BAC Information

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BAC

Clone NameB6Ng01-315F17
Chromosome5 (Build37)
Map Location 42,832,434 - 42,833,584
singlet/doubletsinglet
Overlap genenone
Upstream geneRab28, Bapx1, A230054D04Rik, LOC384308, LOC100040588
Downstream geneEG636612, LOC433883, EG665934, Cpeb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315F17.bB6Ng01-315F17.g
ACCGA106030GA106031
length4431,153
definitionB6Ng01-315F17.b B6Ng01-315F17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgtatgtgttggatattagccctctatcagatgtaggattagtaaaga
tcttttcccaatcttttggttgctattttgtcttattgacagtgtccttt
gccttacagaagctttgcaattttatgaggtcccttttgttaattcttga
tcttacagcatgtcatttgtgttgtgtttaggaaaatttcccctgtaccc
atgtgttccagactcttccctactttctattctactaatttcagtgtatc
tggttttatggggaggtactttattgatttgaacttgaactttgtacaag
gagataagaatagatcaatttgcattctacatattgactggaagttgaac
cagcaccatttgctgaaaatgctgtcttttttccactagttggtatttgc
tcctttatcaaagatcaagtgaccataggtgtgtgggttcatt
gaattctttttagttctttgtcccttgaacatcaataattcttttcacac
tttcctattatcatttttgtatccattcttaattattcatgaattttgag
tcatagttacaaagtattttttcactcatagtgggactgcaattccatgc
attcattctcgaatgcaccttaagctttttcttgtgtatagtgtgagata
taagtttatttctacattttttcccaaatggctactcaattcttctagcg
ccatttagtctaaactggtctggagtttttcttgactattgagtcaaatt
tctgcttcatggtgcttatttttaagagaagcaaggtcttagactttagt
tttgtttttagaatacagtttacatatccaacaaaaaacttttgtccttt
tggatttgtcaagggaaactgctggaaaataatgcatgtttcaatgtgca
acatagtatgatcaggcatgtgttttttaacatataatggaaactccttt
ccatttacaatggaggtgaaagccactactcaatcttagaaggccaagtt
tcccatttgttgatattgctaatttcattattcaattattccttcctgta
tattagcatatgtatatgatatatgtgcacatatatgtcatacacacaga
cacacatagacacagacagacagacagacagacagacacacacacacaca
cacacacacacacacatacacatacacaataaccccagaaatgtacaatg
acattcatattactggcaataatttaagtatttactaactcctttgatag
taaaataatagaaaaataatggtatattattgtgaaatcatatcaagttg
gggtttgtggtagctgtcataacaagctactaggcattaaacacccgttt
atcaatcacattttgataacaaggctcatagttatgaaagcacgttttca
atgtgtatcaaattagtctcaatggttgtctctactattatataagataa
tatataatactctattgtgctagattattttatttttatgtaacctattt
gtttgttttttataaattggtgaaaatataatataatttcctaaaagtaa
tgttcagttagccttgtggcaaagaaccaatagtagcaaaatatagctgg
cct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_42832434_42833584
seq2: B6Ng01-315F17.g_66_1218

seq1  GAATTCTTTTTAGTTCTTTGTCCCTTGAACATCAATAATTCTTTTCACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTAGTTCTTTGTCCCTTGAACATCAATAATTCTTTTCACAC  50

seq1  TTTCCTATTATCATTTTTGTATCCATTCTTAATTATTCATGAATTTTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTATTATCATTTTTGTATCCATTCTTAATTATTCATGAATTTTGAG  100

seq1  TCATAGTTACAAAGTATTTTTTCACTCATAGTGGGACTGCAATTCCATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTTACAAAGTATTTTTTCACTCATAGTGGGACTGCAATTCCATGC  150

seq1  ATTCATTCTCGAATGCACCTTAAGCTTTTTCTTGTGTATAGTGTGAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTCTCGAATGCACCTTAAGCTTTTTCTTGTGTATAGTGTGAGATA  200

seq1  TAAGTTTATTTCTACATTTTTTCCCAAATGGCTACTCAATTCTTCTAGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTATTTCTACATTTTTTCCCAAATGGCTACTCAATTCTTCTAGCG  250

seq1  CCATTTAGTCTAAACTGGTCTGGAGTTTTTCTTGACTATTGAGTCAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTAGTCTAAACTGGTCTGGAGTTTTTCTTGACTATTGAGTCAAATT  300

seq1  TCTGCTTCATGGTGCTTATTTTTAAGAGAAGCAAGGTCTTAGACTTTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCATGGTGCTTATTTTTAAGAGAAGCAAGGTCTTAGACTTTAGT  350

seq1  TTTGTTTTTAGAATACAGTTTACATATCCAACAAAAAACTTTTGTCCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTAGAATACAGTTTACATATCCAACAAAAAACTTTTGTCCTTT  400

seq1  TGGATTTGTCAAGGGAAACTGCTGGAAAATAATGCATGTTTCAATGTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTGTCAAGGGAAACTGCTGGAAAATAATGCATGTTTCAATGTGCA  450

seq1  ACATAGTATGATCAGGCATGTGTTTTTTAACATATAATGGAAACTCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGTATGATCAGGCATGTGTTTTTTAACATATAATGGAAACTCCTTT  500

seq1  CCATTTACAATGGAGGTGAAAGCCACTACTCAATCTTAGAAGGCCAAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTACAATGGAGGTGAAAGCCACTACTCAATCTTAGAAGGCCAAGTT  550

seq1  TCCCATTTGTTGATATTGCTAATTTCATTATTCAATTATTCCTTCCTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTTGTTGATATTGCTAATTTCATTATTCAATTATTCCTTCCTGTA  600

seq1  TATTAGCATATGTATATGATATATGTGCACATATATGTCATACACACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGCATATGTATATGATATATGTGCACATATATGTCATACACACAGA  650

seq1  CACACATAGACACAGACAGACAGACAGACAGACAGACACACACACACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATAGACACAGACAGACAGACAGACAGACAGACACACACACACACA  700

seq1  CACACACACACACACATACACATACACAATAACCCCAGAAATGTACAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACATACACATACACAATAACCCCAGAAATGTACAATG  750

seq1  ACATTCATATTACTGGCAATAATTTAAGTATTTACTAACTCCTTTGATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCATATTACTGGCAATAATTTAAGTATTTACTAACTCCTTTGATAG  800

seq1  TAAAATAATAGAAAAATAATGGTATATTATTGTGAAATCATATCAAGTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAATAGAAAAATAATGGTATATTATTGTGAAATCATATCAAGTTG  850

seq1  GGGTTTGTGGTAGCTGTCATAACAAGCTACTAGGCATTAAACACCCGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGTGGTAGCTGTCATAACAAGCTACTAGGCATTAAACACCCGTTT  900

seq1  ATCAATCACATTTTGATAACAAGGCTCATAGTTATGAAAGCACGTTTTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCACATTTTGATAACAAGGCTCATAGTTATGAAAGCACGTTTTCA  950

seq1  ATGTGTATCAAATTAGTCTCATTGGTTGTCTCTACTATTATATAAGATAT  1000
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  ATGTGTATCAAATTAGTCTCAATGGTTGTCTCTACTATTATATAAGATAA  1000

seq1  ATTATAATACTCTATTGTGCTAGATTATTTTATTTTTATGT-ACCTATTT  1049
        ||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TATATAATACTCTATTGTGCTAGATTATTTTATTTTTATGTAACCTATTT  1050

seq1  GTTTG-TTTTTATAATTTGGTGAAAATATAATATTAATTCCCTAAAGTAA  1098
      ||||| ||||||||| ||||||||||||||||| ||||| ||||||   |
seq2  GTTTGTTTTTTATAAATTGGTGAAAATATAATA-TAATTTCCTAAAAGTA  1099

seq1  ATGTTTCAG-TAG-CTTGTG--CAAGAACACATAGTTAGCAAAATATAGC  1144
      ||| ||||| ||| ||||||   ||||||  |||| ||||||||||||| 
seq2  ATG-TTCAGTTAGCCTTGTGGCAAAGAACCAATAG-TAGCAAAATATAG-  1146

seq1  CTGGCCT  1151
      |||||||
seq2  CTGGCCT  1153