BAC Information

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BAC

Clone NameB6Ng01-320K24
Chromosome5 (Build37)
Map Location 120,759,278 - 120,760,306
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039529, LOC100039542, Tbx3, EG433945, Tbx5, Rbm19
Downstream geneLOC100039609, Lhx5, Sdsl, Sds, 1300012G16Rik, Slc24a6, Tpcn1, Iqcd, 1110008J03Rik, Ddx54, LOC546886, Rasal1, Dtx1, Oas2, Oas3, Oas1e, Oas1c, Oas1b, Oas1f, Oas1h, Oas1g, Oas1a, Oas1d, Oas1i, Rph3a, LOC665299, Ptpn11, Rpl6, LOC100039686, EG545802, AU042671
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320K24.bB6Ng01-320K24.g
ACCGA109995GA109996
length7891,027
definitionB6Ng01-320K24.b B6Ng01-320K24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatggcaatcctactgtctcagcctccggggtgctgagattacag
gtgtaccagcacttggcttgttctattacttaatctcttttctttctttt
ttttctctcatcaatttatttattcaatttacagcctgattacagccccc
tgcctcctcccctcccagtcccatcctcccacccctccccagtccccatc
cccttttcctcaaagaagaggagttcccttgtggtaccagtccaccctgg
cacatcaagtcacagtaggattaagtacacccccccccccccggggccag
acaaggcagcccagctatgggaaagggatccaaaggcaggcaacagagtc
agagacagcctctactctaattgttaagggacccacatgaaaaacaaatt
gcacatatttttttttcttttaagaaagatttagtttgacatggtggtgc
atgcctttaatcctagcacttgggagtctgaggcaggaagatctctttga
gttcaagaccagcctgatctacatagtgaattccaagtcagccagggtta
tatagggagaccctgcacccctcctatgatgatgatgatgatgatgatgg
tttttggagactgggtttctctgtgcagccctggctgccctggaactcta
tatagactgggctggcctggaactcactgagatttgcttgcctctgtctc
tcatgtgctgggataaaggtgtgcatcaccccatccccagcttattttat
tttttattattttttggattttttggttttttcaagaaa
gaattcactctgtagaccaggctgggctcgaactcagaaatccgcctgcc
tctgcttcccgagtgctaggattaaagtcatgcatcgtcactgccctgct
atgatcaaagttcttgaatcagataaaatacaacattgttgacaagaaag
tttaaaaagtgttagggttaaaaaggcagggggatactaacaaaaagatc
aggctgatgtaaccgtatgtatatcatacacaatgaatctaaagaaaaaa
gacactagaaacagtagatgccctatagatgtttgttgattgaatggttg
ttgtcagctttggataagaacttaatgtataactcgtgtcagctgatttg
ctgctatgcatagaccagacaatctcctcacctcccaagggtctttttat
tcactggtgctcacagattcagctgggctggaccgtgagctccaagaatc
acccctcctttttacatgtcaaacttggggtccacatatggaccttcaca
cccagccatctccccagcctgacactggaggtactaagtgcgtactacta
ctaggtggtgaaagagaagtctgatcatggggtctagatcacaggattct
actcatgagatgtcctagaacatacaaaggcatagagaccaggagtaaac
ctcaaggctcactatgggctcagggctcagactgagagctgactcaagca
cagggaatttttagtacagtaaaattatttcataggatgctgggctggtg
ggtgaaaggctccatgactatgcaaaacctgtggaacttcctagaacaaa
atgaggtcccagtgcacccacattttaaagttattaggggttaggggatg
cataacgtgacaagtaatccccgttagacgtgtgtgaaacaacgctggag
ggcctggggtaacatggcagccaagtgactttggatgtaaatgacatttg
taatggctgaaggactcccccatgagcataatcttgcttgatatcgtttt
tcccacaagggcatcagggattgttcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_120759278_120760306
seq2: B6Ng01-320K24.g_66_1092

seq1  GAATTCACTCTGTAGACCAGGCTGGGCTCGAACTCAGAAATCCGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGGGCTCGAACTCAGAAATCCGCCTGCC  50

seq1  TCTGCTTCCCGAGTGCTAGGATTAAAGTCATGCATCGTCACTGCCCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCCCGAGTGCTAGGATTAAAGTCATGCATCGTCACTGCCCTGCT  100

seq1  ATGATCAAAGTTCTTGAATCAGATAAAATACAACATTGTTGACAAGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCAAAGTTCTTGAATCAGATAAAATACAACATTGTTGACAAGAAAG  150

seq1  TTTAAAAAGTGTTAGGGTTAAAAAGGCAGGGGGATACTAACAAAAAGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAGTGTTAGGGTTAAAAAGGCAGGGGGATACTAACAAAAAGATC  200

seq1  AGGCTGATGTAACCGTATGTATATCATACACAATGAATCTAAAGAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGATGTAACCGTATGTATATCATACACAATGAATCTAAAGAAAAAA  250

seq1  GACACTAGAAACAGTAGATGCCCTATAGATGTTTGTTGATTGAATGGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTAGAAACAGTAGATGCCCTATAGATGTTTGTTGATTGAATGGTTG  300

seq1  TTGTCAGCTTTGGATAAGAACTTAATGTATAACTCGTGTCAGCTGATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGCTTTGGATAAGAACTTAATGTATAACTCGTGTCAGCTGATTTG  350

seq1  CTGCTATGCATAGACCAGACAATCTCCTCACCTCCCAAGGGTCTTTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTATGCATAGACCAGACAATCTCCTCACCTCCCAAGGGTCTTTTTAT  400

seq1  TCACTGGTGCTCACAGATTCAGCTGGGCTGGACCGTGAGCTCCAAGAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGTGCTCACAGATTCAGCTGGGCTGGACCGTGAGCTCCAAGAATC  450

seq1  ACCCCTCCTTTTTACATGTCAAACTTGGGGTCCACATATGGACCTTCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTCCTTTTTACATGTCAAACTTGGGGTCCACATATGGACCTTCACA  500

seq1  CCCAGCCATCTCCCCAGCCTGACACTGGAGGTACTAAGTGCGTACTACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCATCTCCCCAGCCTGACACTGGAGGTACTAAGTGCGTACTACTA  550

seq1  CTAGGTGGTGAAAGAGAAGTCTGATCATGGGGTCTAGATCACAGGATTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTGGTGAAAGAGAAGTCTGATCATGGGGTCTAGATCACAGGATTCT  600

seq1  ACTCATGAGATGTCCTAGAACATACAAAGGCATAGAGACCAGGAGTAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGAGATGTCCTAGAACATACAAAGGCATAGAGACCAGGAGTAAAC  650

seq1  CTCAAGGCTCACTATGGGCTCAGGGCTCAGACTGAGAGCTGACTCAAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGCTCACTATGGGCTCAGGGCTCAGACTGAGAGCTGACTCAAGCA  700

seq1  CAGGGAATTTTTAGTACAGTAAAATTATTTCATAGGATGCTGGGCTGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAATTTTTAGTACAGTAAAATTATTTCATAGGATGCTGGGCTGGTG  750

seq1  GGTGAAAGGCTCCATGACTATGCAAAACCTGTGGAACTTCCTAGAACAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAAGGCTCCATGACTATGCAAAACCTGTGGAACTTCCTAGAACAAA  800

seq1  ATGAGGTCCCAGTGCACCCACATTTTAAAGTTATTAGGGGTTAGGGGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTCCCAGTGCACCCACATTTTAAAGTTATTAGGGGTTAGGGGATG  850

seq1  CATAACGTGACAAAGTAATCCCCGTTAGACGTGTGTGAAACAACGCTGGA  900
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CATAACGTGAC-AAGTAATCCCCGTTAGACGTGTGTGAAACAACGCTGGA  899

seq1  GGGCCTGGGGTAACATGGCAGCCAAGTGACTTTGGATGTAAATGACATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTGGGGTAACATGGCAGCCAAGTGACTTTGGATGTAAATGACATTT  949

seq1  GTAATGGCTGAAGGGACT-CCCCATGAGCATAATCTTGCTTGATAATCGT  999
      |||||||||||| ||||| ||||||||||||||||||||||||| |||||
seq2  GTAATGGCTGAA-GGACTCCCCCATGAGCATAATCTTGCTTGAT-ATCGT  997

seq1  TTTTCCCACAAGGGCATCAGGGATTGTTCG  1029
      ||||||||||||||||||||||||||||||
seq2  TTTTCCCACAAGGGCATCAGGGATTGTTCG  1027