BAC Information

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BAC

Clone NameB6Ng01-322E20
Chromosome5 (Build37)
Map Location 59,235,094 - 59,236,218
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041385
Downstream geneLOC100041396, LOC666499, EG625870, LOC100041425
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322E20.bB6Ng01-322E20.g
ACCGA111176GA111177
length1,1391,192
definitionB6Ng01-322E20.b B6Ng01-322E20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatcttgtcgtatcctattatgaaaatatagagtgggctattta
aagtgaaaacatgtaaacatgtcagggtttctctcttacacataagcctg
cctgtatctttgcctttcatgctgtgtcagtgagaagaaaggtcactcca
tcgacagggttggattttcaaattatgaagcttctgatatcctctgattc
ctcaatgttttcattacatcaggttgaatcaaatggttgtgtgtacacaa
gaatagagatgaaatataaacactggaaagttttttttttttaaggctaa
ttagtaatggagaaaatagagagaagagggatgctcagatggcttagagg
gtgaaaacacttgcctgagtttgaactatggtatccacaacacaaggtta
ttctctgacctccaaaaatatagtatggtgcacagacatacaaatgtgtg
tgtgcatcaacactttatataaataaaaattaaaaacaagacaaataaat
aataaatgtaaatacacagaggtggcaatgttatatttaaataatatgct
ttatactttcctgtttagaattctcagtggataaaaatatgattctaatt
attatatacttgtgttaacagtttatttttagaatgtgccaaaagaataa
gttaattttttagtatattgagtgttttttaatgcataggatttttaatg
catatttttacctgtttgatttttagaaatattattagagcaacaccttt
ttacatatttagaccctttgcttagcaagcaaatgagtcaaaacttaaat
tatgttttgatcataatcagttataatttcagagaaaataatattggatt
ttgtatattttatttatttttattttttaaattggttattttatttattt
atatctcaaatgttatccttgcttcccagtttctcctatgcaaacctcta
ttccccttcccttcccccatgcttctaaggagggtgcttcccccacccaa
ctcactcaactctacctcaacgccctagcatttcatcaattgctgaggca
tcagccttccacaggtaccaaaggtatacccctacaattgatggcagata
agccattctttgctatcataattcaagctggaagtcata

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagttgatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacacagatgtagctgtctcttgtgagactatgccggggcctcagcaaa
cacagaagtggatgctcacagtcagctaattggatgggatcaatagggct
cccaatggaggagctagagaaagtagccaaggagctatgggatctgcaac
cctatagtggaacaacattatgagctaacagtacccggagctcttgactc
tagctgcatatatattcaaaaagatgcctagtcgtcatcacttgaagaaa
aggtccattgactgcaacttatatgcccagtacatggcattcaatgtcaa
aagggaaaggtttggtcatgggcaatgtgggccgtaacaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_59235094_59236218
seq2: B6Ng01-322E20.b_46_1184

seq1  GAATTCAATCTTGTCGTATCCTATTATGAAAATATAGAGTGGGCTATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCTTGTCGTATCCTATTATGAAAATATAGAGTGGGCTATTTA  50

seq1  AAGTGAAAACATGTAAACATGTCAGGGTTTCTCTCTTACACATAAGCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAAACATGTAAACATGTCAGGGTTTCTCTCTTACACATAAGCCTG  100

seq1  CCTGTATCTTTGCCTTTCATGCTGTGTCAGTGAGAAGAAAGGTCACTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATCTTTGCCTTTCATGCTGTGTCAGTGAGAAGAAAGGTCACTCCA  150

seq1  TCGACAGGGTTGGATTTTCAAATTATGAAGCTTCTGATATCCTCTGATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACAGGGTTGGATTTTCAAATTATGAAGCTTCTGATATCCTCTGATTC  200

seq1  CTCAATGTTTTCATTACATCAGGTTGAATCAAATGGTTGTGTGTACACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATGTTTTCATTACATCAGGTTGAATCAAATGGTTGTGTGTACACAA  250

seq1  GAATAGAGATGAAATATAAACACTGGAAAG-TTTTTTTTTTTAAGGCTAA  299
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAATAGAGATGAAATATAAACACTGGAAAGTTTTTTTTTTTTAAGGCTAA  300

seq1  TTAGTAATGGAGAAAATAGAGAGAAGAGGGATGCTCAGATGGCTTAGAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAATGGAGAAAATAGAGAGAAGAGGGATGCTCAGATGGCTTAGAGG  350

seq1  GTGAAAACACTTGCCTGAGTTTGAACTATGGTATCCACAACACAAGGTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAACACTTGCCTGAGTTTGAACTATGGTATCCACAACACAAGGTTA  400

seq1  TTCTCTGACCTCCAAAAATATAGTATGGTGCACAGACATACAAATGTGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGACCTCCAAAAATATAGTATGGTGCACAGACATACAAATGTGTG  450

seq1  TGTGCATCAACACTTTATATAAATAAAAATTAAAAACAAGACAAATAAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATCAACACTTTATATAAATAAAAATTAAAAACAAGACAAATAAAT  500

seq1  AATAAATGTAAATACACAGAGGTGGCAATGTTATATTTAAATAATATGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATGTAAATACACAGAGGTGGCAATGTTATATTTAAATAATATGCT  550

seq1  TTATACTTTCCTGTTTAGAATTCTCAGTGGATAAAAATATGATTCTAATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTTTCCTGTTTAGAATTCTCAGTGGATAAAAATATGATTCTAATT  600

seq1  ATTATATACTTGTGTTAACAGTTTATTTTTAGAATGTGCCAAAAGAATAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATACTTGTGTTAACAGTTTATTTTTAGAATGTGCCAAAAGAATAA  650

seq1  GTTAATTTTTTAGTATATTGAGTGTTTTTTAATGCATAGGATTTTTAATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTTTTTAGTATATTGAGTGTTTTTTAATGCATAGGATTTTTAATG  700

seq1  CATATTTTTACCTGTTTGATTTTTAGAAATATTATTAGAGCAACACC-TT  748
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CATATTTTTACCTGTTTGATTTTTAGAAATATTATTAGAGCAACACCTTT  750

seq1  TTACATATTTAGACCCTTTGCTTAGCAAGCAAATGAGTCAAAACTTAAAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATATTTAGACCCTTTGCTTAGCAAGCAAATGAGTCAAAACTTAAAT  800

seq1  TATGTTTTGATCATAATCAGTTATAATTTCAGAGAAAATAATATTGGATT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTTGATCATAATCAGTTATAATTTCAGAGAAAATAATATTGGATT  850

seq1  TTGTATATTTTATTTATTTTTATTTTTT-AATTGGTTATTTTATTTATTT  897
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTGTATATTTTATTTATTTTTATTTTTTAAATTGGTTATTTTATTTATTT  900

seq1  ATATCTCAAATGTTATCC-TGCTTCCCAGTTTCTCCTATGCAAAACCTCT  946
      |||||||||||||||||| |||||||||||||||||||||| ||||||||
seq2  ATATCTCAAATGTTATCCTTGCTTCCCAGTTTCTCCTATGC-AAACCTCT  949

seq1  A-TCCCCTTCCCTTCCCCCATGCTTCTAA-GAGGGTGC-TCCCCCACCC-  992
      | ||||||||||||||||||||||||||| |||||||| |||||||||| 
seq2  ATTCCCCTTCCCTTCCCCCATGCTTCTAAGGAGGGTGCTTCCCCCACCCA  999

seq1  ACTCACTCACTCCTACCTCACCGCCCTAGCA-TTCATCAA-TGCTGAGGC  1040
      |||||||||   |||||||| |||||||||| |||||||| |||||||||
seq2  ACTCACTCAACTCTACCTCAACGCCCTAGCATTTCATCAATTGCTGAGGC  1049

seq1  ATCAGGCCTCCACAGG-ACCAAAGGTATA-CCCTACCATTGATGCCAGAT  1088
      ||||| | |||||||| |||||||||||| |||||| ||||||| |||||
seq2  ATCAGCCTTCCACAGGTACCAAAGGTATACCCCTACAATTGATGGCAGAT  1099

seq1  AAGGCCATCCTTTGCTA-CAT-ATTC-AGCTGG-AGTCATA  1125
      || ||||| |||||||| ||| |||| |||||| |||||||
seq2  AA-GCCATTCTTTGCTATCATAATTCAAGCTGGAAGTCATA  1139


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