BAC Information

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BAC

Clone NameB6Ng01-319G05
Chromosome5 (Build37)
Map Location 118,180,256 - 118,331,493
singlet/doubletdoublet
Overlap geneNos1
Upstream geneGm1684, LOC665073, Suds3, Taok3, Pebp1, LOC100042313, LOC100039359, BC023744, LOC667175, Wsb2, Rfc5, Ksr2
Downstream geneFbxo21, Tesc, Fbxw8, Hrk, Tmem118, 2410131K14Rik, LOC665162, Thrap2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319G05.bB6Ng01-319G05.g
ACCGA109031GA109032
length534695
definitionB6Ng01-319G05.b B6Ng01-319G05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,180,256 - 118,180,795)(118,330,802 - 118,331,493)
sequence
tctaatcgccctggagttgagagcttaaaaggggccgtgggaggcacgtg
aacctgccttgtgatttcaagtctctgggaaattggcaaaagcttacatt
ttgttcctgcacctgctaaattggcttttggggggactgacaggactttc
gatggaaacagattaacaaggtgaagctcggtggctaatggaaatatacg
gaataaggattacaaggagggtttctttttccttttttttcacctagctc
gtagggatgcgacagtctcttggggcacagtaccagttgtctctaatctc
tctggacacttatcttctgttttgaaatgatgaagaggggaggtcacatt
ctcatggtgactagcttgctatctgggacaagctagagaaagctattaac
ggaaaaaaaaaacatgaaattgaatcttgctaagcagagcttcccattcg
tctgtagttccttcagagctgcccccacagcctggttttatgagaatgga
gatgaccatgggcattgggggtgggggtggggga
gaattcccccacatcccctgcttcctcgttagccagcagcagccaaggga
caccacttgcgctgctgccgccgctgcggctcaggcttggctcatcctcc
tctgaagccttgcagaaaggcccggagtcctggctcagatggactgagag
gctccgttggtgtacaggtgctgagaagagggggtgcagcttcccctcct
tccagacatcccataagtcaccccactcctgctgctagggggtgaggagg
gattggtgggaaacatgggctcttctcaagggtcactctggcctggccca
ttggctgcccaggcaagagagatgaggtgaggctgctgatctccagccaa
acccaggcagtcttagaaagggatggtgactcagctgtcagcacacatct
cagcagactggcaaggactgaaacacttggtaacagatggagctggcgag
gctgtgggcaaacagccccaccccccaccccctggcacttttctggtaag
atgggcacagccactgggttgtaaatgtaaatggcttttgacttaacttt
aacacttctaggaattttttttctctccccggttaagtcctattcgcatg
ccaaatgagggatctagacaatgctacatggtgacagacaacatagtcac
atcctaagagtggcaattagcccaagttctattatggataactta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_118180256_118180795
seq2: B6Ng01-319G05.b_48_587

seq1  GAATTCTCTAATCGCCCTGGAGTTGAGAGCTTAAAAGGGGCCGTGGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAATCGCCCTGGAGTTGAGAGCTTAAAAGGGGCCGTGGGAGG  50

seq1  CACGTGAACCTGCCTTGTGATTTCAAGTCTCTGGGAAATTGGCAAAAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGAACCTGCCTTGTGATTTCAAGTCTCTGGGAAATTGGCAAAAGCT  100

seq1  TACATTTTGTTCCTGCACCTGCTAAATTGGCTTTTGGGGGGACTGACAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTGTTCCTGCACCTGCTAAATTGGCTTTTGGGGGGACTGACAGG  150

seq1  ACTTTCGATGGAAACAGATTAACAAGGTGAAGCTCGGTGGCTAATGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCGATGGAAACAGATTAACAAGGTGAAGCTCGGTGGCTAATGGAAA  200

seq1  TATACGGAATAAGGATTACAAGGAGGGTTTCTTTTTCCTTTTTTTTCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACGGAATAAGGATTACAAGGAGGGTTTCTTTTTCCTTTTTTTTCACC  250

seq1  TAGCTCGTAGGGATGCGACAGTCTCTTGGGGCACAGTACCAGTTGTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCGTAGGGATGCGACAGTCTCTTGGGGCACAGTACCAGTTGTCTCT  300

seq1  AATCTCTCTGGACACTTATCTTCTGTTTTGAAATGATGAAGAGGGGAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTCTGGACACTTATCTTCTGTTTTGAAATGATGAAGAGGGGAGGT  350

seq1  CACATTCTCATGGTGACTAGCTTGCTATCTGGGACAAGCTAGAGAAAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCTCATGGTGACTAGCTTGCTATCTGGGACAAGCTAGAGAAAGCT  400

seq1  ATTAACGGAAAAAAAAAACATGAAATTGAATCTTGCTAAGCAGAGCTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACGGAAAAAAAAAACATGAAATTGAATCTTGCTAAGCAGAGCTTCC  450

seq1  CATTCGTCTGTAGTTCCTTCAGAGCTGCCCCCACAGCCTGGTTTTATGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCGTCTGTAGTTCCTTCAGAGCTGCCCCCACAGCCTGGTTTTATGAG  500

seq1  AATGGAGATGACCATGGGCATTGGGGGTGGGGGTGGGGGA  540
      ||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGATGACCATGGGCATTGGGGGTGGGGGTGGGGGA  540

seq1: chr5_118330802_118331493
seq2: B6Ng01-319G05.g_68_762 (reverse)

seq1  TAAGTTGTCCATAATAGACACTTGGGCT-ATTGCCACTCTTTGGCTGTGA  49
      |||||| ||||||||||| ||||||||| |||||||||||| || |||||
seq2  TAAGTTATCCATAATAGA-ACTTGGGCTAATTGCCACTCTTAGGATGTGA  49

seq1  CTGTGTTGTCTGTC-CCATGTAGCATTGTCTAGATCCCTCATTTGGCATG  98
      || ||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTATGTTGTCTGTCACCATGTAGCATTGTCTAGATCCCTCATTTGGCATG  99

seq1  CGAATA-GACTTAACC-GGGAGAGAAAAAAAATTCCTAGAAGTGTTAAAG  146
      |||||| ||||||||| |||||||||||||||||||||||||||||||||
seq2  CGAATAGGACTTAACCGGGGAGAGAAAAAAAATTCCTAGAAGTGTTAAAG  149

seq1  TTAAGTCAAAAGCCATTTACATTTACAACCCAGTGGCTGTGCCCATCTTA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTCAAAAGCCATTTACATTTACAACCCAGTGGCTGTGCCCATCTTA  199

seq1  CCAGAAAAGTGCCAGGGGGTGGGGGGTGGGGCTGTTTGCCCACAGCCTCG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAAGTGCCAGGGGGTGGGGGGTGGGGCTGTTTGCCCACAGCCTCG  249

seq1  CCAGCTCCATCTGTTACCAAGTGTTTCAGTCCTTGCCAGTCTGCTGAGAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCCATCTGTTACCAAGTGTTTCAGTCCTTGCCAGTCTGCTGAGAT  299

seq1  GTGTGCTGACAGCTGAGTCACCATCCCTTTCTAAGACTGCCTGGGTTTGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTGACAGCTGAGTCACCATCCCTTTCTAAGACTGCCTGGGTTTGG  349

seq1  CTGGAGATCAGCAGCCTCACCTCATCTCTCTTGCCTGGGCAGCCAATGGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGATCAGCAGCCTCACCTCATCTCTCTTGCCTGGGCAGCCAATGGG  399

seq1  CCAGGCCAGAGTGACCCTTGAGAAGAGCCCATGTTTCCCACCAATCCCTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCAGAGTGACCCTTGAGAAGAGCCCATGTTTCCCACCAATCCCTC  449

seq1  CTCACCCCCTAGCAGCAGGAGTGGGGTGACTTATGGGATGTCTGGAAGGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCCCTAGCAGCAGGAGTGGGGTGACTTATGGGATGTCTGGAAGGA  499

seq1  GGGGAAGCTGCACCCCCTCTTCTCAGCACCTGTACACCAACGGAGCCTCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGCTGCACCCCCTCTTCTCAGCACCTGTACACCAACGGAGCCTCT  549

seq1  CAGTCCATCTGAGCCAGGACTCCGGGCCTTTCTGCAAGGCTTCAGAGGAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCATCTGAGCCAGGACTCCGGGCCTTTCTGCAAGGCTTCAGAGGAG  599

seq1  GATGAGCCAAGCCTGAGCCGCAGCGGCGGCAGCAGCGCAAGTGGTGTCCC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGCCAAGCCTGAGCCGCAGCGGCGGCAGCAGCGCAAGTGGTGTCCC  649

seq1  TTGGCTGCTGCTGGCTAACGAGGAAGCAGGGGATGTGGGGGAATTC  692
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGCTGCTGGCTAACGAGGAAGCAGGGGATGTGGGGGAATTC  695