BAC Information

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BAC

Clone NameB6Ng01-298F09
Chromosome5 (Build37)
Map Location 14,920,252 - 14,921,086
singlet/doubletsinglet
Overlap genenone
Upstream geneSema3e, LOC100042957, Pclo, ENSMUSG00000033219
Downstream geneLOC624245, Speer8-ps1, Speer4c, Speer4d, 4930572O03Rik, Speer7-ps1, 4930519H02Rik, LOC100041781, Cacna2d1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298F09.bB6Ng01-298F09.g
ACCGA093470GA093471
length1,200947
definitionB6Ng01-298F09.b B6Ng01-298F09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccatttttaatggggttatttgattt
tctggattccaccttcttgagttctttatatatattggatattagtcccc
tatccgatttgtgataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacggtgtctgttgccttgcagaaactttggagtttcat
taggtcccatttgtcaattctcgatcttactgcacaagccattgctgttc
aggaacttttcccctgtacccatatcttcaaggcttctccctactttctc
ctctataagtttcagtgtctctggttttatgtggagttccttaatcgaca
tagatttggccttagtacaaggagataggaatggatcaattcgcaatctt
ctacatgataaccactagttgttccagcaccatttgttgaaaatgctgtc
tttttttccactggatggtattagctcccttgtcaaagatcaaatgacca
taggtgtgtgggttcatctctgggtcttcaattctgctccattggtctgg
tctgcttgtctgtcactataccagtaccatgcagtttttatcacaattgc
tctgtagtacagcttaagtctggcatggtgattccaccagaggttctttt
atccttgagaagactttttgctatcctaggttttttgttattccagatga
atttgcagattgctctttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgatatcttctttaatttctttcttcagagacttgaagttcttttttttt
tcccacccactccccctttttggcactgggcgtttcccctgtcctgggca
tacaaagtttgccgtgtccaatgggcctctcttttccagtgatggccgac
tagggccatctttttgatacatatgcagctagagtcaggagcttccgggt
actggatagtcataatgtggtcaaccctatagggtgcagatccttagctc
ctttgggatctttctctagctcttcattggggagctggaatccatcatta
gctgactgtgagccatcccacatttcgtgagtttggcgtcatgagccgcg

gaattcagtgtttctgtggtttgtttggtgacccttggacagaaactctt
ccattcagcagcacataggacactgagccaaggtgaagaatggtgatatc
ttgccatgaaatatgtgacaaggggggaggagaatttatcccttatgata
aggatcaggggtggcttggtgctttttaggtttctatttgccatgtgcaa
cagcttcaagagcccatttctgatgtccttggaatcattatgttcccatg
atgatgcactcaggcatgcctggaaataagcagaacacttgccagagagc
ttgatttctataagggagggaatattgctaatttatgcagcaggatattt
ggtcacattgtaaaccccaagactgtgttgattccaaaaaaataaaaata
ataaaaaaataaaaaaaatttatggtgtagctcagccctagcacagacct
gtaacccaagagctttctgttcagtgtacatttctgacctgtggctcagc
cctatcacacacatttattgcaaagcaaaataaagtcaactccaggtcaa
gagttagagcaattaaccagttgaatgagaatgaatataactaaagagaa
ggaaggtctttttttcttttttgtttttttgttttttctttttccttttt
tcttttttcttttgttctttttagacagggtttctctgtatagccctggc
tgtcctggaacttactctgtagaccaggatgtcctcaaactcagaaatct
gcctgcctctgcctcccaagtgctgggattaaaggcatgcaccaccactg
tcccgcctcagaaagaaggtctttaagtttgaaggatatttaagacagtg
tggagagggataaagaatgcgttccttctggaggtcatcagggtaggaag
gtcagctgggtgctttccctgactctctgagctggctgctgagtctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_14920252_14921086
seq2: B6Ng01-298F09.g_70_903

seq1  AATTCAGTGTTTCTGTGGTTTGTTTGGTGACCCTTGGACAGAAACTCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGTGTTTCTGTGGTTTGTTTGGTGACCCTTGGACAGAAACTCTTC  50

seq1  CATTCAGCAGCACATAGGACACTGAGCCAAGGTGAAGAATGGTGATATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGCAGCACATAGGACACTGAGCCAAGGTGAAGAATGGTGATATCT  100

seq1  TGCCATGAATTATGTGACAAGGGGGGAGGGGAATTTATCCCTTATGATAA  150
      ||||||||| ||||||||||||||||||| ||||||||||||||||||||
seq2  TGCCATGAAATATGTGACAAGGGGGGAGGAGAATTTATCCCTTATGATAA  150

seq1  GGATCAGGGGTGGCTTGGTGCTTTTTAGGTTTCTATTTGCCATGTGCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAGGGGTGGCTTGGTGCTTTTTAGGTTTCTATTTGCCATGTGCAAC  200

seq1  AGCTTCAAGAGCCCATTTCTGATGTCCTTGGAATCATTATGTTCCCATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCAAGAGCCCATTTCTGATGTCCTTGGAATCATTATGTTCCCATGA  250

seq1  TGATGCACTCAGGCATGCCTGGAAATAAGCAGAACACTTGCCAGAGAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCACTCAGGCATGCCTGGAAATAAGCAGAACACTTGCCAGAGAGCT  300

seq1  TGATTTCTATAAGGGAGGGAATATTGCTAATTTATGCAGCAGGATATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCTATAAGGGAGGGAATATTGCTAATTTATGCAGCAGGATATTTG  350

seq1  GTCACATTGTAAACCCCAAGACTGTGTTGATTCCAAAAAAAATAAAAATA  400
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTCACATTGTAAACCCCAAGACTGTGTTGATTCC-AAAAAAATAAAAATA  399

seq1  ATAAAAAAATAAAAAAATTTTTATGGTGTAGCTCAGCCCTAGCACAGACC  450
      |||||||||||||||||  |||||||||||||||||||||||||||||||
seq2  ATAAAAAAATAAAAAAA-ATTTATGGTGTAGCTCAGCCCTAGCACAGACC  448

seq1  TGTAACCCAAGAGCTTTCTGTTCAGTGTACATTTCTGACCTGTGGCTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACCCAAGAGCTTTCTGTTCAGTGTACATTTCTGACCTGTGGCTCAG  498

seq1  CCCTATCACACACATTTATTGGAAAGCAAAATAAAGTCAACTCCAGGTCA  550
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCCTATCACACACATTTATTGCAAAGCAAAATAAAGTCAACTCCAGGTCA  548

seq1  AGAGTTAGAGCAATTAACCAGTTGAAAGAGAATGAATATAACTAAAGAGA  600
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGAGTTAGAGCAATTAACCAGTTGAATGAGAATGAATATAACTAAAGAGA  598

seq1  AAGAAGGTCTTTTTTTGATTTTTATTTTTTTGTTTTTTCTTTTTCCTTTT  650
      | ||||||||||||||  ||||| ||||||||||||||||||||||||||
seq2  AGGAAGGTCTTTTTTTCTTTTTTGTTTTTTTGTTTTTTCTTTTTCCTTTT  648

seq1  TTCTTTTTTCTTTTGTTCTTTTTAGACAGGGTTTCTCTGTATAGCCCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTCTTTTGTTCTTTTTAGACAGGGTTTCTCTGTATAGCCCTGG  698

seq1  CTGTCCTGGAACTCACTCTGTAGACCAGGCTGTCCTCAAACTCAGAAATC  750
      ||||||||||||| ||||||||||||||| ||||||||||||||||||||
seq2  CTGTCCTGGAACTTACTCTGTAGACCAGGATGTCCTCAAACTCAGAAATC  748

seq1  TGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCACCACCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCACCACCACT  798

seq1  GTCCCACCTCAGAAAGAAGGTCTTTAAG-TTGAAGG  835
      ||||| |||||||||||||||||||||| |||||||
seq2  GTCCCGCCTCAGAAAGAAGGTCTTTAAGTTTGAAGG  834