BAC Information

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BAC

Clone NameB6Ng01-317M24
Chromosome5 (Build37)
Map Location 42,734,456 - 42,735,001
singlet/doubletsinglet
Overlap genenone
Upstream geneRab28, Bapx1, A230054D04Rik, LOC384308, LOC100040588
Downstream geneEG636612, LOC433883, EG665934, Cpeb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317M24.bB6Ng01-317M24.g
ACCGA107865GA107866
length879956
definitionB6Ng01-317M24.b B6Ng01-317M24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttaagctctgcaccccgttttttaatggggttatttgatt
ttttggagttcaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtgcctt
tttgtcttattgaaggtgtcttttgccttataaaaactttgcaattttat
gcaattttatttgtcaattctctatcttacagcacaagccattgctgttc
tattcaggattttttttcccctgagcccatatcttccaggcttttcccca
ctttagcctctataagtttcaatgtctctggttttatgtggagctccttg
atccacttagatttgaccttagtacaaggagataggaatggatcaattct
catacttctacatgataaccacaagttgtgccagcaccatttgttgaaac
tgctgtcttttttccactgcatggatttagctctcttgttaaagatcacg
tgaccataggtgtgtgggttcatttctgggtcttcaattatattccattg
gtctacttgatccctttgatcttcttttgttgtcgaattgctctggctag
gacttcaagtacaatgttgaataggtagggagaaagtgggcagcctggtc
tagtccctgattttagtgtaaatgctttcagtttttcaccatttactttg
atgttggctactgatttgctgtagattgcttttatcatgtttaggtatgg
gccttgaattcctgatctttccaagacttttatcatgaatgggtgttgga
ttttgtcaaatgctttctcaacatcaaaatacgatgatcatgtggttttt
gtgtttgaagtttgtgtatataatggatt

gaattcagatacccttctgctcaaatcttccttttgagacaaatgattgt
tgtgaattggttctaatgctttgtctgaatttggcttctaaacctgaggg
tccctaccctcagctggctttgatttgtattaaaattgctgtacagccaa
tgtctaggcaaggagacggaggtgggacttttaaattgcactggcaaggg
actgagagatggggaaagaacaggagattcatgatttggaggtagaggga
tcagatttaagagctgtgggtgagagaccatccagcaatgtaggtgtaaa
ggaaatgtggctctatcggaggctgactagaaggtaacagggcagcaaag
atagaatatgcatttagaagatgttaagccaggaataccggtgggaatgt
atgctaaccaggggcaggtttagaagtgcctagcccttgagctactcagg
gcatatcaaaattagctggcatgtgtgtctttcattcacaaatctgagct
tttgggcacattcagcactcacacaaccgacctgccaggaaactaatcag
tttaactaactcacctttacagatgcttttctagctcaatttgaaaatca
agatttcaggcatcttccaggggcctaagacaagttacagaaaggaatcc
tgccctggctgagatctcagacacccatagagtcttggctcttttctcca
ttatgtcttcctcaggtagggtttccttgtttcagcagcttctctcagtt
gccagatctgtctgagagagagggagcttgcaggtgagcatgcagatgtc
tgctatttagatttatgggatgcaggatcaagtccccaaagaagcagatt
aatcacaagaagttatttttccttttaattaaatgtattatcaataatga
ctctggtcgtgatgattttcagagcagacatatggggtaaggcatagcat
ggtgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_42734456_42735001
seq2: B6Ng01-317M24.g_68_613 (reverse)

seq1  TTAGTTTCCTGGCAGGTCGGTTGTGTGAGTGCTGAATGTGCCCAAAAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTCCTGGCAGGTCGGTTGTGTGAGTGCTGAATGTGCCCAAAAGCT  50

seq1  CAGATTTGTGAATGAAAGACACACATGCCAGCTAATTTTGATATGCCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTGTGAATGAAAGACACACATGCCAGCTAATTTTGATATGCCCTG  100

seq1  AGTAGCTCAAGGGCTAGGCACTTCTAAACCTGCCCCTGGTTAGCATACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTCAAGGGCTAGGCACTTCTAAACCTGCCCCTGGTTAGCATACAT  150

seq1  TCCCACCGGTATTCCTGGCTTAACATCTTCTAAATGCATATTCTATCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCGGTATTCCTGGCTTAACATCTTCTAAATGCATATTCTATCTTT  200

seq1  GCTGCCCTGTTACCTTCTAGTCAGCCTCCGATAGAGCCACATTTCCTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCCTGTTACCTTCTAGTCAGCCTCCGATAGAGCCACATTTCCTTTA  250

seq1  CACCTACATTGCTGGATGGTCTCTCACCCACAGCTCTTAAATCTGATCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTACATTGCTGGATGGTCTCTCACCCACAGCTCTTAAATCTGATCCC  300

seq1  TCTACCTCCAAATCATGAATCTCCTGTTCTTTCCCCATCTCTCAGTCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTCCAAATCATGAATCTCCTGTTCTTTCCCCATCTCTCAGTCCCT  350

seq1  TGCCAGTGCAATTTAAAAGTCCCACCTCCGTCTCCTTGCCTAGACATTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTGCAATTTAAAAGTCCCACCTCCGTCTCCTTGCCTAGACATTGG  400

seq1  CTGTACAGCAATTTTAATACAAATCAAAGCCAGCTGAGGGTAGGGACCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACAGCAATTTTAATACAAATCAAAGCCAGCTGAGGGTAGGGACCCT  450

seq1  CAGGTTTAGAAGCCAAATTCAGACAAAGCATTAGAACCAATTCACAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTAGAAGCCAAATTCAGACAAAGCATTAGAACCAATTCACAACAA  500

seq1  TCATTTGTCTCAAAAGGAAGATTTGAGCAGAAGGGTATCTGAATTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGTCTCAAAAGGAAGATTTGAGCAGAAGGGTATCTGAATTC  546


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