BAC Information

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BAC

Clone NameB6Ng01-305N19
Chromosome5 (Build37)
Map Location 151,463,815 - 151,704,050
singlet/doubletdoublet
Overlap geneBC037393, Aprin, LOC100040180
Upstream geneEG433968, B3galtl, LOC100040089, Rxfp2, LOC667470, Fry, LOC100042068, Gm5, XM_359419, Brca2, B230342M21Rik
Downstream geneKl, LOC667510, Stard13, LOC630708, LOC625175, LOC100042166, EG435877, EG632649, EG632671, Rfc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305N19.bB6Ng01-305N19.g
ACCGA099044GA099045
length1,1391,076
definitionB6Ng01-305N19.b B6Ng01-305N19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,463,815 - 151,464,946)(151,702,969 - 151,704,050)
sequence
gaattcataatcaagtattcactcaggtcttttacttaccgagacaatgt
tgtttttccagaaccggggaggcctcgcaaaagaataagcaatttctgca
atttatttaatttctcctcttgaaaccactggttcacaaacctgtctgtt
tcattatgcttgtccatggaaggatcttgccagcactctcggatttcaca
gaaaccattattcacactttcatcttgtacactgcagccatttctaaagg
gatgaacattattgctagtcacatcatagttagcatattcatcgttctga
tcaaacgtcaagcagctccagccatcctgataactgtctacgtaacaccc
attctgcatctgagagtcatctcgaccatggaaaacatctggtgatggat
gtagtggggtaccaaatctttgaaaattaaaataattaaaactggaaaga
ggatcatggggtatgacaaaaggatgcatggactgccattcaggcctgaa
ggaaggaaatgaagtttcacaaaatgcaggcatcaactgctcatcacagg
gatagtctggttcatcctccaagtactcttgataaccacaatgtgactga
agaacatcactgagatctttgttttcctcctcagactttagagtattaca
ggcccagtcataagaaataattggttcttcggaaggttctggttccgtac
aactgccttgggaagcttcattttcattttccagctcttcaatttctttg
taaaactgggataattctgtatccatctccaattttttggagttagattt
ctgtttttcttcttgtcttcttttgctatctatactactgaaagtatctg
tctcactcttcctttcacggcatttctttttctcagggggtttgtaaatg
gggcctatgaatgctttacttgtgctatagatttcatcatccttgggcca
gtggtgaaggctttccatcctgcaaagctggggaaccgatggattcacta
ccacccagtttatcaccaggcatctccttgtgcaatggctttacaccatc
tgtactgcttttgtcttcctgaggacacaaccacgtctttcttgaagtta
tggtggacaaccgccgacccttattaattctggcttttt
gaattcactttgtagaccaggcgtggccacaaactcacagagatccacct
gcctctgcctcccagggtgctgggattaaaggcacataccatcaagcctg
gcttccgatatgatcttttcttggcagcaggagtgtttcccaccccagag
ttgaagctgctgagtgggaactcttacaacacttgaatgtctggtgcctt
agctattcaaccaacctgtgtcagagagactcgggttgtttggtttggtt
ttgtatccacgtggaccaagtggttcaggggagaggggccccagcttctg
ttctgtgaagggtagcaaggcacgtttaagccaattctggcaatcctgac
ccccttccattgtgccaggatttgtctatctctaccaaaaccgaaaatgt
aatccccagggatgtgtgttaatatattttggtgacaggacttagtgaca
aagaagtgactgccctcccttgatgaacctatggaccaatacacgaatgg
attgtgagtacctaaagcagtgcctttgtagaagtgagcttcctcctgct
agcttcttcctcctgctagcttcttcctcctgctagcttcttcctcctgc
tagcttcttcctcctgctagcttcttcctcctgctagcttcttcctcctg
ctagcttcttccgtggtgctgtatgacactctgactatcctgtggcctgg
aaagaagacctgctcactggcactgaggttcctggaccacgaatgatgga
ggtctctcttccttataaacatctcggcccttggtattcagtttacagca
acagaaatcgtcgaagacgccacagtgtgaggcttggatgggaacagtct
ttggtttccttgctgatacagaatttaagaaggaacacttctaccattag
catcgtcagtctctcagtgtggagctctggtgccatcttggtacacacaa
ggacagctgagcatgaaggcagcaagaaaagacaaactggaatcccagag
atgccctgagcatctgtgattttgttgaaagtatttttctgggcctttga
cctgggaactttctcttcttctagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_151463815_151464946
seq2: B6Ng01-305N19.b_45_1183

seq1  GAATTCATAATCAAGTATTCACTCAGGTCTTTTACTTACCGAGACAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAATCAAGTATTCACTCAGGTCTTTTACTTACCGAGACAATGT  50

seq1  TGTTTTTCCAGAACCGGGGAGGCCTCGCAAAAGAATAAGCAATTTCTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCCAGAACCGGGGAGGCCTCGCAAAAGAATAAGCAATTTCTGCA  100

seq1  ATTTATTTAATTTCTCCTCTTGAAACCACTGGTTCACAAACCTGTCTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTAATTTCTCCTCTTGAAACCACTGGTTCACAAACCTGTCTGTT  150

seq1  TCATTATGCTTGTCCATGGAAGGATCTTGCCAGCACTCTCGGATTTCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATGCTTGTCCATGGAAGGATCTTGCCAGCACTCTCGGATTTCACA  200

seq1  GAAACCATTATTCACACTTTCATCTTGTACACTGCAGCCATTTCTAAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCATTATTCACACTTTCATCTTGTACACTGCAGCCATTTCTAAAGG  250

seq1  GATGAACATTATTGCTAGTCACATCATAGTTAGCATATTCATCGTTCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAACATTATTGCTAGTCACATCATAGTTAGCATATTCATCGTTCTGA  300

seq1  TCAAACGTCAAGCAGCTCCAGCCATCCTGATAACTGTCTACGTAACACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACGTCAAGCAGCTCCAGCCATCCTGATAACTGTCTACGTAACACCC  350

seq1  ATTCTGCATCTGAGAGTCATCTCGACCATGGAAAACATCTGGTGATGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGCATCTGAGAGTCATCTCGACCATGGAAAACATCTGGTGATGGAT  400

seq1  GTAGTGGGGTACCAAATCTTTGAAAATTAAAATAATTAAAACTGGAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGGGGTACCAAATCTTTGAAAATTAAAATAATTAAAACTGGAAAGA  450

seq1  GGATCATGGGGTATGACAAAAGGATGCATGGACTGCCATTCAGGCCTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCATGGGGTATGACAAAAGGATGCATGGACTGCCATTCAGGCCTGAA  500

seq1  GGAAGGAAATGAAGTTTCACAAAATGCAGGCATCAACTGCTCATCACAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAAATGAAGTTTCACAAAATGCAGGCATCAACTGCTCATCACAGG  550

seq1  GATAGTCTGGTTCATCCTCCAAGTACTCTTGATAACCACAATGTGACTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTCTGGTTCATCCTCCAAGTACTCTTGATAACCACAATGTGACTGA  600

seq1  AGAACATCACTGAGATCTTTGTTTTCCTCCTCAGACTTTAGAGTATTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATCACTGAGATCTTTGTTTTCCTCCTCAGACTTTAGAGTATTACA  650

seq1  GGCCCAGTCATAAGAAATAATTGGTTCTTCGGAAGGTTCTGGTTCCGTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGTCATAAGAAATAATTGGTTCTTCGGAAGGTTCTGGTTCCGTAC  700

seq1  AACTGCCTTGGGAAGCTTCATTTTCATTTTCCAGCTCTTCAATTTCTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCCTTGGGAAGCTTCATTTTCATTTTCCAGCTCTTCAATTTCTTTG  750

seq1  TAAAACTGGGATAATTCTGTATCCATCTCCAATTTTTTGGAGTTAGATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTGGGATAATTCTGTATCCATCTCCAATTTTTTGGAGTTAGATTT  800

seq1  CTGTTTTTCTTCTTGTCTTCTTTTGCTATCTATACTACTGAAAGTATCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTTCTTCTTGTCTTCTTTTGCTATCTATACTACTGAAAGTATCTG  850

seq1  TCTCACTCTTCCTTTCACGGCATTTCTTTTTCTCAGGGGGTTTGTAAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTCTTCCTTTCACGGCATTTCTTTTTCTCAGGGGGTTTGTAAATG  900

seq1  GGGCCTATGAATGCTTTACTTGTGCTATAGATTTCATCATCCTT-GGCCA  949
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGGCCTATGAATGCTTTACTTGTGCTATAGATTTCATCATCCTTGGGCCA  950

seq1  GTGGTGAAGGCTTTCCATCCTGCAAAGCTGGGGAACCGATGGATTCACTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGAAGGCTTTCCATCCTGCAAAGCTGGGGAACCGATGGATTCACTA  1000

seq1  CCACCCAGTTTATCACCAGGCATCTCCTTGTGCAATGGCTTTAACACATC  1049
      |||||||||||||||||||||||||||||||||||||||||||   ||||
seq2  CCACCCAGTTTATCACCAGGCATCTCCTTGTGCAATGGCTTTACACCATC  1050

seq1  TGTACTGGTTTTGTCTTCCTGAGG--ACAAACACGTCTT--CTGAAGTTA  1095
      ||||||| ||||||||||||||||  |||| ||||||||   ||||||| 
seq2  TGTACTGCTTTTGTCTTCCTGAGGACACAACCACGTCTTTCTTGAAGTT-  1099

seq1  ATGGTGG-CCACCG-CGACCC-TATTATTTCTGGGTTTTT  1132
      ||||||| | |||| |||||| ||||| |||||| |||||
seq2  ATGGTGGACAACCGCCGACCCTTATTAATTCTGGCTTTTT  1139

seq1: chr5_151702969_151704050
seq2: B6Ng01-305N19.g_71_1146 (reverse)

seq1  GACTAGAAGAAGGAGAAAGTTCCCAGTTCAAAGGGCCAG-AAAATACCTT  49
      ||||||||||| |||||||||||||| ||||||| |||| ||||||| ||
seq2  GACTAGAAGAA-GAGAAAGTTCCCAGGTCAAAGGCCCAGAAAAATACTTT  49

seq1  CAACAAAATCACAGATGCTCAGGGGCATCTCTGGGATTCCAGTTTGTCCT  99
      ||||||||||||||||||||| ||||||||||||||||||||||||| ||
seq2  CAACAAAATCACAGATGCTCA-GGGCATCTCTGGGATTCCAGTTTGT-CT  97

seq1  TTTCTTTGCTGCCTTCATGGCTCAGCTGTCCTTGGTGTGTACCAAGATGG  149
      |||| ||||||||||||| |||||||||||||| ||||||||||||||||
seq2  TTTC-TTGCTGCCTTCAT-GCTCAGCTGTCCTT-GTGTGTACCAAGATGG  144

seq1  CCACCAGGGCTCCACACCTGAGAGACTGAACGATGCCTAATGGTAGAAGT  199
       |||||| |||||||| ||||||||||| |||||| ||||||||||||||
seq2  -CACCAGAGCTCCACA-CTGAGAGACTG-ACGATG-CTAATGGTAGAAGT  190

seq1  GTTCCTTCTTAAATTCTGTATCAGCAAGG-AACCAAAG-CTGTTCCCATC  247
      ||||||||||||||||||||||||||||| |||||||| |||||||||||
seq2  GTTCCTTCTTAAATTCTGTATCAGCAAGGAAACCAAAGACTGTTCCCATC  240

seq1  CAAGCCTCACACTGTGGCGTCTTCGACGATTTCTGTTGCTGT-AACTGAA  296
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAAGCCTCACACTGTGGCGTCTTCGACGATTTCTGTTGCTGTAAACTGAA  290

seq1  TACCAAGGGCCGAGATGTTTATAAGGAAGAGAGACCTCCATCATTCGTGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAGGGCCGAGATGTTTATAAGGAAGAGAGACCTCCATCATTCGTGG  340

seq1  TCCAGGAACCTCAGTGCCAGTGAGCAGGTCTTCTTTCCAGGCCACAGGAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAACCTCAGTGCCAGTGAGCAGGTCTTCTTTCCAGGCCACAGGAT  390

seq1  AGTCAGAGTGTCATACAGCACCACGGAAGAAGCTAGCAGGAGGAAGAAGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAGTGTCATACAGCACCACGGAAGAAGCTAGCAGGAGGAAGAAGC  440

seq1  TAGCAGGAGGAAGAAGCTAGCAGGAGGAAGAAGCTAGCAGGAGGAAGAAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGGAGGAAGAAGCTAGCAGGAGGAAGAAGCTAGCAGGAGGAAGAAG  490

seq1  CTAGCAGGAGGAAGAAGCTAGCAGGAGGAAGAAGCTAGCAGGAGGAAGCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAGGAGGAAGAAGCTAGCAGGAGGAAGAAGCTAGCAGGAGGAAGCT  540

seq1  CACTTCTACAAAGGCACTGCTTTAGGTACTCACAATCCATTCGTGTATTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTACAAAGGCACTGCTTTAGGTACTCACAATCCATTCGTGTATTG  590

seq1  GTCCATAGGTTCATCAAGGGAGGGCAGTCACTTCTTTGTCACTAAGTCCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATAGGTTCATCAAGGGAGGGCAGTCACTTCTTTGTCACTAAGTCCT  640

seq1  GTCACCAAAATATATTAACACACATCCCTGGGGATTACATTTTCGGTTTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCAAAATATATTAACACACATCCCTGGGGATTACATTTTCGGTTTT  690

seq1  GGTAGAGATAGACAAATCCTGGCACAATGGAAGGGGGTCAGGATTGCCAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGATAGACAAATCCTGGCACAATGGAAGGGGGTCAGGATTGCCAG  740

seq1  AATTGGCTTAAACGTGCCTTGCTACCCTTCACAGAACAGAAGCTGGGGCC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGCTTAAACGTGCCTTGCTACCCTTCACAGAACAGAAGCTGGGGCC  790

seq1  CCTCTCCCCTGAACCACTTGGTCCACGTGGATACAAAACCAAACCAAACA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCCTGAACCACTTGGTCCACGTGGATACAAAACCAAACCAAACA  840

seq1  ACCCGAGTCTCTCTGACACAGGTTGGTTGAATAGCTAAGGCACCAGACAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGAGTCTCTCTGACACAGGTTGGTTGAATAGCTAAGGCACCAGACAT  890

seq1  TCAAGTGTTGTAAGAGTTCCCACTCAGCAGCTTCAACTCTGGGGTGGGAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTGTTGTAAGAGTTCCCACTCAGCAGCTTCAACTCTGGGGTGGGAA  940

seq1  ACACTCCTGCTGCCAAGAAAAGATCATATCGGAAGCCAGGCTTGATGGTA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCCTGCTGCCAAGAAAAGATCATATCGGAAGCCAGGCTTGATGGTA  990

seq1  TGTGCCTTTAATCCCAGCACCCTGGGAGGCAGAGGCAGGTGGATCTCTGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTTTAATCCCAGCACCCTGGGAGGCAGAGGCAGGTGGATCTCTGT  1040

seq1  GAGTTTGTGGCCACGCCTGGTCTACAAAGTGAATTC  1082
      ||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGTGGCCACGCCTGGTCTACAAAGTGAATTC  1076