BAC Information

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BAC

Clone NameB6Ng01-301L18
Chromosome5 (Build37)
Map Location 5,193,871 - 5,195,002
singlet/doubletsinglet
Overlap genePftk1
Upstream geneENSMUSG00000053178, Fzd1, LOC667678
Downstream gene1700015F17Rik, Cldn12, Gtpbp10, LOC667699, EG667705, A330021E22Rik, Steap2, Steap1, LOC727711, LOC546854
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301L18.bB6Ng01-301L18.g
ACCGA095969GA095970
length1,1201,193
definitionB6Ng01-301L18.b B6Ng01-301L18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagggtaaatctccagaaggtggatggattcatgaagtggacac
gtagacaaggactcagctaaacaagtatatgcacagaagtcaacagcttc
taactgctatttaaacgtaggagtgagtgtttatcagagcaaagagggct
tttttttttctctccttagcctgtacaaactcaaaggtcaacacgggata
aagagaaaagccaccctgcctggattttctgatgtggcagaaaagattct
ctcagtcatgtgcaatctgctaaaaagttagacaaagaaacccagaaaag
tttgtgtttggtttagaacaaagagacaatgggtaaactttctatgaagc
ttcagttaaatggtaagaaagacaaatggaaaggaagaatgagatgagaa
agtagaaataaataggacttcagtaagagtgtcctggctagttctatgat
accctgacacatgctagagtcattctggaagatggatactcaattgagaa
aaatgcccctagcagactggcctgtgggaaagcctgtggtacattttctt
gatgattaaatgtggaagggcccagcctgttggggttagtgctgggcagg
tggtagtgggaggtaaaagaaagtagggtaagccagccttgattaagcag
cgtttctccataccttttgcatcaattcctgcttccatattcctaccctg
cttgagttccttgcctgacctccttgactgatgaactgtgatatggaagt
gtaagaaaaataactctttcctcccccaagttgcctctggtcatggtatt
ttatcacagcaacagaaaccctaatttaaaagagaaagagaaaaagaaga
aggaagactagcagcagcagcatcgtcgccgtcatcatcatcatcgtcat
ctttgtcatcatcattgtcatcactaagtgacatccagaagatacagatg
gatttaatctgtcaataccttcaaatataagtggcaaatcaccaatacat
cattgggatcagacaaacttgcactggtctattgatggggagacactgaa
ggtctaagagaagataattgcattttaaatgaatgtacaggtgactacta
atctaagtgttatggcagtg
gaattccatgatcgtgggcccactgtcgcacttctctggctatgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagataag
gcattctgtgagtctatggatgacagttttggcagaagcattacgtgaag
gaaaggcaaatctataaccagaataagtatctactccagtaagagcaaaa
cattgtgcttttcacggaggaagtggtccaatgtagtcagcctgccacca
ggttgctggctggtcaccttgaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagctttggtgagtggaagcccgtgttgctgagcccaagcataacctcc
atctcgaccaccatggccactttgttcatgtgcccgttgagcaatgacag
ggatggctggggagagaggctgactgcccacagaacgggtcatcttatcc
acttgattattgaactcctcctcagctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccacttggagagatcta
tccacatacttcttccccagatgtctttctcaccaattttccaattgtga
tctttccaagtccctgaccatccagccaatccattggctacagcccatga
gtcagtgaataatcgtacatctggccatttcttcttccaaacaaactgta
ataccatgtgtactgcctgaagttctgcccactgtgaagatttcccttca
cctgtgtctttcagggttgtcccggaaaagggttgtaatgctgcagctgt
ctacttctgggtggggcctgcataacgtgcagagccatcagtaaaccagg
ccctagtcttctccttcttcggtcagccagtcatagggaacccaatgagg
ctataggcgcatgcttggcagcagatggcattgtaacaagagtagaaacc
ataggcatttgagcacttctcatgtaactgcttgtgcctttcaggacctg
ctgttgcctgatcatgtattataccactttccattggataaataagactg
ctgttgttgcaattattccctacttatgactgaaggtctgtaataaccac
caaggtctatgaatggagtagagtccggggtgtgccactcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_5193871_5195002
seq2: B6Ng01-301L18.b_45_1164

seq1  GAATTCAAGGGTAAATCTCCAGAAGGTGGATGGATTCATGAAGTGGACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGGTAAATCTCCAGAAGGTGGATGGATTCATGAAGTGGACAC  50

seq1  GTAGACAAGGACTCAGCTAAACAAGTATATGCACAGAAGTCAACAGCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACAAGGACTCAGCTAAACAAGTATATGCACAGAAGTCAACAGCTTC  100

seq1  TAACTGCTATTTAAACGTAGGAGTGAGTGTTTATCAGAGCAAAGAGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGCTATTTAAACGTAGGAGTGAGTGTTTATCAGAGCAAAGAGGGCT  150

seq1  TTTTTTTTTCTCTCCTTAGCCTGTACAAACTCAAAGGTCAACACGGGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCTCTCCTTAGCCTGTACAAACTCAAAGGTCAACACGGGATA  200

seq1  AAGAGAAAAGCCACCCTGCCTGGATTTTCTGATGTGGCAGAAAAGATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAAAGCCACCCTGCCTGGATTTTCTGATGTGGCAGAAAAGATTCT  250

seq1  CTCAGTCATGTGCAATCTGCTAAAAAGTTAGACAAAGAAACCCAGAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTCATGTGCAATCTGCTAAAAAGTTAGACAAAGAAACCCAGAAAAG  300

seq1  TTTGTGTTTGGTTTAGAACAAAGAGACAATGGGTAAACTTTCTATGAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTTTGGTTTAGAACAAAGAGACAATGGGTAAACTTTCTATGAAGC  350

seq1  TTCAGTTAAATGGTAAGAAAGACAAATGGAAAGGAAGAATGAGATGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTAAATGGTAAGAAAGACAAATGGAAAGGAAGAATGAGATGAGAA  400

seq1  AGTAGAAATAAATAGGACTTCAGTAAGAGTGTCCTGGCTAGTTCTATGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAATAAATAGGACTTCAGTAAGAGTGTCCTGGCTAGTTCTATGAT  450

seq1  ACCCTGACACATGCTAGAGTCATTCTGGAAGATGGATACTCAATTGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGACACATGCTAGAGTCATTCTGGAAGATGGATACTCAATTGAGAA  500

seq1  AAATGCCCCTAGCAGACTGGCCTGTGGGAAAGCCTGTGGTACATTTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCCCTAGCAGACTGGCCTGTGGGAAAGCCTGTGGTACATTTTCTT  550

seq1  GATGATTAAATGTGGAAGGGCCCAGCCTGTTGGGGTTAGTGCTGGGCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTAAATGTGGAAGGGCCCAGCCTGTTGGGGTTAGTGCTGGGCAGG  600

seq1  TGGTAGTGGGAGGTAAAAGAAAGTAGGGTAAGCCAGCCTTGATTAAGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGTGGGAGGTAAAAGAAAGTAGGGTAAGCCAGCCTTGATTAAGCAG  650

seq1  CGTTTCTCCATACCTTTTGCATCAATTCCTGCTTCCATATTCCTACCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCTCCATACCTTTTGCATCAATTCCTGCTTCCATATTCCTACCCTG  700

seq1  CTTGAGTTCCTTGCCTGACCTCCTTGACTGATGAACTGTGATATGGAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTTCCTTGCCTGACCTCCTTGACTGATGAACTGTGATATGGAAGT  750

seq1  GTAAGAAAAATAACTCTTTCCTCCCCCAAGTTGCCTCTGGTCATGGTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAAAAATAACTCTTTCCTCCCCCAAGTTGCCTCTGGTCATGGTATT  800

seq1  TTATCACAGCAACAGAAACCCTAA-TTAAAAGAGAAAGAGAAAAAGAAGA  849
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTATCACAGCAACAGAAACCCTAATTTAAAAGAGAAAGAGAAAAAGAAGA  850

seq1  AGGAAGACTAGCAGCAGCAGCATCGTCGCCGTCATCATCATCATCGTCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGACTAGCAGCAGCAGCATCGTCGCCGTCATCATCATCATCGTCAT  900

seq1  CTTTGTCATCATCATTGTCATCACTAAGTGACAATCCAGAAGATAACAGA  949
      |||||||||||||||||||||||||||||||| ||||||||||| |||| 
seq2  CTTTGTCATCATCATTGTCATCACTAAGTGAC-ATCCAGAAGAT-ACAG-  947

seq1  ATGGATTTAATCTGTCAATACCTTCAAATATTAAGTGGCAAATCACCAAT  999
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATGGATTTAATCTGTCAATACCTTCAAATA-TAAGTGGCAAATCACCAAT  996

seq1  ACATCATT-GGATCAGAACCAAACCTTGCACTGGTCTATTTGATGGGAGA  1048
      |||||||| ||||||||  |||| |||||||||||||| |||||||  | 
seq2  ACATCATTGGGATCAGA--CAAA-CTTGCACTGGTCTA-TTGATGG--GG  1040

seq1  ACAAACTG-AGGTCTTAGAGAAAGATAATTTGCATTTTTAAATG-ATGTA  1096
      | | |||| |||||| |||| ||||||| ||||| ||||||||| |||||
seq2  AGACACTGAAGGTCTAAGAG-AAGATAA-TTGCA-TTTTAAATGAATGTA  1087

seq1  CAAGTGAAACTACTAATTCTAAGTGTTATGGCAGTG  1132
      || |||  |||||||| |||||||||||||||||||
seq2  CAGGTG--ACTACTAA-TCTAAGTGTTATGGCAGTG  1120