MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-318J22
Chromosome	5 (Build37)
Map Location	52,034,912 - 52,035,953
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100041015, LOC242987, EG624734, LOC666265, LOC100041059, Ppargc1a
Downstream gene	Dhx15, Sod3, Gm447, LOC100041805, Lgi2, LOC545750, D5Ertd135e
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041015 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041015
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC242987 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:242987
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG624734 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624734 MGI:3648949
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC666265 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666265
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins pseudo : _no_value

name	LOC100041059 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041059
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Ppargc1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19017 MGI:1342774
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dhx15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13204 MGI:1099786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Sod3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20657 MGI:103181
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm447 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242997 MGI:2685293
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041805 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041805
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Lgi2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:246316 MGI:2180196
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545750 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545750
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 99 ESTs, 5 Proteins pseudo : _no_value

name	D5Ertd135e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211006 MGI:1098791
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppargc1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679432 GeneID:19017 MGI:1342774
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxisome proliferative activated receptor, gamma, coactivator 1 alpha transcript_id : NM_008904.1

name	Dhx15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110835722 GeneID:13204 MGI:1099786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAH (Asp-Glu-Ala-His) box polypeptide 15 transcript_id : NM_007839.2

name	Dhx15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110835725 GeneID:13204 MGI:1099786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAH (Asp-Glu-Ala-His) box polypeptide 15 transcript_id : NM_001042620.1

name	Sod3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86439990 GeneID:20657 MGI:103181
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : superoxide dismutase 3, extracellular transcript_id : NM_011435.3

name	Gm447 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56118956 GeneID:242997 MGI:2685293
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 447, (NCBI) transcript_id : NM_001007590.2

name	LOC100041805 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253914 GeneID:100041805
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041805 transcript_id : XM_001477739.1

name	Lgi2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130076 GeneID:246316 MGI:2180196
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine-rich repeat LGI family, member 2 transcript_id : NM_144945.2

name	D5Ertd135e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803314 GeneID:211006 MGI:1098791
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 5, ERATO Doi 135, expressed transcript_id : NM_172490.2

name	Ppargc1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679433 CCDS:CCDS19282.1 GeneID:19017 MGI:1342774
definition	GO_component : GO:0005665 - DNA-directed RNA polymerase II, core complex [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence ISS] [Evidence IDA]; GO:0030374 - ligand-dependent nuclear receptor transcription coactivator activity [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] [Evidence ISS]; GO:0016455 - RNA polymerase II transcription mediator activity [Evidence ISS]; GO:0003713 - transcription coactivator activity [Evidence IPI] [Evidence IDA]; GO:0008134 - transcription factor binding [Evidence ISS]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0050873 - brown fat cell differentiation [Evidence ISS]; GO:0001678 - cell glucose homeostasis [Evidence ISS]; GO:0045333 - cellular respiration [Evidence ISS]; GO:0007586 - digestion [Evidence ISS]; GO:0006118 - electron transport [Evidence IDA]; GO:0019395 - fatty acid oxidation [Evidence ISS]; GO:0006094 - gluconeogenesis [Evidence ISS]; GO:0007005 - mitochondrion organization and biogenesis [Evidence ISS]; GO:0006397 - mRNA processing [Evidence ISS]; GO:0046321 - positive regulation of fatty acid oxidation [Evidence ISS]; GO:0045722 - positive regulation of gluconeogenesis [Evidence ISS]; GO:0035066 - positive regulation of histone acetylation [Evidence ISS]; GO:0045941 - positive regulation of transcription [Evidence IDA]; GO:0006461 - protein complex assembly [Evidence ISS]; GO:0050821 - protein stabilization [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0042594 - response to starvation [Evidence ISS]; GO:0008380 - RNA splicing [Evidence ISS]; GO:0001659 - thermoregulation [Evidence ISS]; GO:0006350 - transcription [Evidence IEA]; GO:0006367 - transcription initiation from RNA polymerase II promoter [Evidence ISS] codon_start : 1 note : PPAR Gamma Coactivator-1; Pgc-1alphaa; PPAR gamma coactivator variant form product : peroxisome proliferative activated receptor, gamma, coactivator 1 alpha protein_id : NP_032930.1

name	Dhx15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110835723 GeneID:13204 MGI:1099786
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005689 - minor (U12-dependent) spliceosome complex [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0008380 - RNA splicing [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 15 (RNA helicase A) product : DEAH (Asp-Glu-Ala-His) box polypeptide 15 isoform 2 protein_id : NP_031865.2

name	Dhx15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110835726 GeneID:13204 MGI:1099786
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005689 - minor (U12-dependent) spliceosome complex [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0008380 - RNA splicing [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 15 (RNA helicase A) product : DEAH (Asp-Glu-Ala-His) box polypeptide 15 isoform 1 protein_id : NP_001036085.1

name	Sod3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755600 CCDS:CCDS19283.1 GeneID:20657 MGI:103181
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0016209 - antioxidant activity [Evidence IEA]; GO:0005507 - copper ion binding [Evidence IEA]; GO:0004785 - copper, zinc superoxide dismutase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004784 - superoxide dismutase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0001666 - response to hypoxia [Evidence IMP]; GO:0006801 - superoxide metabolism [Evidence IEA] codon_start : 1 product : superoxide dismutase 3, extracellular protein_id : NP_035565.1

name	Gm447 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56090511 GeneID:242997 MGI:2685293
definition	codon_start : 1 product : hypothetical protein LOC433886 protein_id : NP_001007591.1

name	LOC100041805 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253915 GeneID:100041805
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477789.1

name	Lgi2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450363 CCDS:CCDS19285.1 GeneID:246316 MGI:2180196
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : leucine-rich repeat LGI family, member 2 protein_id : NP_659194.1

name	D5Ertd135e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369676 CCDS:CCDS19286.1 GeneID:211006 MGI:1098791
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0000049 - tRNA binding [Evidence IDA] GO_process : GO:0001514 - selenocysteine incorporation [Evidence IDA] codon_start : 1 product : DNA segment, Chr 5, ERATO Doi 135, expressed protein_id : NP_766078.1

name	LOC100041015 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041015
definition	number : 1 pseudo : _no_value

name	LOC100041015 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041015
definition	number : 2 pseudo : _no_value

name	LOC242987 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:242987
definition	number : 1 pseudo : _no_value

name	LOC242987 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:242987
definition	number : 2 pseudo : _no_value

name	EG624734 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624734
definition	number : 1 pseudo : _no_value

name	EG624734 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624734
definition	number : 2 pseudo : _no_value

name	LOC100041059 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041059
definition	number : 1 pseudo : _no_value

name	LOC666265 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253881 GeneID:666265
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins product : similar to ribosomal protein L21 pseudo : _no_value transcript_id : XR_032388.1

name	LOC545750 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253919 GeneID:545750
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 99 ESTs, 5 Proteins product : similar to solute carrier family 35, member A4 pseudo : _no_value transcript_id : XR_033380.1

clone name	MSMg01-081E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170P11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-419D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253B16
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-318J22.b	B6Ng01-318J22.g
ACC	GA108461	GA108462
length	1,050	1,152
definition	B6Ng01-318J22.b	B6Ng01-318J22.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctcacccttgtcttgatccaatagttttgcccccacctcttctga cgttctattttattcattttgaaattcagttactcttgtccaacccttgg ccttcctttcctcatttctttatggcctcaaagaaaactactctaagagt ctgctgccagcctctctgtgattaaacaaatccgaacaaagcaaaacaga actgattataaacatgagatgctgataacatttaaaaataattcacatgg agaagcctcacaaatttccagcacatctgcatacaacaggacctaggacc ttggctactagtatccttggtgaggtttgaacctgtgccctttctctttc tgaaaccctctgcctcacccttactcctctctgtagttaacgatgatgct agttctgccctccaggaccagttttcttttacccattctagtttccctcc tgtgcccagttggtcccagtagcttccagaagagacgtagaggggaatgt ctcagcagtcatttctctgtgttcttcttccttggttggctctggtattt tatgttaccgtgtaagctgaaaaggaaactgcacatatgtgaagctgttt atttatttttttgtttgtatgccagcaatatgacaaaatgatgatatcca gaggatgcaggtccttggttcttgacttgtgtgtcaattatacacacaca cacacacacacacacacacacacacacacacacacacactcacacacaca gtgttttgggaaggaggttggctatacaaaatgaaatccaatgaccagaa cctcgagtgacttgtagagggaaggtgattttaaaccacaggtagggaac taaggacaataagcagacagataatattcctaacatatgagtttgggggg gacataaagactaagctgctaattcctccctcctttgttggctagtggtt tgaattaagccacaggaactgatgctgggctattattaatcaagggagcc catgataagctctggagaatgtcagaataaaaaagaaatgggcagaaaaa	gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcttca gaaaactggacatagtaccaccggaggatccagcaatacctctcctgggc atatatccagaagatgccccaactggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacctagat gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa gaaactcacacaatatgtactcactgataagtggatattagccccaaacc taggatacccaagatataagatataatttgctaaacacatgaaactcaag aagaatgaagactgaagtgtggacactatgcccctccttagatttgggag caaaacacccatggaaggagttacagagacaaagtttggagctgagatga aaggatggaccatgtagagactgccatatccagggatccaccccataatc agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa ggacccagatgtagctgtctcttgtgagactatgcccgggcctaggcaaa cacagaaagtggatgctcacagtcagctaatgggatggatcatagggctc ccaatggaggagctagagaaagtagccaaagaagctaagggatctgcaac cctatagtggacaacatatgactaccagtaccccggaggcttcttgactc tagctgcatattttatcaaaggatgctagttcggccaattcacttggaag agaagtcatgatcttgcgaccttatatgtgctctcagtatcaagggggaa tc
quality values	Open. Hide. 58 31 23 35 58 58 54 41 23 47 62 62 62 62 62 62 62 62 62 62 39 47 62 41 24 62 62 62 62 62 56 56 43 35 62 62 49 49 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 59 62 59 49 62 62 62 62 62 62 62 54 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 46 34 62 62 62 50 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 54 58 58 58 54 58 49 58 58 54 58 58 58 54 58 58 54 58 58 52 54 58 58 54 58 58 58 58 58 54 54 58 58 39 58 51 54 42 58 58 58 52 54 46 58 58 58 58 54 42 58 54 58 58 58 58 52 58 58 53 58 58 54 58 58 58 58 58 58 58 58 58 58 51 54 50 50 54 58 58 47 50 58 51 58 58 58 50 58 58 58 49 58 53 53 58 58 51 39 41 58 58 50 51 53 58 51 54 50 44 41 58 52 58 51 58 58 46 58 58 58 58 58 58 51 49 58 44 43 49 53 54 58 58 50 54 46 58 49 54 58 54 51 58 54 52 58 58 54 52 58 58 41 41 58 58 53 51 58 58 58 58 58 58 49 51 58 53 46 42 41 51 50 44 43 40 36 44 37 51 51 50 41 51 37 37 33 50 58 50 42 54 54 37 54 37 35 49 53 40 44 37 42 54 19 51 30 25 50 52 39 32 54 45 49 50 40 44 50 49 29 32 42 45 50 51 52 37 39 54 52 52 54 53 53 45 34 37 28 38 54 37 51 45 53 54 54 54 54 49 54 52 54 52 52 45 42 27 47 54 54 49 54 49 49 44 54 54 54 46 51 53 53 47 44 40 40 40 40 40 38 47 47 47 47 40 46 36 45 33 30 26 32 53 52 53 32 53 42 47 34 32 45 21 51 31 53 52 32 42 47 18 14 38 12 32 22 10 29 17 17 9 21 23 30 30 45 30 33 30 46 51 32 31 42 31 51 42 39 31 30 20 43 30 43 29 21 32 30 31 46 31 30 26 31 31 28 33 31 38 42 26 17 27 38 31 31 38 25 32 31 48 31 31 10 9 46 27 32 21 8 47 46 29 14 46 24 28 30 21 32 10 4 9 28 27 38 48 25 23 22 23 25 11 17 6 39 30 21 19 18 27 11 21 21 27 37 31 39 25 27 23 30 18 28 32 15 17 27 29 22 30 12 17 9 18 13 32 24 29 25 38 18 25 44 26 26 36 41 36 41 28 27 26 18 11 15 23 44 44 29 31 26 14 10 24 18 31 31 31 30 34 32 29 30 17 13 7 14 25 36 9 19 22 32 9 40 11 22 18 8 30 18 25 34 34 32 8 6 4 4 13 13 24 25 16 14 14 17 22 25 22 31 18 19 16 11 10 25 23 25 22 21 21 22 31 28 18 10 30 13 24 28 8 7 17 24 20 21 15 7 23 28 14 11 12 13 13 3 8 16 24 9 11 20 28 29 18 15 23 13 15 13 17 18 14 5 3 8 21 15 4 5 5 25 13 13 24 28 5 11 28 28 34 16 6 16 6 34 16 12 10 28 10 7 2 1 6 17 17 27 23	Open. Hide. 62 47 43 38 62 62 62 54 56 54 62 62 43 21 25 46 35 44 42 62 47 62 62 54 62 62 62 62 62 62 62 59 59 59 62 62 62 59 59 62 62 62 59 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 49 49 49 43 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 54 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 49 54 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 44 62 47 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 44 62 62 62 54 49 62 62 62 62 46 62 62 62 62 62 62 62 62 54 42 62 62 62 46 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 54 58 58 58 58 58 58 52 58 52 58 58 58 58 58 58 58 54 58 58 54 58 58 58 58 54 58 58 58 54 54 54 58 58 58 58 54 58 47 42 58 58 58 46 58 54 52 58 58 58 58 58 54 58 54 52 52 54 58 58 45 34 58 58 58 58 58 43 48 58 58 45 38 58 58 58 58 45 39 58 58 54 51 58 54 52 58 58 43 54 58 46 41 58 58 58 35 49 50 49 48 49 49 54 51 58 58 51 50 58 50 58 58 49 58 58 39 48 58 51 52 51 53 53 52 58 51 53 51 58 51 50 54 58 51 52 58 51 58 46 52 47 44 50 54 54 27 40 32 47 39 53 51 41 49 38 27 41 49 47 50 44 43 44 51 31 58 28 29 41 43 31 41 32 51 39 39 32 47 49 40 54 41 38 35 45 52 44 49 40 54 49 39 39 53 42 54 50 52 40 42 36 46 49 54 54 50 40 53 53 32 51 49 54 44 32 54 35 35 41 40 49 37 33 24 47 32 33 31 40 53 54 40 54 47 28 22 27 37 39 34 37 45 47 22 33 35 46 33 47 36 49 40 35 33 18 54 51 41 54 47 51 24 53 40 47 46 29 32 31 33 22 32 29 33 47 36 38 31 12 38 51 34 37 51 33 52 36 53 51 33 30 32 35 40 38 32 52 53 42 52 33 34 33 42 31 31 51 15 33 29 31 45 51 45 43 42 31 28 31 33 27 12 33 30 31 35 31 38 33 37 31 28 29 39 45 28 15 18 40 27 31 24 41 26 35 47 46 18 30 32 41 31 33 36 29 33 27 42 32 38 31 31 28 32 31 31 31 26 43 34 46 31 32 30 32 31 34 30 26 21 29 29 18 27 22 19 27 32 37 26 31 27 30 31 43 32 28 27 21 33 32 16 46 46 36 31 22 23 31 25 46 12 8 9 31 21 28 13 22 20 24 24 31 31 29 26 32 31 30 24 23 27 34 32 37 31 18 29 31 16 26 24 34 19 20 27 19 38 9 35 41 5 5 10 31 36 6 6 17 32 39 34 21 18 10 11 17 17 43 17 30 34 23 9 8 19 33 30 28 23 23 22 24 21 12 23 31 21 32 31 16 21 15 19 48 12 22 18 37 29 23 24 22 27 32 22 13 43 30 19 31 14 30 16 6 9 17 19 21 12 6 7 24 9 22 28 21 11 20 10 20 47 17 19 23 23 16 21 15 11 33 23 5 6 18 12 26 14 16 8 13 30 15 5 12 24 25 28 27 8 10 7 10 11 11 15 21 5 5 3 9 13 5 3 5 8 13 6 3 2 4 5 9 9 22 18 6 7 14 14 10 17 23 23 11 16 12 18 10 5 6 13 15 8 6 8 11 18 23 14 9 7 23 8 6 19 7 9 20 16 15 15 10 6 8 5 5 23 6 13 29 24 4 11 18 6 3 3 2 4 7 4 8 6 3 2 3 4 6 6 9 6 16 16 13 7 5 10 5 4 6 4 5 8 7 2 3 1 3 5 11 5 2 3 3 5 5 4 3 1 5 4 5 17 19 10 4 2 5 6 5 4 16 4 16 10 24 6 3 2 2 7 12 5 7 8 14 14 16 3 2 5 7 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_52034912_52035953
seq2: B6Ng01-318J22.b_46_1095 (reverse)

seq1  TTTTTCTG-CCATTTCCTTTTTA-TCTGACAATTCTCCCAGAGCTTATCA  48
      |||||||| ||||||| |||||| |||||| ||||| |||||||||||||
seq2  TTTTTCTGCCCATTTCTTTTTTATTCTGAC-ATTCT-CCAGAGCTTATCA  48

seq1  T-GGCTCCCTTGATTAAT-ATAG-CCAGCATCAGTTCCTGTGGCTTAATT  95
      | |||||||||||||||| |||| ||||||||||||||||||||||||||
seq2  TGGGCTCCCTTGATTAATAATAGCCCAGCATCAGTTCCTGTGGCTTAATT  98

seq1  CAAACCACTAGCCAAC-AAGGAGG--AGAATTAGCAGCTTAGTCTTTATG  142
      |||||||||||||||| |||||||   |||||||||||||||||||||||
seq2  CAAACCACTAGCCAACAAAGGAGGGAGGAATTAGCAGCTTAGTCTTTATG  148

seq1  T-CCCCCCAAACTCATATG-TAGGAATATTATCTGTCTGCTTATTGTCCT  190
      | ||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCCCCCCCAAACTCATATGTTAGGAATATTATCTGTCTGCTTATTGTCCT  198

seq1  TAGTTCCCTACCTGTGGTTTAAAATCACCTTCCCTCTACAAGTCACTCGA  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCCCTACCTGTGGTTTAAAATCACCTTCCCTCTACAAGTCACTCGA  248

seq1  GGTTCTGGTCATTGGATTTCATTTTGTATAGCCAACCTCCTTCCCAAAAC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGGTCATTGGATTTCATTTTGTATAGCCAACCTCCTTCCCAAAAC  298

seq1  ACTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  348

seq1  TGTGTGTGTGTATAATTGACACACAAGTCAAGAACCAAGGACCTGCATCC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTATAATTGACACACAAGTCAAGAACCAAGGACCTGCATCC  398

seq1  TCTGGATATCATCATTTTGTCATATTGCTGGCATACAAACAAAAAAATAA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATATCATCATTTTGTCATATTGCTGGCATACAAACAAAAAAATAA  448

seq1  ATAAACAGCTTCACATATGTGCAGTTTCCTTTTCAGCTTACACGGTAACA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAGCTTCACATATGTGCAGTTTCCTTTTCAGCTTACACGGTAACA  498

seq1  TAAAATACCAGAGCCAACCAAGGAAGAAGAACACAGAGAAATGACTGCTG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATACCAGAGCCAACCAAGGAAGAAGAACACAGAGAAATGACTGCTG  548

seq1  AGACATTCCCCTCTACGTCTCTTCTGGAAGCTACTGGGACCAACTGGGCA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTCCCCTCTACGTCTCTTCTGGAAGCTACTGGGACCAACTGGGCA  598

seq1  CAGGAGGGAAACTAGAATGGGTAAAAGAAAACTGGTCCTGGAGGGCAGAA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGGAAACTAGAATGGGTAAAAGAAAACTGGTCCTGGAGGGCAGAA  648

seq1  CTAGCATCATCGTTAACTACAGAGAGGAGTAAGGGTGAGGCAGAGGGTTT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCATCATCGTTAACTACAGAGAGGAGTAAGGGTGAGGCAGAGGGTTT  698

seq1  CAGAAAGAGAAAGGGCACAGGTTCAAACCTCACCAAGGATACTAGTAGCC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAGAAAGGGCACAGGTTCAAACCTCACCAAGGATACTAGTAGCC  748

seq1  AAGGTCCTAGGTCCTGTTGTATGCAGATGTGCTGGAAATTTGTGAGGCTT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCCTAGGTCCTGTTGTATGCAGATGTGCTGGAAATTTGTGAGGCTT  798

seq1  CTCCATGTGAATTATTTTTAAATGTTATCAGCATCTCATGTTTATAATCA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGTGAATTATTTTTAAATGTTATCAGCATCTCATGTTTATAATCA  848

seq1  GTTCTGTTTTGCTTTGTTCGGATTTGTTTAATCACAGAGAGGCTGGCAGC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTTTTGCTTTGTTCGGATTTGTTTAATCACAGAGAGGCTGGCAGC  898

seq1  AGACTCTTAGAGTAGTTTTCTTTGAGGCCATAAAGAAATGAGGAAAGGAA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTTAGAGTAGTTTTCTTTGAGGCCATAAAGAAATGAGGAAAGGAA  948

seq1  GGCCAAGGGTTGGACAAGAGTAACTGAATTTCAAAATGAATAAAATAGAA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGGGTTGGACAAGAGTAACTGAATTTCAAAATGAATAAAATAGAA  998

seq1  CGTCAGAAGAGGTGGGGGCAAAACTATTGGATCAAGACAAGGGTGAGAAT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCAGAAGAGGTGGGGGCAAAACTATTGGATCAAGACAAGGGTGAGAAT  1048

seq1  TC  1042
      ||
seq2  TC  1050

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Alignment Information