BAC Information

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BAC

Clone NameB6Ng01-321L02
Chromosome5 (Build37)
Map Location 73,480,039 - 73,481,141
singlet/doubletsinglet
Overlap geneFryl
Upstream geneGabrb1, Commd8, Atp10d, Corin, Nfxl1, Zar1, EG545758, Cnga1, LOC384275, Npal1, Txk, Tec, Slain2, Slc10a4, LOC667127
Downstream geneOciad1, Ociad2, LOC667154, LOC100042205, C130090K23Rik, LOC627733, Dcun1d4, BC031901, Sgcb, Spata18, Usp46
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321L02.bB6Ng01-321L02.g
ACCGA110731GA110732
length6751,107
definitionB6Ng01-321L02.b B6Ng01-321L02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgcagttcacattctactgccgagagacattcattaaacaaca
aaaacgtatatgagctttttttttatttgggggggggggacccaaaaaga
tcaaccatgatagggatgctattttgtgaggtagcaataataaagatagt
aaacctaggtgacatttgagcagagacctaaatcatagaagtctgtcctg
gggttttctgggtgacccaaagattctagctagatgtgtctgtagccggt
ataaagccctggcagtagaaacctgtttgtctgttttgaagaccagctag
aaggttggtgtgggtagagcagaaacagggcatgggagatggtggtccgg
aagctacttatagaagttatcaagtatccaaagcaaggcaggtcaaagaa
aggactttggagttgaagatattggaaagcgacttctgggaggcttctga
tagcaacatgacttgcaggaaggatcttctggctactgtgtatccatcag
gctatctgtagcaaaggggatgtgtccattaaaagagaggggaggaaacc
acaggggagaacaagggcaatttgaaccatagtcctaagggtcccccagt
tgggaggtatttaaacctatttctgaatgcaaggcggcatgacctactta
agaaagtggattttggtgggtgaaa
gaattcttcccagactctgttttaaaaagattgctgtaagcctgtcatat
gcaggatgagtttctcttccctctctccagatatggctattttgttattt
taagtaaacgcatacaaacctttggctctcaagcacatgtgttgtatttt
taacagggtcctttaagttcataactaggcttgttaattttaaacatagg
agccttactttgttctttgaaaggaaaataatatgacttgagggtcaaga
gcatatttttcctctatgttttctgtgtgggaagtggcagatgtaagtgg
cacttgggaggcagaggcaggaagatttctgagttcgaggccagcctggt
ctacaaagtgagttcctggacagccagggctacacagagaaaccctgttt
cgagaaaaaaaaagcccttgtttagcaatgaatccatccccgttggtaat
acgttcatacgcagccaggaagaggccggtcctgactggagctcccagcc
agactccttgcggtatcctgccattaggctttaggcgtatccagaagcag
cttcctctctctatcccgcgtagctgacaagtcggcgtgcacaccagaac
gaaaggaaccggaagtaactcttgtctacctgtgctcgcatttccagtgc
accagaggagaagcatctttccccagcagagcctgcgtcacagcctgttc
atgttgttcagccactgggcgggcccctttagcatcatgttcacgcccct
ggacagatacagtgacaggaatatgcagatcaacagacaccagtactgtg
cgttaaaggtatctatcggcttagatcccgtgtcctccttaccacgctaa
gagtgctttctgtctctcgacatgtggtaccgtgcacagaaaaggatttt
cttccgagcaccgagggttagggtgtacatttcgtctgccacaccgggta
gccttgtttagggaccgaaaagacatgccaagggagttccaaaaatctct
taggcctttaacgttgtattccctaaggatttaggatccccacttagaaa
tatgttatgttccataattaagcctttctttctgtcttgtccttaagtgc
atagcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_73480039_73481141
seq2: B6Ng01-321L02.g_67_1173 (reverse)

seq1  TAGCTATGCACTTTAAAGACAAGACAGAAAGAAA-GCTTAATTAT-GAAC  48
      ||||||||||| |||| ||||||||||||||||| |||||||||| ||||
seq2  TAGCTATGCAC-TTAAGGACAAGACAGAAAGAAAGGCTTAATTATGGAAC  49

seq1  ATAACATATTTCTTAGTGGGGATCCTTAATTCTTTAGGAATACAACGTTA  98
      ||||||||||||| |||||||||||| ||| |||  ||||||||||||||
seq2  ATAACATATTTCTAAGTGGGGATCCTAAATCCTTAGGGAATACAACGTTA  99

seq1  AAAGCCTTAGAGATTTTTGGAACTCCTTTGCATTGTCTTTTCGGTCCCTA  148
      || |||| |||||||||||||||||| |||   |||||||||||||||||
seq2  AAGGCCTAAGAGATTTTTGGAACTCCCTTGGCATGTCTTTTCGGTCCCTA  149

seq1  AACAAGGCTACCC-GTGTGGCAGACG-AATGTACACCCTAACCCTCGGTG  196
      ||||||||||||| |||||||||||| |||||||||||||||||||||||
seq2  AACAAGGCTACCCGGTGTGGCAGACGAAATGTACACCCTAACCCTCGGTG  199

seq1  CTCGGAAG-AAATCCTTTTCTGTGCACGGTACCACATGTCGAGAGACAGA  245
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGAAGAAAATCCTTTTCTGTGCACGGTACCACATGTCGAGAGACAGA  249

seq1  AAGCACTCTTAGCGTGGTAAGGAGGACACGGGATCTAAGCCGATAGATAC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTCTTAGCGTGGTAAGGAGGACACGGGATCTAAGCCGATAGATAC  299

seq1  CTTTAACGCACAGTACTGGTGTCTGTTGATCTGCATATTCCTGTCACTGT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAACGCACAGTACTGGTGTCTGTTGATCTGCATATTCCTGTCACTGT  349

seq1  ATCTGTCCAGGGGCGTGAACATGATGCTAAAGGGGCCCGCCCAGTGGCTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCCAGGGGCGTGAACATGATGCTAAAGGGGCCCGCCCAGTGGCTG  399

seq1  AACAACATGAACAGGCTGTGACGCAGGCTCTGCTGGGGAAAGATGCTTCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACATGAACAGGCTGTGACGCAGGCTCTGCTGGGGAAAGATGCTTCT  449

seq1  CCTCTGGTGCACTGGAAATGCGAGCACAGGTAGACAAGAGTTACTTCCGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGTGCACTGGAAATGCGAGCACAGGTAGACAAGAGTTACTTCCGG  499

seq1  TTCCTTTCGTTCTGGTGTGCACGCCGACTTGTCAGCTACGCGGGATAGAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCGTTCTGGTGTGCACGCCGACTTGTCAGCTACGCGGGATAGAG  549

seq1  AGAGGAAGCTGCTTCTGGATACGCCTAAAGCCTAATGGCAGGATACCGCA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGCTGCTTCTGGATACGCCTAAAGCCTAATGGCAGGATACCGCA  599

seq1  AGGAGTCTGGCTGGGAGCTCCAGTCAGGACCGGCCTCTTCCTGGCTGCGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTCTGGCTGGGAGCTCCAGTCAGGACCGGCCTCTTCCTGGCTGCGT  649

seq1  ATGAACGTATTACCAACGGGGATGGATTCATTGCTAAACAAGGGCTTTTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACGTATTACCAACGGGGATGGATTCATTGCTAAACAAGGGCTTTTT  699

seq1  TTTTCTCGAAACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCAGGAACTCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCGAAACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCAGGAACTCA  749

seq1  CTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTTCCTGCCTCTGCCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTTCCTGCCTCTGCCT  799

seq1  CCCAAGTGCCACTTACATCTGCCACTTCCCACACAGAAAACATAGAGGAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTGCCACTTACATCTGCCACTTCCCACACAGAAAACATAGAGGAA  849

seq1  AAATATGCTCTTGACCCTCAAGTCATATTATTTTCCTTTCAAAGAACAAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGCTCTTGACCCTCAAGTCATATTATTTTCCTTTCAAAGAACAAA  899

seq1  GTAAGGCTCCTATGTTTAAAATTAACAAGCCTAGTTATGAACTTAAAGGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGCTCCTATGTTTAAAATTAACAAGCCTAGTTATGAACTTAAAGGA  949

seq1  CCCTGTTAAAAATACAACACATGTGCTTGAGAGCCAAAGGTTTGTATGCG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTAAAAATACAACACATGTGCTTGAGAGCCAAAGGTTTGTATGCG  999

seq1  TTTACTTAAAATAACAAAATAGCCATATCTGGAGAGAGGGAAGAGAAACT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTAAAATAACAAAATAGCCATATCTGGAGAGAGGGAAGAGAAACT  1049

seq1  CATCCTGCATATGACAGGCTTACAGCAATCTTTTTAAAACAGAGTCTGGG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGCATATGACAGGCTTACAGCAATCTTTTTAAAACAGAGTCTGGG  1099

seq1  AAGAATTC  1103
      ||||||||
seq2  AAGAATTC  1107