BAC Information

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BAC

Clone NameB6Ng01-321E10
Chromosome5 (Build37)
Map Location 50,509,186 - 50,509,955
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041659, EG433885, LOC666223, Gpr125
Downstream geneEG637307, LOC100041015, LOC242987, EG624734, LOC666265
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321E10.bB6Ng01-321E10.g
ACCGA110429GA110430
length1,1551,226
definitionB6Ng01-321E10.b B6Ng01-321E10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaatttcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
cttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacaaagtttggagctgagataaaaggat
ggaccatgtagagactgccatatccagggatccaccccataatcagcatc
caaatgctgacaccattgcatatactagcaagattttatcgaaaggaccc
agatgtagctgtctcttgtgagactatgctggggcctagcaaacacataa
gtggatgctcacagtcagctaatggatggatcacagggctcccaatgcag
agctagagaaagtacccaaggagctaaagggatctgcaccctataggtgg
aacatatatgaactaacgagtaccccggagctctgactctagctgcatat
gtatcaaaagatgcctagtcgccatcactgcaagaagagtccatgacacc
gcaaactttatatgcccagttacaggggaatgccaggtccaaaagggggg
agtgg

gaattccttttctggtccagtctatttggagttctttaggtttcttgtat
attcatgggcatgccattctttaggtttgggaagttttcttctataattt
tgttgaagatattttctagccctttaagatgaaaatcttcattctcatct
actcctattatccgtaggtttggtcttctcattgtgtcctggatttcctg
gatgttttgagttagcatatttttgcatttcgcattttctttgattgttt
tgctgatgttctctatggaatcttctgcagctgagattctcacttccatc
tctagtattctgttgtggatgctcacatctatggttccagatttctttcc
tagggtttctatctcctgggttgcctcactttgggttttctttattgtgt
ctacttcccttttgaggtctagtatgcttttgtccatttccatcacctgt
ttggctgtgttgtcctgtttttctttaaggacttgtaactctttagcagt
gttctcctgtatttctttaagtgagttatttaagtccttcttgatgtcct
ctaccatcatcatgagatatggtttttaatctgggcctacctttctggtg
tgttggggtatccaggtctggctgaggtgggagtgctgttttctgatgat
ggtgagtggtcttggtttctgttagtaagattcttacgtttgccttttgc
catctggtaatctctggagttagttgttatagttgtctctggttagagct
tgttcctctcatgattctgttagcctctatcagcagacctggtagactag
atttctcctgagtttcagtggttagagcactctctgcagacaagatctcc
tcttgcagttaaggtagacagatatctggcgttcggacctgcctcctggc
agaagatgaagccctgaaacaggcctgtcccagaagctgttagcttatgt
atccactataatatttggccatcttgtggttttccagtgaagcaggctat
ttttgtttcataagaatgtggcgatatgtatttctactctacttacttcc
accattgaacaccctccattctgctgtgtttcttgaatctttcaactaat
gtaaataaggtcataaataaaatatctttcctaaccctctccaaattcat
ttttccatggtaattgtggcagaatgttccttgccagactttcagacatg
cctttgggagacaaccaccaagataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_50509186_50509955
seq2: B6Ng01-321E10.g_527_1292

seq1  TGTCCTGTTTTTCTTTAAGGACTTGTAACTCTTTAGCAGTGTTCTCCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGTTTTTCTTTAAGGACTTGTAACTCTTTAGCAGTGTTCTCCTGT  50

seq1  ATTTCTTTAAGTGAGTTATTTAAGTCCTTCTTGATGTCCTCTACCATCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTAAGTGAGTTATTTAAGTCCTTCTTGATGTCCTCTACCATCAT  100

seq1  CATGAGATATGGTTTTTAATCTGGGCCTACCTTTCTGGTGTGTTGGGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGATATGGTTTTTAATCTGGGCCTACCTTTCTGGTGTGTTGGGGTA  150

seq1  TCCAGGTCTGGCTGAGGTGGGAGTGCTGTTTTCTGATGATGGTGAGTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTCTGGCTGAGGTGGGAGTGCTGTTTTCTGATGATGGTGAGTGGT  200

seq1  CTTGGTTTCTGTTAGTAAGATTCTTACGTTTGCCTTTTGCCATCTGGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTTCTGTTAGTAAGATTCTTACGTTTGCCTTTTGCCATCTGGTAA  250

seq1  TCTCTGGAGTTAGTTGTTATAGTTGTCTCTGGTTAGAGCTTGTTCCTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGAGTTAGTTGTTATAGTTGTCTCTGGTTAGAGCTTGTTCCTCTC  300

seq1  ATGATTCTGTTAGCCTCTATCAGCAGACCTGGTAGACTAGATTTCTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCTGTTAGCCTCTATCAGCAGACCTGGTAGACTAGATTTCTCCTG  350

seq1  AGTTTCAGTGGTTAGAGCACTCTCTGCAGACAAGATCTCCTCTTGCAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAGTGGTTAGAGCACTCTCTGCAGACAAGATCTCCTCTTGCAGTT  400

seq1  AAGGTAGACAGATATCTGGCGTTCGGACCTGCCTCCTGGCAGAAGATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAGACAGATATCTGGCGTTCGGACCTGCCTCCTGGCAGAAGATGAA  450

seq1  GCCCTGAAACAGGGCCTGTCCCAGAAGCTGTTAGCTTATGTATCCACTAT  500
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGAAACA-GGCCTGTCCCAGAAGCTGTTAGCTTATGTATCCACTAT  499

seq1  AATATTTGGCCATCTTGT-GTTTTCCAGTGAAGCAGGCTATTTTTGTTTC  549
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AATATTTGGCCATCTTGTGGTTTTCCAGTGAAGCAGGCTATTTTTGTTTC  549

seq1  ATAAGAATGTTGGCGATATGTATTTCTACTCTACTTACTTCCACCATTG-  598
      ||||||||| ||||||||||||||||||||||||||||||||||||||| 
seq2  ATAAGAATG-TGGCGATATGTATTTCTACTCTACTTACTTCCACCATTGA  598

seq1  ACA-CCTCCATTCTCGCTGTG-TTCTTGAATC-TTCCACT-ATGTTAATA  644
      ||| |||||||||| |||||| |||||||||| ||| ||| |||| ||||
seq2  ACACCCTCCATTCT-GCTGTGTTTCTTGAATCTTTCAACTAATGTAAATA  647

seq1  AGGGTCAT-AATAAAATATCTTTCCTAA-CCTCTCC-AATTCATTTTCTC  691
      | |||||| ||||||||||||||||||| ||||||| ||||||||||  |
seq2  A-GGTCATAAATAAAATATCTTTCCTAACCCTCTCCAAATTCATTTTTCC  696

seq1  ATTGTTATTGTGCAAGTATGTTCCTTTGTGCTGAGTCTTTCGAACCAATG  741
      || || ||||||  || ||||||||   |||  || |||||  ||  |||
seq2  ATGGTAATTGTGGCAGAATGTTCCT---TGC-CAGACTTTCAGAC--ATG  740

seq1  CCTTTGTGGGAAGACAACCACCAAGATAA  770
      |||||   || ||||||||||||||||||
seq2  CCTTT---GGGAGACAACCACCAAGATAA  766


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