BAC Information

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BAC

Clone NameB6Ng01-301E18
Chromosome5 (Build37)
Map Location 56,642,567 - 56,643,560
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666405
Downstream geneLOC100041335, LOC100041349
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301E18.bB6Ng01-301E18.g
ACCGA095644GA095645
length1,211997
definitionB6Ng01-301E18.b B6Ng01-301E18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattatttttaaaagcttagtagtactccattgtctaaatgtaac
ttatgttctgtatctcttcctctgttcagggatatctggattctttccac
tttctggctattataaataaggctgctatgaacacagtggagcaggtgtt
ttcattacatgttggagcatcttttgtgtatgtacccaagagtgttatgg
ctgcgtcctctgatagtactatgtccaatttgttcagaaaccaccagact
gatttccagagtggttatgccagcttgcaatcccacaggaaatggagaag
tgttcctctttctccacatcctcattagcatctgttgtcacctgagattt
tatcttagctattctgactggggtgaggtggaatctcagggttgttttga
ttttcatttccctaatgactaaggatgttgaacatctctttaggtgcttc
tcagtcatttgatatttctcagttgtgaattctttgtttatctctggacc
ccatttttaacagggttatttggttctctgaagtataatttcttgagttc
tttgtatatgttggacagtatccaaattaacaaaatcagaaatgaaagtg
gacacctaacaatagaaagtgagaaaacccaaaataccatcagatcctac
tacaaaagcatatactcaacaaaactggaaaacctggataaaattgataa
ttttctagacagataccaggaaccaaagttaaatcagatcatattaatgg
tctaaacagtcccttatgctctaaagaaatagaagcagtcattaatagtc
tcccaacaacacaacaacaacaacaaaaacaaaacaaacaacacaacaca
caaaccccaaaaaacaaagtttaggaccagatgggtttactgcagagttt
tatcagatcttcaaaaaaagagctcacaccaatactcctcaaactatttc
cacaaaatagaaacagaaaggaccactacccatttcgtcctatgaaacca
ctattacttctcattatttagaccacacaaatgctcaacaaagaaaaaat
aaccttcagaccattttctttatgatatgatggaaaatttactcaattaa
attcctcacaattgattccagacccattcaaatgatcattccattcatga
tccaagtaagcttcattccagatgcaggagtggtttaatatgttgggaaa
tctccatccat

gaattcagaggattttgcaatctatagctttaaaattttactacaacata
ttttattaaaactatttgtaaaattataaacttagttcgttctttacatt
ggttatataagcatttgtttttggttgcagtgggaaagcaaatggaaagg
tacttaataggttaagtgttaagaataagagactgggtgttcatcatgca
gtttgtctggatgaacaacaccatcaatcctcagggaatattaaggaaga
agaggagacagtgtaaaagccataagctggaaaggactgctatgtccttc
tgcctttatattatgacattactaatgcactactgagctcacaaagctgt
acttacttgcagcaacctgaacagatcaagtgtgggagaactgatggagt
tgttgatctcgatactcatacactactgaggactattcatagttgatagt
tcctggaagacagaaaatgattcattcttgctctatctttctctgaagat
ggaaccaatagaatgattctattctttagtaggtgtctacacatttatgc
acatatgcacagcacaaactggacttagtgtgttagacacacacttaaaa
aaaagaaacatttttcgttttagttgttatattcgttttaattaatcatt
aaagaaacaaattttgaaggacaagatgaactattagagattggaaattg
gaggtaattatatttcaatgtatacatgtatgaaagtctaaaaataatga
aaaactgtaaaaatagaaatacccactagtaagtagatattagacaaaaa
caacaacaacaacaacaaaatacccagaatacccaggatacaaccgacag
gactcaagaaggaataacaagcaaaaggaatcaagtgaggatgcctcaat
cccaattgggagggagaagaaagcagttcatgggggtcagagagaggaag
gaacctggtgggagaagggacaatggagggaatgaaggagggaacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_56642567_56643560
seq2: B6Ng01-301E18.g_67_1063

seq1  GAATTCAGAGGATTTTGCAATCTATAGCTTTAAAATTTTACTACAACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGGATTTTGCAATCTATAGCTTTAAAATTTTACTACAACATA  50

seq1  TTTTATTAAAACTATTTGTAAAATTATAAACTTAGTTCGTTCTTTACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTAAAACTATTTGTAAAATTATAAACTTAGTTCGTTCTTTACATT  100

seq1  GGTTATATAAGCATTTGTTTTTGGTTGCAGTGGGAAAGCAAATGGAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATATAAGCATTTGTTTTTGGTTGCAGTGGGAAAGCAAATGGAAAGG  150

seq1  TACTTAATAGGTTAAGTGTTAAGAATAAGAGACTGGGTGTTCATCATGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAATAGGTTAAGTGTTAAGAATAAGAGACTGGGTGTTCATCATGCA  200

seq1  GTTTGTCTGGATGAACAACACCATCAATCCTCAGGGAATATTAAGGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCTGGATGAACAACACCATCAATCCTCAGGGAATATTAAGGAAGA  250

seq1  AGAGGAGACAGTGTAAAAGCCATAAGCTGGAAAGGACTGCTATGTCCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGACAGTGTAAAAGCCATAAGCTGGAAAGGACTGCTATGTCCTTC  300

seq1  TGCCTTTATATTATGACATTACTAATGCACTACTGAGCTCACAAAGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTATATTATGACATTACTAATGCACTACTGAGCTCACAAAGCTGT  350

seq1  ACTTACTTGCAGCAACCTGAACAGATCAAGTGTGGGAGAACTGATGGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACTTGCAGCAACCTGAACAGATCAAGTGTGGGAGAACTGATGGAGT  400

seq1  TGTTGATCTCGATACTCATACACTACTGAGGACTATTCATAGTTGATAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGATCTCGATACTCATACACTACTGAGGACTATTCATAGTTGATAGT  450

seq1  TCCTGGAAGACAGAAAATGATTCATTCTTGCTCTATCTTTCTCTGAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAAGACAGAAAATGATTCATTCTTGCTCTATCTTTCTCTGAAGAT  500

seq1  GGAACCAATAGAATGATTCTATTCTTTAGTAGGTGTCTACACATTTATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCAATAGAATGATTCTATTCTTTAGTAGGTGTCTACACATTTATGC  550

seq1  ACATATGCACAGCACAAACTGGACTTAGTGTGTTAGACACACACTTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGCACAGCACAAACTGGACTTAGTGTGTTAGACACACACTTAAAA  600

seq1  AAAAGAAACATTTTTCGTTTTAGTTGTTATATTCGTTTTAATTAATCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAACATTTTTCGTTTTAGTTGTTATATTCGTTTTAATTAATCATT  650

seq1  AAAGAAACAAATTTTGAAGGACAAGATGAACTATTAGAGATTGGAAATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACAAATTTTGAAGGACAAGATGAACTATTAGAGATTGGAAATTG  700

seq1  GAGGTAATTATATTTCAATGTATACATGTATGAAAGTCTAAAAATAATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAATTATATTTCAATGTATACATGTATGAAAGTCTAAAAATAATGA  750

seq1  AAAACTGTAAAAATAGAAATACCCACTAGTAAGTAGATATTAGACAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGTAAAAATAGAAATACCCACTAGTAAGTAGATATTAGACAAAAA  800

seq1  CAACAACAACAACAACAAAATACCCAGAATACCCAGGATACAACCGACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAACAACAACAAAATACCCAGAATACCCAGGATACAACCGACAG  850

seq1  GACTCAAGAAGG-ATAACAAGCAAAAGGAATCAAGTGAGGATGCCTCAAT  899
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GACTCAAGAAGGAATAACAAGCAAAAGGAATCAAGTGAGGATGCCTCAAT  900

seq1  CCCAATTGGGAGGGAGAAGAAAGCAG-TCATGGGGGTCAGAGAGAGGAAG  948
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCCAATTGGGAGGGAGAAGAAAGCAGTTCATGGGGGTCAGAGAGAGGAAG  950

seq1  GAACCTGGTGGGAGAAGGGAC-ATGGAGGGGAATG-AGGAGGGAACAC  994
      ||||||||||||||||||||| ||||| ||||||| ||||||||||||
seq2  GAACCTGGTGGGAGAAGGGACAATGGA-GGGAATGAAGGAGGGAACAC  997


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