BAC Information

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BAC

Clone NameB6Ng01-306O19
Chromosome5 (Build37)
Map Location 73,053,190 - 73,054,280
singlet/doubletsinglet
Overlap geneNpal1
Upstream geneGabrb1, LOC666545, Commd8, Atp10d, Corin, Nfxl1, Zar1, EG545758, Cnga1, LOC384275
Downstream geneTxk, Tec, Slain2, Slc10a4, LOC667127, Fryl, Ociad1, Ociad2, LOC667154, LOC100042205, C130090K23Rik, LOC627733, Dcun1d4, BC031901, Sgcb, Spata18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306O19.bB6Ng01-306O19.g
ACCGA099832GA099833
length1,094212
definitionB6Ng01-306O19.b B6Ng01-306O19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttttttttaatttttaaaaagaagcatctcgagtaccttttc
cctaataaatgttgggagctaaaagggttgatatttaaatttgcagagcc
ctttctattttttaaggtgttttcatatccatttgctgaataaaagttga
ctggcctaccctgggaaggttctagtaaaaatgatctgagtgattttctt
actctgtgttcatgtcttacttgcatctcctcagccttccctcatgtttc
caaaggaaaatacaggggctggaatgatggctctatagttaagaccactt
gatgctcttgcagaggacccaagttcacgtctcagcacccacacggaggc
tcacaactatcttcaattccagttccaggggacctgaccatctcttctaa
cttccatgggcttcagacacccacaaaatgcccagatatacatacatgcc
aacacttgcatacatggagtaaaaacaaatcttaaaatgaaaatctaagg
agaaaattgtatggctatatttacaatgccatgtataccaagagaaaaaa
gcttgtgatcatatggataagaacttacactggggtgctatctggctatt
agcatatgaagttaaaatttgtgtagaacaacatctataaaaatagaaac
catctcaatataatgtcaccaaaggaactaaatagtctagaaagggtacc
acagcttgcttgcttgcttgcttgctttatttatttatttatttatgaga
gtagtctcctaatttgtctgtaaatttagatctgtctttatggtgctcta
atgctgggtattcaaagaaaaggaatatactctccactatgtgtttgcac
gttgcagttggacagcgtggaatactacaatctctggagatgtatcccat
tgcagtctctgagaataagctggcttccacacaaaagctagctcttgagg
ggagtctctgcactctgaaagttattttgcaatacagtacttggtgcaga
tctcaagtttctcagcctagattacatgtagcatccgttccttaggactt
tcaaaacagctcctcggcttttttcttgagctcctggagacacc
tgggagattttcccagggtctataaaggttagaaccctgatgggtgaagt
tgttggttgttcagggggttgttttctgtttgttagtaattgtgctcaaa
gaaaaaagaacaaggaacttagatgaaaaggtctttcttttttttctctc
tgttctctccttctttctctcccatctagtgttagggggtgaaacagggt
ggtggggataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_73053190_73054280
seq2: B6Ng01-306O19.b_49_1142

seq1  GAATTCATTTTTTTTTAATTTTTAAAAAGAAGCATCTCGAGTACCTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTTTTTTAATTTTTAAAAAGAAGCATCTCGAGTACCTTTTC  50

seq1  CCTAATAAATGTTGGGAGCTAAAAGGGTTGATATTTAAATTTGCAGAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATAAATGTTGGGAGCTAAAAGGGTTGATATTTAAATTTGCAGAGCC  100

seq1  CTTTCTATTTTTTAAGGTGTTTTCATATCCATTTGCTGAATAAAAGTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTATTTTTTAAGGTGTTTTCATATCCATTTGCTGAATAAAAGTTGA  150

seq1  CTGGCCTACCCTGGGAAGGTTCTAGTAAAAATGATCTGAGTGATTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTACCCTGGGAAGGTTCTAGTAAAAATGATCTGAGTGATTTTCTT  200

seq1  ACTCTGTGTTCATGTCTTACTTGCATCTCCTCAGCCTTCCCTCATGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTGTTCATGTCTTACTTGCATCTCCTCAGCCTTCCCTCATGTTTC  250

seq1  CAAAGGAAAATACAGGGGCTGGAATGATGGCTCTATAGTTAAGACCACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAAAATACAGGGGCTGGAATGATGGCTCTATAGTTAAGACCACTT  300

seq1  GATGCTCTTGCAGAGGACCCAAGTTCACGTCTCAGCACCCACACGGAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTCTTGCAGAGGACCCAAGTTCACGTCTCAGCACCCACACGGAGGC  350

seq1  TCACAACTATCTTCAATTCCAGTTCCAGGGGACCTGACCATCTCTTCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACTATCTTCAATTCCAGTTCCAGGGGACCTGACCATCTCTTCTAA  400

seq1  CTTCCATGGGCTTCAGACACCCACAAAATGCCCAGATATACATACATGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATGGGCTTCAGACACCCACAAAATGCCCAGATATACATACATGCC  450

seq1  AACACTTGCATACATGGAGTAAAAACAAATCTTAAAATGAAAATCTAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTGCATACATGGAGTAAAAACAAATCTTAAAATGAAAATCTAAGG  500

seq1  AGAAAATTGTATGGCTATATTTACAATGCCATGTATACCAAGAGAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTGTATGGCTATATTTACAATGCCATGTATACCAAGAGAAAAAA  550

seq1  GCTTGTGATCATATGGATAAGAACTTACACTGGGGTGCTATCTGGCTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGATCATATGGATAAGAACTTACACTGGGGTGCTATCTGGCTATT  600

seq1  AGCATATGAAGTTAAAATTTGTGTAGAACAACATCTATAAAAATAGAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATGAAGTTAAAATTTGTGTAGAACAACATCTATAAAAATAGAAAC  650

seq1  CATCTCAATATAATGTCACCAAAGGAAACTAAATAGTCTAGAAAGGGTAC  700
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CATCTCAATATAATGTCACCAAAGG-AACTAAATAGTCTAGAAAGGGTAC  699

seq1  CACAGCTTGCTTGCTTGCTTGCTTGCTTTATTTATTTATTTATTTATGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTTGCTTGCTTGCTTGCTTGCTTTATTTATTTATTTATTTATGAG  749

seq1  AGTAGTCTCCTAATTTGTCTGTAAATTTAGATCTGTCTTTATGGTGCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTCTCCTAATTTGTCTGTAAATTTAGATCTGTCTTTATGGTGCTCT  799

seq1  AATGCTGGGTATTCAAAGAAAAGGAATATACTCTCCACTATGTGTTTGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGGGTATTCAAAGAAAAGGAATATACTCTCCACTATGTGTTTGCA  849

seq1  CGTTGCAGTTGGACAGCGTGGAATACTACAATCTCTGGAGATGTATCCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGCAGTTGGACAGCGTGGAATACTACAATCTCTGGAGATGTATCCCA  899

seq1  TTGCAGTCTCTGAGAATAAGCTGGCTTCCACACAAAAGCTAGCTCTTGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTCTCTGAGAATAAGCTGGCTTCCACACAAAAGCTAGCTCTTGAG  949

seq1  GGGAGTCTCCTGCACTCTGAAAGTTA-TTTGCAATACAGTACTTGGTGCA  999
      |||||||| ||||||||||||||||| |||||||||||||||||||||||
seq2  GGGAGTCT-CTGCACTCTGAAAGTTATTTTGCAATACAGTACTTGGTGCA  998

seq1  GATCTCAAGTTTCTCAGCTAGGATTACATGTAGGCATCCG-TCCTTAGGA  1048
      ||||||||||||||||||   ||||||||||| ||||||| |||||||||
seq2  GATCTCAAGTTTCTCAGCCTAGATTACATGTA-GCATCCGTTCCTTAGGA  1047

seq1  CTTTC-AAACAGCTCCTCGGC--TCTTCTTGAGCTCCT-GAGACACC  1091
      ||||| |||||||||||||||  | ||||||||||||| ||||||||
seq2  CTTTCAAAACAGCTCCTCGGCTTTTTTCTTGAGCTCCTGGAGACACC  1094