BAC Information

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BAC

Clone NameB6Ng01-310B12
Chromosome5 (Build37)
Map Location 9,267,748 - 9,268,839
singlet/doubletsinglet
Overlap gene9330182L06Rik
Upstream geneAdam22, Dbf4, Slc25a40, Gm440, Abcb1a, EG330031, Abcb1b, Abcb4, Crot, 4930420K17Rik, Dmtf1, LOC654361
Downstream geneGrm3, LOC100042768, LOC625446, LOC435832, LOC100041395, LOC381612
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310B12.bB6Ng01-310B12.g
ACCGA102166GA102167
length1,2091,108
definitionB6Ng01-310B12.b B6Ng01-310B12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgcccggggcccagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcatagggctccc
aatggaggagctagagaaagtagccaaggagctaaagggatctgcaaacc
ctataggtgaacaacattatgagctaacagtacccggagctcttgactct
agctgcatatatttttcaaagatggctagtcgggccatcactggaagaag
aggccattggacttgcaaccttatatgccaagttacagggtaatcccaag
gtccaaacggggagtggctggccaggggatgggtgtgtgagcacatccga
gtctatagc
gaattcaactttttggacatccacaactgttgtggcaagataagctttat
tgtccagttgcccagacacagtttatagcacacgtttctttaacgaagtg
aagttccaagttccttgcaacactaattcttagtagtgaagaattgaaga
ctatttttgaagtagaaaggtcaaggccactagaagagatgcatatatat
atatatatatacatatacgtatatatatgtatatatatttatacatacat
atatatatacatatatacatatatatatatatatatatatatatatatat
attcattctcttaacccaagctgggttcaaactccttatgtagctggtga
tgggtaatgagtttcttatcctcctgcctccataccccagttgctaggat
tacagatagaggtcaccacatccagtttatatagtggtgtggatgaaacc
tagggccccttttattctaagcaagcactctaccaactgagctacatccc
tatttctagactataatcatacagaactgaggcatgggggtgacagaatg
tacaagaaggcgatgctcatcccaattccagcctttcatcgacttggttt
tagaaatttgtatgtgatccacgcttttagatcttaatttttgatttttt
tccctttaaaaatgaaagaagataaaatctataggaggatgctcctgagt
cagcctctggctagtttgtttctagaaccagtaatacacagatctacgta
tgtttctccctgcagactgtaggcactgtgggttagagactccactggaa
agagaagaggcctcccacgggcataagcataagctggattgtccataccc
aggctagtcagctgagctaatttgtattcttgatcattggtttcaatcta
ccattattttgaagagaaaatgagggggtaaatgattctcaggcttgcgg
gttaagacttcctgttctgggcatgtgaggatattaggggaatccatctt
gagcttaaccaggttcctctgcagagattgctatggactatgaatattaa
ggagatataagggcgccatttcctctggcttattatgatgggattaacac
cacttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_9267748_9268839
seq2: B6Ng01-310B12.g_74_1181

seq1  GAATTCAACTTTTTGGACATCCACAACTGTTGTGGCAAGATAAGCTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTTTTGGACATCCACAACTGTTGTGGCAAGATAAGCTTTAT  50

seq1  TGTCCAGTTGCCCAGACACAGTTTATAGCACACGTTTCTTTAACGAAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGTTGCCCAGACACAGTTTATAGCACACGTTTCTTTAACGAAGTG  100

seq1  AAGTTCCAAGTTCCTTGCAACACTAATTCTTAGTAGTGAAGAATTGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCAAGTTCCTTGCAACACTAATTCTTAGTAGTGAAGAATTGAAGA  150

seq1  CTATTTTTGAAGTAGAAAGGTCAAGGCCACTAGAAGAGATGCATATATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTGAAGTAGAAAGGTCAAGGCCACTAGAAGAGATGCATATATAT  200

seq1  ATATATATATACATATACGTATATATATGTATATATATTTATACATACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATACATATACGTATATATATGTATATATATTTATACATACAT  250

seq1  ATATATATACATATATAC--ATATATATATATATATATATATATATATAT  298
      ||||||||||||||||||  ||||||||||||||||||||||||||||||
seq2  ATATATATACATATATACATATATATATATATATATATATATATATATAT  300

seq1  ATTCATTCTCTTAACCCAAGCTGGGTTCAAACTCCTTATGTAGCTGGTGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTCTCTTAACCCAAGCTGGGTTCAAACTCCTTATGTAGCTGGTGA  350

seq1  TGGGTAATGAGTTTCTTATCCTCCTGCCTCCATACCCCAGTTGCTAGGAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAATGAGTTTCTTATCCTCCTGCCTCCATACCCCAGTTGCTAGGAT  400

seq1  TACAGATAGAGGTCACCACATCCAGTTTATATAGTGGTGTGGATGAAACC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATAGAGGTCACCACATCCAGTTTATATAGTGGTGTGGATGAAACC  450

seq1  TAGGGCCCCTTTTATTCTAAGCAAGCACTCTACCAACTGAGCTACATCCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCCCCTTTTATTCTAAGCAAGCACTCTACCAACTGAGCTACATCCC  500

seq1  TATTTCTAGACTATAATCATACAGAACTGAGGCATGGGGGTGACAGAATG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTAGACTATAATCATACAGAACTGAGGCATGGGGGTGACAGAATG  550

seq1  TACAAGAAGGCGATGCTCATCCCAATTCCAGCCTTTCATCGACTTGGTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGAAGGCGATGCTCATCCCAATTCCAGCCTTTCATCGACTTGGTTT  600

seq1  TAGAAA-TTGTATGTGATCCACGCTTTTAGATCTTAA-TTTTGATTTTTT  646
      |||||| |||||||||||||||||||||||||||||| ||||||||||||
seq2  TAGAAATTTGTATGTGATCCACGCTTTTAGATCTTAATTTTTGATTTTTT  650

seq1  TCCCTTTAAAAATGAAAGAAGATAAAATCTATAGGAGGATGCTCCTGAGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTAAAAATGAAAGAAGATAAAATCTATAGGAGGATGCTCCTGAGT  700

seq1  CAGCCTCTGGCTAGTTTGTTTCTAGAACCAGTAATACACAGATCTACGTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCTGGCTAGTTTGTTTCTAGAACCAGTAATACACAGATCTACGTA  750

seq1  TG-TTCTCCCTGCAGACTGTAGGCACTGTGGGTTAGAGACTCCACTGGAA  795
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCCCTGCAGACTGTAGGCACTGTGGGTTAGAGACTCCACTGGAA  800

seq1  AGAGAAGAGGCCTCCCACGGGCATAAGCATAAGCT-GATTGTCCATACCC  844
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGAGAAGAGGCCTCCCACGGGCATAAGCATAAGCTGGATTGTCCATACCC  850

seq1  AGGCTAGTCAGCTGAGCTAATTTGTATTCTTGATCATT-GTTTCAATCTA  893
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGGCTAGTCAGCTGAGCTAATTTGTATTCTTGATCATTGGTTTCAATCTA  900

seq1  CCATTATTTTGAAGAGGAAAATGAGGGGGTAAATGATTCTCAGGCTTTGC  943
      ||||||||||||||| ||||||||||||||||||||||||||||| ||||
seq2  CCATTATTTTGAAGA-GAAAATGAGGGGGTAAATGATTCTCAGGC-TTGC  948

seq1  GGGTAAGGACTTCCTGTTCTGGGCATGTGAGGATA-TAGGGG-ATCCATC  991
      |||| | |||||||||||||||||||||||||||| |||||| |||||||
seq2  GGGTTAAGACTTCCTGTTCTGGGCATGTGAGGATATTAGGGGAATCCATC  998

seq1  TTGAGCTT-AGCAAGTTCCTCTG-AGAGATAGCTATTGGACTATG-ATAA  1038
      |||||||| | || ||||||||| |||||| |||| ||||||||| ||| 
seq2  TTGAGCTTAACCAGGTTCCTCTGCAGAGATTGCTA-TGGACTATGAATAT  1047

seq1  TAAGGAGA-ATAAAGCAGCCATT---TCTTGTCTATTATGATGG--TTTA  1082
      |||||||| |||| |  ||||||   ||| |  |||||||||||  || |
seq2  TAAGGAGATATAAGGGCGCCATTTCCTCTGGCTTATTATGATGGGATTAA  1097

seq1  -ACCACTTGTT  1092
       ||||||||||
seq2  CACCACTTGTT  1108