BAC Information

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BAC

Clone NameB6Ng01-299C02
Chromosome5 (Build37)
Map Location 32,146,265 - 32,147,419
singlet/doubletsinglet
Overlap geneBre
Upstream geneMapre3, 1110039B18Rik, 9430057O19Rik, 2310016E02Rik, Emilin1, Khk, Cgref1, Abhd1, Preb, Tcf23, Slc5a6, 0610007C21Rik, Cad, Slc30a3, Dnajc5g, Trim54, Ucn, Mpv17, Gtf3c2, Eif2b4, Snx17, Zfp513, Ppm1g, ENSMUSG00000055424, Nrbp1, Krtcap3, Ift172, Fndc4, Gckr, Zfp512, 4930548H24Rik, Xab1, Supt7l, Slc4a1ap, Mrpl33, Rbks, LOC100040000
Downstream geneFosl2, LOC672217, Plb1, EG665350, LOC545743, Ppp1cb, LOC634553, LOC675983, Yes1, LOC100039775, Pisd, C330019G07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299C02.bB6Ng01-299C02.g
ACCGA094059GA094060
length1,1611,163
definitionB6Ng01-299C02.b B6Ng01-299C02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgggtaagtttttcagttttccttttagcatcctagaaaataga
tttgatgagtagatccttttgccttctctactcgggtcattgcctctgtg
tctcaacagaggcttgccgcacatgtcaggggatagctgcctactcctca
ctgctgcttcttcggtgctgccagctcttgatggcttcctagctagtgcc
agcacacactgcctttccaccttgtctgcaaggatatcttcagacacttc
tgaaatgcttggctggagtgctaataccctgactacactatttctcagat
ttgattgcttagtaatggtcaatttaccatgaaaagttgtagtaatccag
atgatcagtataaagccatggaacaaaataaaatattcatatcagacccg
tgtgaaccactgatttttgacaaaagtgcagggttagttcagaggtaaaa
aaataatcttttgaataagatgatgctggaacaatcaaatatctatatag
ataataaggataaggaacttaaatttaaaactttagattgttttaaaaaa
aataaacatgataaaccctcctaaggcatatgttttcttttaaagtcagt
ttaaatggtatatatcaaaagcttagttattagtagctggacatggtggc
actttccagtacttggccagattctgtgatttccagggcagcctggtcta
agtaatttctaggccagtcagggctacttagtgagaccctgtctaaaacc
aagcaagcaagcaaacaaacaaacagtcaaaaactataccaaaacaaaac
aaaatataagtatatatcagtccagataacatctaaccaagaactctttg
gggttttcaattcttttaaagggtgagttctgaacagttttagaactatt
gctatagacttttgcctgtaatttacgtgggattcagttcaaaatataaa
tatttccagactcgttacatgcttaaatcatcatagatgagagaccagaa
ggtttcagtgttgccagcttgcgctatggagagttgcttctttgaatcag
taccttccatggagcagctaaggctcatgagcttctagagcttctagctg
agcaaaagtatccttgagttagcacatttgaatggagagctccaagtgtg
gaatctgaagt
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttccttttttctagagc
ttttagatgtgttgtcaagctgctagtatgtgctctctcccgttttttct
tgaaggcactcatagctatgagtttccctcttagaatgcttcattgtgtc
caaagtttggttacgttgtgctttcattttcataaactctgaaaagctct
taagttctttctttatttcttccttgaacccagtatcattggagaagaag
tgtttgttccagtccatgtgatgtgccttcgtcatctatctgttatggga
aagatctagcgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_32146265_32147419
seq2: B6Ng01-299C02.b_42_1202

seq1  GAATTCTGGGTAAGTTTTTCAGTTTTCCTTTTAGCATCCTAGAAAATAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGTAAGTTTTTCAGTTTTCCTTTTAGCATCCTAGAAAATAGA  50

seq1  TTTGATGAGTAGATCCTTTTGCCTTCTCTACTCGGGTCATTGCCTCTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGAGTAGATCCTTTTGCCTTCTCTACTCGGGTCATTGCCTCTGTG  100

seq1  TCTCAACAGAGGCTTGCCGCACATGTCAGGGGATAGCTGCCTACTCCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACAGAGGCTTGCCGCACATGTCAGGGGATAGCTGCCTACTCCTCA  150

seq1  CTGCTGCTTCTTCGGTGCTGCCAGCTCTTGATGGCTTCCTAGCTAGTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCTTCTTCGGTGCTGCCAGCTCTTGATGGCTTCCTAGCTAGTGCC  200

seq1  AGCACACACTGCCTTTCCACCTTGTCTGCAAGGATATCTTCAGACACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACACTGCCTTTCCACCTTGTCTGCAAGGATATCTTCAGACACTTC  250

seq1  TGAAATGCTTGGCTGGAGTGCTAATACCCTGACTACACTATTTCTCAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGCTTGGCTGGAGTGCTAATACCCTGACTACACTATTTCTCAGAT  300

seq1  TTGATTGCTTAGTAATGGTCAATTTACCATGAAAAGTTGTAGTAATCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTGCTTAGTAATGGTCAATTTACCATGAAAAGTTGTAGTAATCCAG  350

seq1  ATGATCAGTATAAAGCCATGGAACAAAATAAAATATTCATATCAGACCCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCAGTATAAAGCCATGGAACAAAATAAAATATTCATATCAGACCCG  400

seq1  TGTGAACCACTGATTTTTGACAAAAGTGCAGGGTTAGTTCAGAGGTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACCACTGATTTTTGACAAAAGTGCAGGGTTAGTTCAGAGGTAAAA  450

seq1  AAATAATCTTTTGAATAAGATGATGCTGGAACAATCAAATATCTATATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATCTTTTGAATAAGATGATGCTGGAACAATCAAATATCTATATAG  500

seq1  ATAATAAGGATAAGGAACTTAAATTTAAAACTTTAGATTGTTTTAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAGGATAAGGAACTTAAATTTAAAACTTTAGATTGTTTTAAAAAA  550

seq1  AATAAACATGATAAACCCTCCTAAGGCATATGTTTTCTTTTAAAGTCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACATGATAAACCCTCCTAAGGCATATGTTTTCTTTTAAAGTCAGT  600

seq1  TTAAATGGTATATATCAAAAGCTTAGTTATTAGTAGCTGGACATGGTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGGTATATATCAAAAGCTTAGTTATTAGTAGCTGGACATGGTGGC  650

seq1  ACTTTCCAGTACTTGGCCAGATTCTGTGATTTCCAGGGCAGCCTGGTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCAGTACTTGGCCAGATTCTGTGATTTCCAGGGCAGCCTGGTCTA  700

seq1  AGTAATTTCTAGGCCAGTCAGGGCTACTTAGTGAGACCCTGTCTAAAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTTCTAGGCCAGTCAGGGCTACTTAGTGAGACCCTGTCTAAAACC  750

seq1  AAGCAAGCAAGCAAACAAACAAACAGTCAAAAACTATACCAAAACAAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGCAAGCAAACAAACAAACAGTCAAAAACTATACCAAAACAAAAC  800

seq1  AAAATATAAGTATATATCAGTCCAGATAACATCTAACCAAGAACTCTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAAGTATATATCAGTCCAGATAACATCTAACCAAGAACTCTTTG  850

seq1  GGGTTTTCAATTCTTTT-AAGGGTGAGTTCTGAACAGTTTTAGAACTATT  899
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGGTTTTCAATTCTTTTAAAGGGTGAGTTCTGAACAGTTTTAGAACTATT  900

seq1  GCTATAGACTTTTGCCTGTAATTTACGT-GGATTCAGTTCAAAATATAAA  948
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GCTATAGACTTTTGCCTGTAATTTACGTGGGATTCAGTTCAAAATATAAA  950

seq1  TATTTCCAGACTCGTTACATGCTT-AATCATCATAGATGAGAAGACCAGA  997
      |||||||||||||||||||||||| |||||||||||||||| ||||||||
seq2  TATTTCCAGACTCGTTACATGCTTAAATCATCATAGATGAG-AGACCAGA  999

seq1  AGGTTTCAGTGTTGCCAGCTTGCGCCTATGGAGAGTTGC-TCTTTGAAAT  1046
      |||||||||||||||||||||||| |||||||||||||| |||||| |||
seq2  AGGTTTCAGTGTTGCCAGCTTGCG-CTATGGAGAGTTGCTTCTTTG-AAT  1047

seq1  CAGTACC-TCCAT-GAGCAGCT-AGGCTCATGAGC-TCTAGAGC-TCTAG  1091
      ||||||| ||||| |||||||| |||||||||||| |||||||| |||||
seq2  CAGTACCTTCCATGGAGCAGCTAAGGCTCATGAGCTTCTAGAGCTTCTAG  1097

seq1  CTGAGCAAAAGTATCCTTGGAGTAGGCACATTTG-ATTGAGAG-TTCAAG  1139
      |||||||||||||||||| ||||  ||||||||| || ||||| | ||||
seq2  CTGAGCAAAAGTATCCTT-GAGTTAGCACATTTGAATGGAGAGCTCCAAG  1146

seq1  TGTGGAAATCTGAAGT  1155
      ||||| ||||||||||
seq2  TGTGG-AATCTGAAGT  1161