BAC Information

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BAC

Clone NameB6Ng01-307F23
Chromosome5 (Build37)
Map Location 67,103,368 - 67,297,714
singlet/doubletdoublet
Overlap gene3732412D22Rik, LOC624662
Upstream gene1700022K14Rik, LOC384261, B3bp, LOC100041809, Rhoh, LOC626641, EG666827, Chrna9, 9130230L23Rik, BC013481, LOC626714, LOC666854, LOC100042394, Nsun7, Apbb2, Uchl1, LOC100041876
Downstream genePhox2b, Tmem33, Slc30a9, EG666938, C330024D21Rik, D830007B15Rik, Atp8a1, LOC100042458
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307F23.bB6Ng01-307F23.g
ACCGA100162GA100163
length3731,087
definitionB6Ng01-307F23.b B6Ng01-307F23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,103,368 - 67,103,740)(67,296,628 - 67,297,714)
sequence
actctgtagaccaggctggcctcgaactcagaaatccacttgcctctgcc
tcccaagtgctgggattaaaggtgagcgccaccaccgcccggcccagctg
agctcttaatattacatttcttgatctgggtacagtatacaggaatgtta
taatttatgatctgcacatgtgcacatatattgcacacacacacacacac
acacacacacacacacacacacacacacacaaacactccaagaaaagttg
atattgctgggaatgtatatgtttgtaactccagcactcaggattcagag
gcaggaagaattttttttttccttttttagtatagaatagagtttattta
gggcatgggagggggagttggga
gaattctttcctgaccccaggcatgagagactatcactcactggcttagt
gactgaatggccattaaatagaacggtggagaatcgacacctacaagtca
agatggagcagttttgtcttaagactgtacatgagcaagtgccaccggcc
aaagcgaagactgagagtttagacgacatggcggtagctgcccatcactc
tggctatgaacctctctcagttctctttgtttcccatccctgatgaaaac
tctctcagctactctctcctcatgctgacaaacaggaaaaagaaaagaaa
acacagtaccacctaacatctctcttacataatccatgcccctcctcgct
gcaaccccctaggaaaaactagaactcaaggggccttgatgcttttatca
atgccactcagtgtcaaggacaggaaataaaaatatgtttcttttccaac
tcaaatacaataccccttatgaagctgctttaaaaaaaaaagaaataact
agaaataaaagatttggggaatatttcaggtgagagatactcatcagaat
attccatttcactaaaaatatctccaagtttttcttagcccaagtttttc
ccactgcactgaacttgatcgtgattaatctgttttgctcctttgtagtg
gaaggaagctctgaagtcaccacaaaggaggtagctcctgagttgtcctg
tgggaccagagtccctgtgggcatgcatcaggccagagggttgttttcag
aacagaaacagggacaggtaggagagggaggagaataatgcaaatgactg
catccccatcacctggcaaccagagtttacatcaaagacccaggagggta
actttggcaagctgaggagtccctgggaggctacgcctaggatagcacaa
tgtccttgtcctctgccctagcacagataaatgaggcccttcacttggga
agcctaacccttgctgatgacaggcggaggtgacctagcattcagccgtg
agaagacactgggggggtttgtgtctaggtgggctccgacatcgcagctt
cactaaagaaagagtaggtacagtcaagagatgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_67103368_67103740
seq2: B6Ng01-307F23.b_50_422

seq1  ACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACTTGCCTCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACTTGCCTCTGCC  50

seq1  TCCCAAGTGCTGGGATTAAAGGTGAGCGCCACCACCGCCCGGCCCAGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGTGCTGGGATTAAAGGTGAGCGCCACCACCGCCCGGCCCAGCTG  100

seq1  AGCTCTTAATATTACATTTCTTGATCTGGGTACAGTATACAGGAATGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTAATATTACATTTCTTGATCTGGGTACAGTATACAGGAATGTTA  150

seq1  TAATTTATGATCTGCACATGTGCACATATATTGCACACACACACACACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTATGATCTGCACATGTGCACATATATTGCACACACACACACACAC  200

seq1  ACACACACACACACACACACACACACACACAAACACTCCAAGAAAAGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACAAACACTCCAAGAAAAGTTG  250

seq1  ATATTGCTGGGAATGTATATGTTTGTAACTCCAGCACTCAGGATTCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGCTGGGAATGTATATGTTTGTAACTCCAGCACTCAGGATTCAGAG  300

seq1  GCAGGAAGAATTTTTTTTTTCCTTTTTTAGTATAGAATAGAGTTTATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAGAATTTTTTTTTTCCTTTTTTAGTATAGAATAGAGTTTATTTA  350

seq1  GGGCATGGGAGGGGGAGTTGGGA  373
      |||||||||||||||||||||||
seq2  GGGCATGGGAGGGGGAGTTGGGA  373

seq1: chr5_67296628_67297714
seq2: B6Ng01-307F23.g_65_1151 (reverse)

seq1  CACACATCTC-TGACTGTCCCT-CTCTTTCCTTTAGTGGAGCTGTGATGT  48
      |||||||||| ||||||| ||| |||||| |||||||| ||||| |||||
seq2  CACACATCTCTTGACTGTACCTACTCTTT-CTTTAGTGAAGCTGCGATGT  49

seq1  CTGAGCCCACCCTAGACACCAAACCCCCCCAGTTGTCCTCCTTCACCGCT  98
      | ||||||| |||||||| ||||||||||||| |||| ||  |||| |||
seq2  CGGAGCCCA-CCTAGACA-CAAACCCCCCCAG-TGTCTTC--TCACGGCT  94

seq1  GAATGCTAGGTCAACCTCG-CTGTCATCAGCAA-GGTTAGGCTTCCCAAG  146
      ||||||||||||| |  || ||||||||||||| ||||||||||||||||
seq2  GAATGCTAGGTCACCTCCGCCTGTCATCAGCAAGGGTTAGGCTTCCCAAG  144

seq1  TGAAGGGCCTCATTTATCTGTGCTAGGGCAGAGGACAAGGACATTGTGCT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGCCTCATTTATCTGTGCTAGGGCAGAGGACAAGGACATTGTGCT  194

seq1  ATCCTAGGCGTAGCCT-CCAGGGACTCCTCAGCTTGCCAAAGTTA-CCTC  244
      |||||||||||||||| |||||||||||||||||||||||||||| ||||
seq2  ATCCTAGGCGTAGCCTCCCAGGGACTCCTCAGCTTGCCAAAGTTACCCTC  244

seq1  CTGGGTCTTTGATGTAAACTCTGGTTGCCAGGTGATGGGGATGCAGTCAT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTCTTTGATGTAAACTCTGGTTGCCAGGTGATGGGGATGCAGTCAT  294

seq1  TTGCATTATTCTCCTCCCTCTCCTACCTGTCCCTGTTTCTGTTCTGAAAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTATTCTCCTCCCTCTCCTACCTGTCCCTGTTTCTGTTCTGAAAA  344

seq1  CAACCCTCTGGCCTGATGCATGCCCACAGGGACTCTGGTCCCACAGGACA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCTCTGGCCTGATGCATGCCCACAGGGACTCTGGTCCCACAGGACA  394

seq1  ACTCAGGAGCTACCTCCTTTGTGGTGACTTCAGAGCTTCCTTCCACTACA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGAGCTACCTCCTTTGTGGTGACTTCAGAGCTTCCTTCCACTACA  444

seq1  AAGGAGCAAAACAGATTAATCACGATCAAGTTCAGTGCAGTGGGAAAAAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGCAAAACAGATTAATCACGATCAAGTTCAGTGCAGTGGGAAAAAC  494

seq1  TTGGGCTAAGAAAAACTTGGAGATATTTTTAGTGAAATGGAATATTCTGA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCTAAGAAAAACTTGGAGATATTTTTAGTGAAATGGAATATTCTGA  544

seq1  TGAGTATCTCTCACCTGAAATATTCCCCAAATCTTTTATTTCTAGTTATT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATCTCTCACCTGAAATATTCCCCAAATCTTTTATTTCTAGTTATT  594

seq1  TCTTTTTTTTTTAAAGCAGCTTCATAAGGGGTATTGTATTTGAGTTGGAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTTTTAAAGCAGCTTCATAAGGGGTATTGTATTTGAGTTGGAA  644

seq1  AAGAAACATATTTTTATTTCCTGTCCTTGACACTGAGTGGCATTGATAAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACATATTTTTATTTCCTGTCCTTGACACTGAGTGGCATTGATAAA  694

seq1  AGCATCAAGGCCCCTTGAGTTCTAGTTTTTCCTAGGGGGTTGCAGCGAGG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAAGGCCCCTTGAGTTCTAGTTTTTCCTAGGGGGTTGCAGCGAGG  744

seq1  AGGGGCATGGATTATGTAAGAGAGATGTTAGGTGGTACTGTGTTTTCTTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCATGGATTATGTAAGAGAGATGTTAGGTGGTACTGTGTTTTCTTT  794

seq1  TCTTTTTCCTGTTTGTCAGCATGAGGAGAGAGTAGCTGAGAGAGTTTTCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTCCTGTTTGTCAGCATGAGGAGAGAGTAGCTGAGAGAGTTTTCA  844

seq1  TCAGGGATGGGAAACAAAGAGAACTGAGAGAGGTTCATAGCCAGAGTGAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGATGGGAAACAAAGAGAACTGAGAGAGGTTCATAGCCAGAGTGAT  894

seq1  GGGCAGCTACCGCCATGTCGTCTAAACTCTCAGTCTTCGCTTTGGCCGGT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCTACCGCCATGTCGTCTAAACTCTCAGTCTTCGCTTTGGCCGGT  944

seq1  GGCACTTGCTCATGTACAGTCTTAAGACAAAACTGCTCCATCTTGACTTG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTGCTCATGTACAGTCTTAAGACAAAACTGCTCCATCTTGACTTG  994

seq1  TAGGTGTCGATTCTCCACCGTTCTATTTAATGGCCATTCAGTCACTAAGC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGTCGATTCTCCACCGTTCTATTTAATGGCCATTCAGTCACTAAGC  1044

seq1  CAGTGAGTGATAGTCTCTCATGCCTGGGGTCAGGAAAGAATTC  1087
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGTGATAGTCTCTCATGCCTGGGGTCAGGAAAGAATTC  1087