagttttaatttggctagtgggtctaaaatagagatatgtgaggagt
tagggatggtggtttgtattcatttccactctcaacacaggaaacccatc
tgactcaaacctcttctggttcttgagcattctgtcacagtctgtaaatt
tatatgtccttcaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_85355156_85355725
seq2: B6Ng01-296N01.g_69_639

seq1  GAATTCAGGATATATTGCATGAGAAAATAATACTTTTTATTATAAAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGATATATTGCATGAGAAAATAATACTTTTTATTATAAAAGGA  50

seq1  GAAATATACACATATACTTGTTAATAAAATATACTTGTTATAAAAGAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATACACATATACTTGTTAATAAAATATACTTGTTATAAAAGAATA  100

seq1  TAAAAACAAACAAACAGCTAGGACAAAATAAATAAACAAACAAAAAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACAAACAAACAGCTAGGACAAAATAAATAAACAAACAAAAAACCA  150

seq1  ACTAGAAAAGTAAAGAACAGTAAACATTAATACAAACACACATATTGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAAAAGTAAAGAACAGTAAACATTAATACAAACACACATATTGTCA  200

seq1  CACATGGAAATTCCATAAAAACAGAAACTCAGTAACCATTATAGAAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGAAATTCCATAAAAACAGAAACTCAGTAACCATTATAGAAGGAA  250

seq1  AGGTACTGCATGATAAGAAAAATATTCAGTCGAAGCATAAGACAAAATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACTGCATGATAAGAAAAATATTCAGTCGAAGCATAAGACAAAATGA  300

seq1  GCTGCAACACTACCACTCAGTTTATTTTGTAGTGACCATCAACTTAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAACACTACCACTCAGTTTATTTTGTAGTGACCATCAACTTAAAGT  350

seq1  CATGGAGCCTGACCTTAAGTGTGGCTTATATATCTAGTGACACTCCATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGCCTGACCTTAAGTGTGGCTTATATATCTAGTGACACTCCATTG  400

seq1  GAGAAAACTAAGTTTTAATTTGGCTAGTGGGTCTAAAATAGAGATATGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAACTAAGTTTTAATTTGGCTAGTGGGTCTAAAATAGAGATATGTG  450

seq1  AGGAGTTAGGGATGGTGGTTTGTATTCATTTCCACTCTCAACACAGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTAGGGATGGTGGTTTGTATTCATTTCCACTCTCAACACAGGAAA  500

seq1  CCCATCTGACTCAAACCTCTTCAGGTTC-TGAGCATTCTGTCACAGTCTG  549
      |||||||||||||||||||||| ||||| |||||||||||||||||||||
seq2  CCCATCTGACTCAAACCTCTTCTGGTTCTTGAGCATTCTGTCACAGTCTG  550

seq1  TAAATTTATATGTCCATCAAT  570
      ||||||||||||||| |||||
seq2  TAAATTTATATGTCCTTCAAT  571


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